BLASTX nr result
ID: Cnidium21_contig00014864
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00014864
(1745 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-... 775 0.0
ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative... 773 0.0
emb|CBI28088.3| unnamed protein product [Vitis vinifera] 770 0.0
ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-... 751 0.0
ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|2... 751 0.0
>ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
Length = 1122
Score = 775 bits (2001), Expect = 0.0
Identities = 386/576 (67%), Positives = 460/576 (79%), Gaps = 1/576 (0%)
Frame = +1
Query: 19 LHPSKLKDANGRRPNNPSYDKRTLYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKF 198
L PS+ +DAN RRP + YDKRTLYIPPDAL+ MSASQKQYW++K QYMDV++FFKVGKF
Sbjct: 242 LDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKF 301
Query: 199 YELYELDAEIGHKELDWKITLSGVGKCRQVGISENGIDDAVQKLIARGYKVGMIEQVETS 378
YELYELDAEIGHKELDWK+T SGVGKCRQVGISE+GID+AVQKLIARGYKVG +EQ+ETS
Sbjct: 302 YELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLETS 361
Query: 379 EQAKARGAASIIQRKLVQVVTPSTNIDGNIGPDAVHLLSIKEDNCGLDNGSTAYGFAFVD 558
EQAKARG+ S+IQRKLV VVTPST DGNIGPDAVHLLS+KE N L+NGS YGFAFVD
Sbjct: 362 EQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHLLSVKEGNNILENGSVIYGFAFVD 421
Query: 559 CAALKFWVGSFNDDSSCAALGTLLMQVSPKEILYESQGLSREAQKALKKYSSTGSAICQI 738
CAALKFW+GS +DD+SCAALG LLMQVSPKE++YE+Q LS+EAQKALKKYS +G ++
Sbjct: 422 CAALKFWIGSISDDASCAALGALLMQVSPKEVIYENQELSKEAQKALKKYSLSGFTALKL 481
Query: 739 TPVQTSTTFADQSEVRNLIQSKGYFKGLCNNLDYAFDGVMHCDLSFRALGGLITHLSRLM 918
TP+ T F D S+VRNLI KGYFKG N+ D+A DGVMH DL+ ALGGL+ HLSRL
Sbjct: 482 TPLPLCTDFVDASKVRNLIHLKGYFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLK 541
Query: 919 LDDAIRNGDIIPYQLYRGCLRMDGQTLINLEIFSNTADRSSSGTLYNYLDKCITPSGKRL 1098
LDD +RNGDI+PYQ+Y GCLRMDGQTL+NLEIFSN AD SSGTLY YLD C+T SGKRL
Sbjct: 542 LDDTLRNGDILPYQVYSGCLRMDGQTLVNLEIFSNNADGGSSGTLYKYLDNCVTSSGKRL 601
Query: 1099 LRHWICHPLNDIQEISRRLNVVEEMMAQSDASSLV-QHLRKLPDLERLLGRNKSTVKSSV 1275
LR+WICHPL D+Q I+ RLNVVE +M ++ S + Q LRKLPDLERLLG+ K++V+SS
Sbjct: 602 LRNWICHPLKDVQGINNRLNVVEHLMTNTETMSFIAQCLRKLPDLERLLGQVKASVQSSA 661
Query: 1276 LFMLPLIRSKILKRRVKEFGSXXXXXXXXXXXXXXXHTGQHAISSFNKFVKLPELGGENG 1455
L +LP K+LK+RVK FG H + S ++ +KLP L G +G
Sbjct: 662 LLLLPFFGKKLLKQRVKVFGLLVKGLRVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGSSG 721
Query: 1456 IDKFLSQIEAAIDSDFPDYQDHNSNDSNPEILSILMELFSEKCTEWSEVIHAISCIDVLR 1635
+DK L+Q EAAIDSDFP+Y++H+ DS+ EILSIL+ELF EK T+W +VIHAI+ IDVLR
Sbjct: 722 VDKLLTQFEAAIDSDFPNYENHDVTDSDAEILSILIELFIEKTTQWLQVIHAINHIDVLR 781
Query: 1636 SFAIISKFSPGVMCRPIILPLSKPMSVSDECRGPTL 1743
SFA+I+ FS G M RP+ILP S+P ++S E RGP L
Sbjct: 782 SFAVIANFSCGAMSRPVILPHSEPATLSGETRGPLL 817
>ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
gi|223546788|gb|EEF48286.1| DNA mismatch repair protein
MSH6-2, putative [Ricinus communis]
Length = 1089
Score = 773 bits (1996), Expect = 0.0
Identities = 381/576 (66%), Positives = 457/576 (79%), Gaps = 1/576 (0%)
Frame = +1
Query: 19 LHPSKLKDANGRRPNNPSYDKRTLYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKF 198
L P +++D NGRRP++P YDK+TLYIPPDALR MSASQKQYW++KSQYMDV++FFKVGKF
Sbjct: 220 LDPLRIRDINGRRPSDPLYDKKTLYIPPDALRIMSASQKQYWSVKSQYMDVVLFFKVGKF 279
Query: 199 YELYELDAEIGHKELDWKITLSGVGKCRQVGISENGIDDAVQKLIARGYKVGMIEQVETS 378
YELYELDAEIGHKELDWKITLSGVGKCRQVGISE+GIDDAV+KL+ARGYKVG IEQ+ETS
Sbjct: 280 YELYELDAEIGHKELDWKITLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRIEQLETS 339
Query: 379 EQAKARGAASIIQRKLVQVVTPSTNIDGNIGPDAVHLLSIKEDNCGLDNGSTAYGFAFVD 558
QAKARGA S+IQRKLVQV+TPST DGNIGPDAVHLL++KE N GLDNG TAYGFAFVD
Sbjct: 340 VQAKARGANSVIQRKLVQVITPSTATDGNIGPDAVHLLALKEGNYGLDNGETAYGFAFVD 399
Query: 559 CAALKFWVGSFNDDSSCAALGTLLMQVSPKEILYESQGLSREAQKALKKYSSTGSAICQI 738
CA+L+FWVGS NDD+SCAALG LLMQVSPKE++YE++G+SREAQKAL+KYS TGS Q+
Sbjct: 400 CASLRFWVGSINDDTSCAALGALLMQVSPKEVIYETKGISREAQKALRKYSITGSTAVQL 459
Query: 739 TPVQTSTTFADQSEVRNLIQSKGYFKGLCNNLDYAFDGVMHCDLSFRALGGLITHLSRLM 918
P ST F D SEVRN IQSKGYF+G + + FD +MH D++ ALG L+ HLSRLM
Sbjct: 460 NPAPPSTNFLDASEVRNSIQSKGYFRGSSSPWNNVFDSIMHHDITLNALGTLVDHLSRLM 519
Query: 919 LDDAIRNGDIIPYQLYRGCLRMDGQTLINLEIFSNTADRSSSGTLYNYLDKCITPSGKRL 1098
LDD +RNGDI+PYQ+Y GCLRMDGQTLINLEIF+N +D SGTL+NYLD C+T SGKRL
Sbjct: 520 LDDVLRNGDILPYQVYSGCLRMDGQTLINLEIFNNNSDGGLSGTLFNYLDNCVTSSGKRL 579
Query: 1099 LRHWICHPLNDIQEISRRLNVVEEMMAQSDASSLV-QHLRKLPDLERLLGRNKSTVKSSV 1275
LR W+CHPL ++ I+ RLNVVE++M QSD ++ Q+LRK+PD+ER+LGR K++ ++S
Sbjct: 580 LRKWMCHPLKSVEGINNRLNVVEDLMTQSDIMLVISQYLRKIPDIERMLGRVKASFQASA 639
Query: 1276 LFMLPLIRSKILKRRVKEFGSXXXXXXXXXXXXXXXHTGQHAISSFNKFVKLPELGGENG 1455
+LPLI K+L++RVK FGS IS F+K KLPEL G G
Sbjct: 640 SLVLPLIGKKVLRQRVKVFGSLVKGLRIGIDLLLLLQKEDRIISLFSKNFKLPELNGSAG 699
Query: 1456 IDKFLSQIEAAIDSDFPDYQDHNSNDSNPEILSILMELFSEKCTEWSEVIHAISCIDVLR 1635
+DKFLSQ EAA+DS+FP+YQ+H+ DS E L +L+ELF EK + WSEVI AI+CIDVLR
Sbjct: 700 LDKFLSQFEAAVDSEFPNYQNHDVTDSEAETLFVLIELFIEKASCWSEVIQAINCIDVLR 759
Query: 1636 SFAIISKFSPGVMCRPIILPLSKPMSVSDECRGPTL 1743
SFAI + S G M RP+ILP SK + GP L
Sbjct: 760 SFAITASMSSGSMSRPVILPESKSSMFGQDKGGPVL 795
>emb|CBI28088.3| unnamed protein product [Vitis vinifera]
Length = 1126
Score = 770 bits (1988), Expect = 0.0
Identities = 386/578 (66%), Positives = 460/578 (79%), Gaps = 3/578 (0%)
Frame = +1
Query: 19 LHPSKLKDANGRRPNNPSYDKRTLYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKF 198
L PS+ +DAN RRP + YDKRTLYIPPDAL+ MSASQKQYW++K QYMDV++FFKVGKF
Sbjct: 244 LDPSRKRDANRRRPGDALYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKF 303
Query: 199 YELYELDAEIGHKELDWKITLSGVGKCRQVGISENGIDDAVQKLIARGYKVGMIEQVETS 378
YELYELDAEIGHKELDWK+T SGVGKCRQVGISE+GID+AVQKLIARGYKVG +EQ+ETS
Sbjct: 304 YELYELDAEIGHKELDWKMTFSGVGKCRQVGISESGIDEAVQKLIARGYKVGRMEQLETS 363
Query: 379 EQAKARGAASIIQRKLVQVVTPSTNIDGNIGPDAVHLLSIKEDNCGLDNGSTAYGFAFVD 558
EQAKARG+ S+IQRKLV VVTPST DGNIGPDAVHLLS+KE N L+NGS YGFAFVD
Sbjct: 364 EQAKARGSTSVIQRKLVHVVTPSTACDGNIGPDAVHLLSVKEGNNILENGSVIYGFAFVD 423
Query: 559 CAALKFWVGSFNDDSSCAALGTLLMQVSPKEILYESQGLSREAQKALKKYSSTGSAICQI 738
CAALKFW+GS +DD+SCAALG LLMQVSPKE++YE+Q LS+EAQKALKKYS +G ++
Sbjct: 424 CAALKFWIGSISDDASCAALGALLMQVSPKEVIYENQELSKEAQKALKKYSLSGFTALKL 483
Query: 739 TPVQTSTTFADQSEVRNLIQSKGYFKGLCNNLDYAFDGVMHCDLSFRALGGLITHLSRLM 918
TP+ T F D S+VRNLI KGYFKG N+ D+A DGVMH DL+ ALGGL+ HLSRL
Sbjct: 484 TPLPLCTDFVDASKVRNLIHLKGYFKGSDNSWDHALDGVMHHDLALCALGGLLGHLSRLK 543
Query: 919 LDDAIRNGDIIPYQLYRGCLRMDGQTLINLEIFSNTADRSSSG--TLYNYLDKCITPSGK 1092
LDD +RNGDI+PYQ+Y GCLRMDGQTL+NLEIFSN AD SSG TLY YLD C+T SGK
Sbjct: 544 LDDTLRNGDILPYQVYSGCLRMDGQTLVNLEIFSNNADGGSSGKCTLYKYLDNCVTSSGK 603
Query: 1093 RLLRHWICHPLNDIQEISRRLNVVEEMMAQSDASSLV-QHLRKLPDLERLLGRNKSTVKS 1269
RLLR+WICHPL D+Q I+ RLNVVE +M ++ S + Q LRKLPDLERLLG+ K++V+S
Sbjct: 604 RLLRNWICHPLKDVQGINNRLNVVEHLMTNTETMSFIAQCLRKLPDLERLLGQVKASVQS 663
Query: 1270 SVLFMLPLIRSKILKRRVKEFGSXXXXXXXXXXXXXXXHTGQHAISSFNKFVKLPELGGE 1449
S L +LP K+LK+RVK FG H + S ++ +KLP L G
Sbjct: 664 SALLLLPFFGKKLLKQRVKVFGLLVKGLRVAIDLLVQLQKEGHIMPSLSEVLKLPMLSGS 723
Query: 1450 NGIDKFLSQIEAAIDSDFPDYQDHNSNDSNPEILSILMELFSEKCTEWSEVIHAISCIDV 1629
+G+DK L+Q EAAIDSDFP+Y++H+ DS+ EILSIL+ELF EK T+W +VIHAI+ IDV
Sbjct: 724 SGVDKLLTQFEAAIDSDFPNYENHDVTDSDAEILSILIELFIEKTTQWLQVIHAINHIDV 783
Query: 1630 LRSFAIISKFSPGVMCRPIILPLSKPMSVSDECRGPTL 1743
LRSFA+I+ FS G M RP+ILP S+P ++S E RGP L
Sbjct: 784 LRSFAVIANFSCGAMSRPVILPHSEPATLSGETRGPLL 821
>ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
Length = 1095
Score = 751 bits (1940), Expect = 0.0
Identities = 374/577 (64%), Positives = 453/577 (78%), Gaps = 2/577 (0%)
Frame = +1
Query: 19 LHPSKLKDANGRRPNNPSYDKRTLYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKF 198
L+PS+++DAN RRP++P YDK+TLYIPPD L+ MSASQKQYW +K QYMD+L+FFKVGKF
Sbjct: 235 LNPSQVRDANRRRPDHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFKVGKF 294
Query: 199 YELYELDAEIGHKELDWKITLSGVGKCRQVGISENGIDDAVQKLIARGYKVGMIEQVETS 378
YELYE DAEIGHKELDWK+TLSGVGKCRQVG+ E+GID+AVQKL+ARGYKVG +EQ+E++
Sbjct: 295 YELYEQDAEIGHKELDWKMTLSGVGKCRQVGVPESGIDEAVQKLVARGYKVGRVEQLESA 354
Query: 379 EQAKARGAASIIQRKLVQVVTPSTNIDGNIGPDAVHLLSIKEDNCGLDNGSTAYGFAFVD 558
EQ K+RGA S+I RKLVQV TPST DG+IGPDAVHLL+IKE++CGLDN S +YGFAFVD
Sbjct: 355 EQTKSRGANSVIPRKLVQVTTPSTKADGDIGPDAVHLLAIKEESCGLDNNSISYGFAFVD 414
Query: 559 CAALKFWVGSFNDDSSCAALGTLLMQVSPKEILYESQGLSREAQKALKKYSSTGSAICQI 738
CAALKFW GS DD+SCAALG LLMQVSPKEI+YE++GLS+E K LKKYS TGS ++
Sbjct: 415 CAALKFWTGSIKDDASCAALGALLMQVSPKEIIYEARGLSKETHKVLKKYSPTGSTALEL 474
Query: 739 TPVQTSTTFADQSEVRNLIQSKGYFKGLCNNLDYAFDGVMHCDLSFRALGGLITHLSRLM 918
T T F + SEV+ L+QSK YFKG N ++ + +H D++ ALGGLI H+SRLM
Sbjct: 475 TSGSPVTNFLEASEVKLLVQSKAYFKGSLNLWNH--ESTVHDDIALCALGGLINHMSRLM 532
Query: 919 LDDAIRNGDIIPYQLYRGCLRMDGQTLINLEIFSNTADRSSSGTLYNYLDKCITPSGKRL 1098
LDD +RNGD++PYQ+YRGCLRMDGQT++NLEIF N D SGTLY YLD C+T SGKRL
Sbjct: 533 LDDVLRNGDLLPYQVYRGCLRMDGQTMVNLEIFRNNDDGGLSGTLYKYLDNCVTSSGKRL 592
Query: 1099 LRHWICHPLNDIQEISRRLNVVEEMMAQSDASSLV--QHLRKLPDLERLLGRNKSTVKSS 1272
LR WICHPL D++EI+ RLNVVEE+MAQSD L+ +LRKLPDLERLLG+ K+TV+SS
Sbjct: 593 LRLWICHPLKDVEEINNRLNVVEELMAQSDIMVLLGTTYLRKLPDLERLLGQIKATVQSS 652
Query: 1273 VLFMLPLIRSKILKRRVKEFGSXXXXXXXXXXXXXXXHTGQHAISSFNKFVKLPELGGEN 1452
+LPLIR K+ KRRVK FGS + I S K VKLP+L G
Sbjct: 653 ASLVLPLIRKKLQKRRVKLFGSLVKGLRTGLDLLIQVQK-EGLIISLPKVVKLPQLSGNG 711
Query: 1453 GIDKFLSQIEAAIDSDFPDYQDHNSNDSNPEILSILMELFSEKCTEWSEVIHAISCIDVL 1632
G+D+FL+Q EAA+DS+FPDYQ+H+ DS E LSIL+ELF EK TEWSEVIHA++C+DVL
Sbjct: 712 GLDQFLTQFEAAVDSEFPDYQNHDVTDSGAERLSILIELFVEKATEWSEVIHALNCVDVL 771
Query: 1633 RSFAIISKFSPGVMCRPIILPLSKPMSVSDECRGPTL 1743
RSFAII+ S G M RP+ILP S +S E +GP L
Sbjct: 772 RSFAIIAHSSRGSMSRPLILPQSNNSMLSPEKQGPVL 808
>ref|XP_002331157.1| predicted protein [Populus trichocarpa] gi|222873240|gb|EEF10371.1|
predicted protein [Populus trichocarpa]
Length = 1107
Score = 751 bits (1939), Expect = 0.0
Identities = 374/578 (64%), Positives = 458/578 (79%), Gaps = 3/578 (0%)
Frame = +1
Query: 19 LHPSKLKDANGRRPNNPSYDKRTLYIPPDALRNMSASQKQYWTLKSQYMDVLMFFKVGKF 198
L P++++DAN RRPN+P YDK+TLY+PPDAL+ MSASQKQYWT+KSQYMDVL+FFKVGKF
Sbjct: 232 LDPAQIRDANRRRPNDPLYDKKTLYLPPDALKKMSASQKQYWTVKSQYMDVLLFFKVGKF 291
Query: 199 YELYELDAEIGHKELDWKITLSGVGKCRQVGISENGIDDAVQKLIARGYKVGMIEQVETS 378
YELYELDAEIGHKELDWK+TLSGVGKCRQVGISE+GIDDAV+KL+ARGYKVG +EQ+ETS
Sbjct: 292 YELYELDAEIGHKELDWKMTLSGVGKCRQVGISESGIDDAVEKLVARGYKVGRVEQLETS 351
Query: 379 EQAKARGAASIIQRKLVQVVTPSTNIDGNIGPDAVHLLSIKEDNCGLDNGSTAYGFAFVD 558
+QAK+RGA S+IQRKLVQVVTPST N+GPDAVHLL+IKE N G+DNG+TAYGFAFVD
Sbjct: 352 DQAKSRGANSVIQRKLVQVVTPSTTTGHNMGPDAVHLLAIKEGNYGVDNGATAYGFAFVD 411
Query: 559 CAALKFWVGSFNDDSSCAALGTLLMQVSPKEILYESQGLSREAQKALKKYSSTGSAICQI 738
CAAL+ WVGS NDD+S AALG LLMQ+SPKE++YE++ LSR AQK L+KYS GS Q+
Sbjct: 412 CAALRVWVGSINDDASHAALGALLMQISPKEVIYENRELSRGAQKELRKYSLIGSTALQL 471
Query: 739 TPVQTSTTFADQSEVRNLIQSKGYFKGLCNNLDYAFDGVMHCDLSFRALGGLITHLSRLM 918
+PV T F D SEV+NLIQSK YFK N ++A D +MH D+S ALGGLI HLSRLM
Sbjct: 472 SPVLPGTDFVDASEVKNLIQSKDYFKWSTNPWNHALDSIMHQDISLCALGGLIGHLSRLM 531
Query: 919 LDDAIRNGDIIPYQLYRGCLRMDGQTLINLEIFSNTADRSSSG--TLYNYLDKCITPSGK 1092
DD +RN DI+PYQ+Y+GCLRMDGQTL+NLE+FSN+AD SSG TL+NYLD C+T SGK
Sbjct: 532 FDDVLRNADILPYQVYKGCLRMDGQTLVNLEVFSNSADGGSSGQCTLFNYLDNCVTSSGK 591
Query: 1093 RLLRHWICHPLNDIQEISRRLNVVEEMMAQSDASSLV-QHLRKLPDLERLLGRNKSTVKS 1269
RLLR+WICHPL ++ I+ RL+V+E +MA+S+ ++ Q+LRKLPDLER+LGR K + ++
Sbjct: 592 RLLRNWICHPLKHVEGINNRLDVIENLMARSEIMLVIAQYLRKLPDLERMLGRVKVSFQA 651
Query: 1270 SVLFMLPLIRSKILKRRVKEFGSXXXXXXXXXXXXXXXHTGQHAISSFNKFVKLPELGGE 1449
S LPLI K+LK+RVK FGS + ISS +K KLPEL G
Sbjct: 652 SGSLALPLISKKMLKQRVKVFGSLVKGLRNGMDLLLLLLKEEQLISSLSKNFKLPELLGS 711
Query: 1450 NGIDKFLSQIEAAIDSDFPDYQDHNSNDSNPEILSILMELFSEKCTEWSEVIHAISCIDV 1629
NG++KFL Q EAA+DS+FP+YQ+ + DS +LS+L+ELF EK +W EVIHAI+CIDV
Sbjct: 712 NGLEKFLVQFEAAVDSEFPNYQNRDVTDSEAGMLSVLIELFIEKAAQWGEVIHAINCIDV 771
Query: 1630 LRSFAIISKFSPGVMCRPIILPLSKPMSVSDECRGPTL 1743
LRSFA+ + S G MCRP+ILP SK +S + GP L
Sbjct: 772 LRSFAVTASMSCGAMCRPVILPDSKSISFCEGEGGPVL 809