BLASTX nr result

ID: Cnidium21_contig00014894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014894
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O24367.1|TUR2_SPIPO RecName: Full=Pleiotropic drug resistance...   150   1e-34
ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|NP_173005.1| ABC transporter G family member 40 [Arabidopsis...   149   2e-34
gb|AEB65936.1| ABCG subfamily transporter [Solanum tuberosum]         147   9e-34
ref|XP_002298123.1| pleiotropic drug resistance,  ABC transporte...   147   9e-34

>sp|O24367.1|TUR2_SPIPO RecName: Full=Pleiotropic drug resistance protein TUR2; Short=Protein
            Turion 2 gi|1514643|emb|CAA94437.1| PDR5-like ABC
            transporter [Spirodela polyrhiza]
          Length = 1441

 Score =  150 bits (378), Expect = 1e-34
 Identities = 72/119 (60%), Positives = 91/119 (76%)
 Frame = -3

Query: 358  SSRIDLFNAMGSMDTACLFLGVQNAASAQPVVDVERTVYYRERAAGMYSAVAYAFAQVLV 179
            S+ +DL NAMGSM  A LF+G+QNA + QP+VDVERTV+YRE+AAGMYSA+ YA+AQVL+
Sbjct: 1214 STSLDLINAMGSMYAAVLFIGIQNAQTVQPIVDVERTVFYREKAAGMYSALPYAYAQVLI 1273

Query: 178  EIPYILCQSLLYCLIVYAMIGFDWTFVKFGWXXXXXXXXXXXXXXFGMMTVAVTPNADI 2
            E+P+IL Q+LLY L+VY+MIGFDWT  KF W              +GMM VA+TPN+DI
Sbjct: 1274 EVPHILVQTLLYGLLVYSMIGFDWTAAKFLWYMFFMFFTFLYFTYYGMMAVAMTPNSDI 1332


>ref|XP_002324840.1| predicted protein [Populus trichocarpa] gi|222866274|gb|EEF03405.1|
            predicted protein [Populus trichocarpa]
          Length = 1429

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/118 (61%), Positives = 89/118 (75%)
 Frame = -3

Query: 355  SRIDLFNAMGSMDTACLFLGVQNAASAQPVVDVERTVYYRERAAGMYSAVAYAFAQVLVE 176
            +R D+FN+MGSM  A LF+GVQNA S QPVV +ERTV+YRERAAGMYSA+ YAFAQV++E
Sbjct: 1204 NRQDIFNSMGSMYAAVLFIGVQNATSVQPVVAIERTVFYRERAAGMYSALPYAFAQVMIE 1263

Query: 175  IPYILCQSLLYCLIVYAMIGFDWTFVKFGWXXXXXXXXXXXXXXFGMMTVAVTPNADI 2
            IPY+L Q+L+Y +IVY MIGFDWT  KF W              +GMMTVAVTPN ++
Sbjct: 1264 IPYVLVQTLIYGVIVYTMIGFDWTVSKFFWYIFFMYFTLLYMTFYGMMTVAVTPNHNV 1321


>ref|NP_173005.1| ABC transporter G family member 40 [Arabidopsis thaliana]
            gi|75336094|sp|Q9M9E1.1|AB40G_ARATH RecName: Full=ABC
            transporter G family member 40; Short=ABC transporter
            ABCG.40; Short=AtABCG40; AltName: Full=Pleiotropic drug
            resistance protein 12 gi|8072390|gb|AAF71978.1|AC013453_3
            Putative ABC transporter [Arabidopsis thaliana]
            gi|28144321|tpg|DAA00880.1| TPA_exp: PDR12 ABC
            transporter [Arabidopsis thaliana]
            gi|332191211|gb|AEE29332.1| ABC transporter G family
            member 40 [Arabidopsis thaliana]
          Length = 1423

 Score =  149 bits (376), Expect = 2e-34
 Identities = 76/118 (64%), Positives = 90/118 (76%)
 Frame = -3

Query: 355  SRIDLFNAMGSMDTACLFLGVQNAASAQPVVDVERTVYYRERAAGMYSAVAYAFAQVLVE 176
            +R DL NAMGSM TA LFLG+QNAAS QPVV+VERTV+YRE+AAGMYSA+ YAFAQV +E
Sbjct: 1197 TRQDLSNAMGSMYTAVLFLGLQNAASVQPVVNVERTVFYREQAAGMYSAMPYAFAQVFIE 1256

Query: 175  IPYILCQSLLYCLIVYAMIGFDWTFVKFGWXXXXXXXXXXXXXXFGMMTVAVTPNADI 2
            IPY+L Q+++Y LIVYAMIGF+WT VKF W              +GMM VA+TPN  I
Sbjct: 1257 IPYVLVQAIVYGLIVYAMIGFEWTAVKFFWYLFFMYGSFLTFTFYGMMAVAMTPNHHI 1314


>gb|AEB65936.1| ABCG subfamily transporter [Solanum tuberosum]
          Length = 1387

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/115 (63%), Positives = 86/115 (74%)
 Frame = -3

Query: 346  DLFNAMGSMDTACLFLGVQNAASAQPVVDVERTVYYRERAAGMYSAVAYAFAQVLVEIPY 167
            DL NAMGSM  A LFLGVQNA+S QPVV VERTV+YRE+AAGMYSA+ YAFAQV +EIPY
Sbjct: 1166 DLTNAMGSMYAAVLFLGVQNASSVQPVVSVERTVFYREKAAGMYSAIPYAFAQVFIEIPY 1225

Query: 166  ILCQSLLYCLIVYAMIGFDWTFVKFGWXXXXXXXXXXXXXXFGMMTVAVTPNADI 2
            +  QS++Y LIVY+MIGF+WT  KF W              FGMMTVA+TPN ++
Sbjct: 1226 VFVQSVVYGLIVYSMIGFEWTVAKFFWYFFFMFFTFLYFTFFGMMTVAITPNQNV 1280


>ref|XP_002298123.1| pleiotropic drug resistance,  ABC transporter family protein [Populus
            trichocarpa] gi|222845381|gb|EEE82928.1| pleiotropic drug
            resistance, ABC transporter family protein [Populus
            trichocarpa]
          Length = 1424

 Score =  147 bits (371), Expect = 9e-34
 Identities = 76/119 (63%), Positives = 87/119 (73%)
 Frame = -3

Query: 358  SSRIDLFNAMGSMDTACLFLGVQNAASAQPVVDVERTVYYRERAAGMYSAVAYAFAQVLV 179
            + R DLFNAMGSM TA LFLGVQNAAS QPVV VERTV+YRERAAGMYSA+ YAFAQVL+
Sbjct: 1198 TKRQDLFNAMGSMYTAVLFLGVQNAASVQPVVAVERTVFYRERAAGMYSALPYAFAQVLI 1257

Query: 178  EIPYILCQSLLYCLIVYAMIGFDWTFVKFGWXXXXXXXXXXXXXXFGMMTVAVTPNADI 2
            E+PYI  Q+ +Y +IVY+MIGF WT  KF W              +GMM VAV+PN  I
Sbjct: 1258 ELPYIFVQAAVYGVIVYSMIGFGWTISKFFWYLYFMYFTLLYFTFYGMMAVAVSPNHQI 1316


Top