BLASTX nr result

ID: Cnidium21_contig00014785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014785
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35308.3| unnamed protein product [Vitis vinifera]               96   2e-17
ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ...    95   3e-17
ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ...    95   3e-17
emb|CBI35306.3| unnamed protein product [Vitis vinifera]               95   3e-17
ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putativ...    92   3e-16

>emb|CBI35308.3| unnamed protein product [Vitis vinifera]
          Length = 775

 Score = 95.5 bits (236), Expect = 2e-17
 Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
 Frame = +3

Query: 759  NSLDSDDQKFSNS---PSHGWARRIFSSLYQYIPGVLNPHAKILQKWNKILIXXXXXXXX 929
            +S    + KF N+    + GWARR FSSL  Y+PG++NPH K++Q+WN+  +        
Sbjct: 159  DSRQQRNSKFHNAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLLAIF 218

Query: 930  XXXXXXXXXXAKQGNNCIAVNQTMTKVLIFLRSVTNFIYLLRILIKFRLAY 1082
                       +Q N CI ++ ++TK ++  RS+T+FIYLL +L++FRLAY
Sbjct: 219  VDPLFFLLLSVQQENKCIIIDLSLTKTIVAFRSMTDFIYLLNMLLQFRLAY 269


>ref|XP_003634326.1| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Vitis vinifera]
          Length = 783

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 42/103 (40%), Positives = 64/103 (62%), Gaps = 3/103 (2%)
 Frame = +3

Query: 783  KFSNS---PSHGWARRIFSSLYQYIPGVLNPHAKILQKWNKILIXXXXXXXXXXXXXXXX 953
            KF N+    + GWARR FSSL  Y+PG++NPH K++Q+WN+  +                
Sbjct: 175  KFHNAFYGDARGWARRFFSSLQSYVPGIMNPHTKVVQQWNRFFVISCLLAIFVDPLFFLL 234

Query: 954  XXAKQGNNCIAVNQTMTKVLIFLRSVTNFIYLLRILIKFRLAY 1082
               +Q N CI ++ ++TK ++  RS+T+FIYLL +L++FRLAY
Sbjct: 235  LSVQQENKCIIIDLSLTKTIVAFRSMTDFIYLLNMLLQFRLAY 277


>ref|XP_002270141.2| PREDICTED: probable cyclic nucleotide-gated ion channel 20,
            chloroplastic-like [Vitis vinifera]
          Length = 779

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 39/94 (41%), Positives = 59/94 (62%)
 Frame = +3

Query: 801  SHGWARRIFSSLYQYIPGVLNPHAKILQKWNKILIXXXXXXXXXXXXXXXXXXAKQGNNC 980
            + GWARR FSSL  Y+PG++NPH K++Q+WN+  +                   +Q N C
Sbjct: 178  ARGWARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISCLLAIFVDPLFFLLLSVQQENKC 237

Query: 981  IAVNQTMTKVLIFLRSVTNFIYLLRILIKFRLAY 1082
            I ++  +TK ++  RS+T+FIYLL +L++FRLAY
Sbjct: 238  IIIDMPLTKTIVVFRSMTDFIYLLNMLLQFRLAY 271


>emb|CBI35306.3| unnamed protein product [Vitis vinifera]
          Length = 777

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 39/94 (41%), Positives = 59/94 (62%)
 Frame = +3

Query: 801  SHGWARRIFSSLYQYIPGVLNPHAKILQKWNKILIXXXXXXXXXXXXXXXXXXAKQGNNC 980
            + GWARR FSSL  Y+PG++NPH K++Q+WN+  +                   +Q N C
Sbjct: 176  ARGWARRFFSSLQSYVPGIMNPHTKVVQRWNRFFVISCLLAIFVDPLFFLLLSVQQENKC 235

Query: 981  IAVNQTMTKVLIFLRSVTNFIYLLRILIKFRLAY 1082
            I ++  +TK ++  RS+T+FIYLL +L++FRLAY
Sbjct: 236  IIIDMPLTKTIVVFRSMTDFIYLLNMLLQFRLAY 269


>ref|XP_002524633.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
            gi|223536102|gb|EEF37758.1| Cyclic nucleotide-gated ion
            channel, putative [Ricinus communis]
          Length = 778

 Score = 91.7 bits (226), Expect = 3e-16
 Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
 Frame = +3

Query: 777  DQKFSNS---PSHGWARRIFSSLYQYIPGVLNPHAKILQKWNKILIXXXXXXXXXXXXXX 947
            D KF N+    + GWA R  S L +YIPGV+NPH K++Q+WNK  +              
Sbjct: 168  DSKFHNALYGDAKGWATRFTSFLKRYIPGVMNPHTKVVQQWNKFCVICCLVAIFVDPLFF 227

Query: 948  XXXXAKQGNNCIAVNQTMTKVLIFLRSVTNFIYLLRILIKFRLAY 1082
                 +Q N CI +N  +T  +I  RS+T+FIYLL IL++FRLAY
Sbjct: 228  FMLSVQQENKCIVINWPLTTTIIVFRSMTDFIYLLNILLQFRLAY 272


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