BLASTX nr result

ID: Cnidium21_contig00014858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014858
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306967.1| predicted protein [Populus trichocarpa] gi|1...   103   5e-20
ref|XP_002285918.1| PREDICTED: uncharacterized protein LOC100248...   100   3e-19
ref|XP_004144225.1| PREDICTED: uncharacterized protein LOC101213...    99   7e-19
gb|ABO71663.1| unknown [Brassica juncea]                               99   1e-18
ref|NP_173470.1| uncharacterized protein [Arabidopsis thaliana] ...    97   3e-18

>ref|XP_002306967.1| predicted protein [Populus trichocarpa] gi|118485981|gb|ABK94835.1|
           unknown [Populus trichocarpa]
           gi|222856416|gb|EEE93963.1| predicted protein [Populus
           trichocarpa]
          Length = 106

 Score =  103 bits (256), Expect = 5e-20
 Identities = 57/106 (53%), Positives = 61/106 (57%)
 Frame = +3

Query: 234 MITRSNLAEQLREYQLRSKHDWAXXXXXXXXXXXXXXRXXXXXXXXXXXXXXAFLVFSAV 413
           MITRSNLA+QLREYQ+RSKHDWA              R              AFLVFSAV
Sbjct: 1   MITRSNLADQLREYQIRSKHDWASVSFFSSASNISSSRVDVVVFVIWELFIIAFLVFSAV 60

Query: 414 SLYFRHLRLAFFLVCITFLLLLCMKVTXXXXXXXXXXXXXXXPLSM 551
           SLYFRH+RLAF LVCIT LLL+CMKVT               PLSM
Sbjct: 61  SLYFRHMRLAFILVCITLLLLICMKVTKQVRLARKKKRRMLLPLSM 106


>ref|XP_002285918.1| PREDICTED: uncharacterized protein LOC100248789 [Vitis vinifera]
           gi|302141681|emb|CBI18884.3| unnamed protein product
           [Vitis vinifera]
          Length = 106

 Score =  100 bits (249), Expect = 3e-19
 Identities = 56/106 (52%), Positives = 60/106 (56%)
 Frame = +3

Query: 234 MITRSNLAEQLREYQLRSKHDWAXXXXXXXXXXXXXXRXXXXXXXXXXXXXXAFLVFSAV 413
           MITRSNLAEQLREYQ+RSKHDWA              R              AFLVFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNLTSSRVDVVVFVIWELVILAFLVFSAV 60

Query: 414 SLYFRHLRLAFFLVCITFLLLLCMKVTXXXXXXXXXXXXXXXPLSM 551
           SLYFRH+RLAF LV +T LLLLCMK+T               PLSM
Sbjct: 61  SLYFRHIRLAFILVIVTMLLLLCMKITKQVRLDRKKKRRMLLPLSM 106


>ref|XP_004144225.1| PREDICTED: uncharacterized protein LOC101213289 [Cucumis sativus]
           gi|449533749|ref|XP_004173834.1| PREDICTED:
           uncharacterized protein LOC101223985 isoform 1 [Cucumis
           sativus]
          Length = 150

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 55/106 (51%), Positives = 60/106 (56%)
 Frame = +3

Query: 234 MITRSNLAEQLREYQLRSKHDWAXXXXXXXXXXXXXXRXXXXXXXXXXXXXXAFLVFSAV 413
           MITRSNL EQLREYQ+RSKH+WA              R              +FLVFSAV
Sbjct: 45  MITRSNLVEQLREYQIRSKHEWASVSFFSSTSNITSSRVDVVIFVIWELIILSFLVFSAV 104

Query: 414 SLYFRHLRLAFFLVCITFLLLLCMKVTXXXXXXXXXXXXXXXPLSM 551
           SLYFRH++LAF LVCIT LLLLCMKVT               PLSM
Sbjct: 105 SLYFRHMQLAFILVCITMLLLLCMKVTKQVRLARKKKRRMLLPLSM 150


>gb|ABO71663.1| unknown [Brassica juncea]
          Length = 106

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 55/106 (51%), Positives = 59/106 (55%)
 Frame = +3

Query: 234 MITRSNLAEQLREYQLRSKHDWAXXXXXXXXXXXXXXRXXXXXXXXXXXXXXAFLVFSAV 413
           MITRSNLAEQLREYQ+RSKHDWA              R              AFLVFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFLVFSAV 60

Query: 414 SLYFRHLRLAFFLVCITFLLLLCMKVTXXXXXXXXXXXXXXXPLSM 551
           SLYF+ L LAF LVC+T LLLLCMK+T               PLSM
Sbjct: 61  SLYFKRLELAFILVCVTLLLLLCMKITKQVRVARKKKRRMLLPLSM 106


>ref|NP_173470.1| uncharacterized protein [Arabidopsis thaliana]
           gi|22655238|gb|AAM98209.1| unknown protein [Arabidopsis
           thaliana] gi|25084019|gb|AAN72156.1| unknown protein
           [Arabidopsis thaliana] gi|332191854|gb|AEE29975.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 106

 Score = 97.4 bits (241), Expect = 3e-18
 Identities = 54/106 (50%), Positives = 59/106 (55%)
 Frame = +3

Query: 234 MITRSNLAEQLREYQLRSKHDWAXXXXXXXXXXXXXXRXXXXXXXXXXXXXXAFLVFSAV 413
           MITRSNLAEQLREYQ+RSKHDWA              R              AF VFSAV
Sbjct: 1   MITRSNLAEQLREYQIRSKHDWASVSFFSSTSNFSSSRVDVVVFVIWELVILAFFVFSAV 60

Query: 414 SLYFRHLRLAFFLVCITFLLLLCMKVTXXXXXXXXXXXXXXXPLSM 551
           SLYF+ L+LAF LVC+T LLL+CMKVT               PLSM
Sbjct: 61  SLYFKRLQLAFILVCVTLLLLICMKVTKQVRLARKKKRRMLLPLSM 106


Top