BLASTX nr result

ID: Cnidium21_contig00014736 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014736
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268633.2| PREDICTED: protein transport protein SEC23-l...    70   3e-18
ref|XP_004147649.1| PREDICTED: protein transport protein SEC23-l...    69   2e-17
ref|NP_001189956.1| protein transport protein SEC23 [Arabidopsis...    67   1e-16
ref|NP_849541.2| sec23/sec24-like transport protein [Arabidopsis...    69   2e-16
ref|NP_193152.2| sec23/sec24-like transport protein [Arabidopsis...    69   2e-16

>ref|XP_002268633.2| PREDICTED: protein transport protein SEC23-like [Vitis vinifera]
          Length = 785

 Score = 70.5 bits (171), Expect(2) = 3e-18
 Identities = 36/48 (75%), Positives = 40/48 (83%), Gaps = 2/48 (4%)
 Frame = -2

Query: 320 FFFVLYTCVVEEELGFVKLALSQAIGLLPDNVLVGLVSFGT--QVHEL 183
           F FVL TC++EEELGFVK AL +AIGLLP+N LVG VSFGT  QVHEL
Sbjct: 149 FLFVLDTCMIEEELGFVKSALKRAIGLLPENALVGFVSFGTQVQVHEL 196



 Score = 46.2 bits (108), Expect(2) = 3e-18
 Identities = 29/69 (42%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
 Frame = -1

Query: 177 LGFGEMSKVYVFRGVKELGKEQVLDQ----------XXXXXXXXXXXXXXXXXXXXXLPA 28
           LGF E+SKVYVFRG KE+ K+QVL+Q                               LPA
Sbjct: 196 LGFSEISKVYVFRGSKEISKDQVLEQLGLGGAGRRAVGGYPKGVQNGYASSGVTRFLLPA 255

Query: 27  SDCEYTFTS 1
           SDCEYT  S
Sbjct: 256 SDCEYTLNS 264


>ref|XP_004147649.1| PREDICTED: protein transport protein SEC23-like [Cucumis sativus]
          Length = 776

 Score = 68.6 bits (166), Expect(2) = 2e-17
 Identities = 34/48 (70%), Positives = 39/48 (81%), Gaps = 2/48 (4%)
 Frame = -2

Query: 320 FFFVLYTCVVEEELGFVKLALSQAIGLLPDNVLVGLVSFGT--QVHEL 183
           F F+L TC++EEELGFVK  L +A+GLLPDN LVG VSFGT  QVHEL
Sbjct: 139 FLFLLDTCMIEEELGFVKSELKRAVGLLPDNALVGFVSFGTQVQVHEL 186



 Score = 45.4 bits (106), Expect(2) = 2e-17
 Identities = 28/69 (40%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
 Frame = -1

Query: 177 LGFGEMSKVYVFRGVKELGKEQVLDQ----------XXXXXXXXXXXXXXXXXXXXXLPA 28
           LGF +MSKVYVFRG KE+ K+QVL+Q                               LPA
Sbjct: 186 LGFSDMSKVYVFRGTKEVSKDQVLEQLGLAVGARRVAGAYQKGVQNGFPNSGVTRFLLPA 245

Query: 27  SDCEYTFTS 1
           S+CEYT  S
Sbjct: 246 SECEYTLNS 254


>ref|NP_001189956.1| protein transport protein SEC23 [Arabidopsis thaliana]
           gi|332643276|gb|AEE76797.1| protein transport protein
           SEC23 [Arabidopsis thaliana]
          Length = 791

 Score = 67.4 bits (163), Expect(2) = 1e-16
 Identities = 32/44 (72%), Positives = 35/44 (79%)
 Frame = -2

Query: 320 FFFVLYTCVVEEELGFVKLALSQAIGLLPDNVLVGLVSFGTQVH 189
           F FVL TC++EEEL F K AL QAIGLLP+N LVG VSFGTQ H
Sbjct: 133 FVFVLDTCMIEEELDFAKSALKQAIGLLPENALVGFVSFGTQAH 176



 Score = 43.9 bits (102), Expect(2) = 1e-16
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
 Frame = -1

Query: 177 LGFGEMSKVYVFRGVKELGKEQVLDQ-------XXXXXXXXXXXXXXXXXXXXXLPASDC 19
           LGF EMSKV+VF+G KE+ K+Q+LDQ                            LPAS+C
Sbjct: 180 LGFSEMSKVFVFKGDKEISKDQILDQLGLGGSSRRGGSKGPQNGFPSSGLNRFLLPASEC 239

Query: 18  EYTFTS 1
           E+T  S
Sbjct: 240 EFTLNS 245


>ref|NP_849541.2| sec23/sec24-like transport protein [Arabidopsis thaliana]
           gi|332657985|gb|AEE83385.1| sec23/sec24-like transport
           protein [Arabidopsis thaliana]
          Length = 773

 Score = 68.9 bits (167), Expect(2) = 2e-16
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = -2

Query: 320 FFFVLYTCVVEEELGFVKLALSQAIGLLPDNVLVGLVSFGTQVH 189
           F FVL TC++EEELG+ K AL QAIGLLP+N LVG VSFGTQ H
Sbjct: 136 FVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGFVSFGTQAH 179



 Score = 41.6 bits (96), Expect(2) = 2e-16
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = -1

Query: 177 LGFGEMSKVYVFRGVKELGKEQVLDQ 100
           LGF EMSKV+VF+G KE+ K+Q+LDQ
Sbjct: 183 LGFSEMSKVFVFKGNKEVTKDQILDQ 208


>ref|NP_193152.2| sec23/sec24-like transport protein [Arabidopsis thaliana]
           gi|18389288|gb|AAL67087.1| putative transport protein
           [Arabidopsis thaliana] gi|21689679|gb|AAM67461.1|
           putative transport protein [Arabidopsis thaliana]
           gi|332657987|gb|AEE83387.1| sec23/sec24-like transport
           protein [Arabidopsis thaliana]
          Length = 772

 Score = 68.9 bits (167), Expect(2) = 2e-16
 Identities = 32/44 (72%), Positives = 36/44 (81%)
 Frame = -2

Query: 320 FFFVLYTCVVEEELGFVKLALSQAIGLLPDNVLVGLVSFGTQVH 189
           F FVL TC++EEELG+ K AL QAIGLLP+N LVG VSFGTQ H
Sbjct: 136 FVFVLDTCMIEEELGYAKSALKQAIGLLPENALVGFVSFGTQAH 179



 Score = 41.6 bits (96), Expect(2) = 2e-16
 Identities = 18/26 (69%), Positives = 23/26 (88%)
 Frame = -1

Query: 177 LGFGEMSKVYVFRGVKELGKEQVLDQ 100
           LGF EMSKV+VF+G KE+ K+Q+LDQ
Sbjct: 183 LGFSEMSKVFVFKGNKEVTKDQILDQ 208


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