BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014723
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   307   3e-81
emb|CBI17549.3| unnamed protein product [Vitis vinifera]              307   3e-81
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       275   1e-71
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   274   2e-71
gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]          263   5e-68

>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  307 bits (786), Expect = 3e-81
 Identities = 178/349 (51%), Positives = 231/349 (66%), Gaps = 8/349 (2%)
 Frame = -1

Query: 1023 LEDRLKTWVCEVAPMHRFDVLKYLAPSDSVEDLLEVLKKLCYLVQGLWVPKSSLLEL--H 850
            LE+R KT +CE  P+HRF  LK+ AP +SVED+L VL K  +LVQGLWVPKSSLL     
Sbjct: 325  LEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQ 384

Query: 849  GLDALVRDYTLYLFSKSHCISKSDLPQKSKLKNAMENVLRVFAVQRLALRDWKFKEPKDM 670
            G+  L RDY L LFSK   I+ S +     L  A++  L + AV+R + RDWKFKEP D+
Sbjct: 385  GVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDV 444

Query: 669  SFVQLHPDIVKEQEQAWETRGEKLNTQIY-GERSAHGLKN---PSKTDRTGRLVSVENAS 502
            SF++LHPDIV+EQ + WE+  +++   I+ G R     KN   PS  ++TG        S
Sbjct: 445  SFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTG----TSTKS 500

Query: 501  KGLPKTSTKTPA-KTFISDETREALLKTLQKLFQTNKVCSFQRICQLLRDVAISKDVHAK 325
             G  + +  TP  +T +S ETREAL K L+++F+ +KVCSFQ ICQ LRD+A+SK    K
Sbjct: 501  DGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPK 560

Query: 324  -GGALERSAATGLDAPPEELRAIINQVAIDIHGVYVSRTSTDHSYDGLRKTVIDLLIVEG 148
                   +AA G DAP EEL AII++ A  +HGVYV +TS    ++ LRK V+DL   + 
Sbjct: 561  VDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKE 620

Query: 147  PNAKLKKATIIEAAKMALKREEIPMAEYNKVMSELCVSRGSVWVLKSGD 1
            PNAKLK+A I+EAAK+ALK+ EI   EYNKV+SELC SRGS+WVLKSGD
Sbjct: 621  PNAKLKRADIMEAAKIALKK-EITTHEYNKVVSELCESRGSLWVLKSGD 668


>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  307 bits (786), Expect = 3e-81
 Identities = 178/349 (51%), Positives = 231/349 (66%), Gaps = 8/349 (2%)
 Frame = -1

Query: 1023 LEDRLKTWVCEVAPMHRFDVLKYLAPSDSVEDLLEVLKKLCYLVQGLWVPKSSLLEL--H 850
            LE+R KT +CE  P+HRF  LK+ AP +SVED+L VL K  +LVQGLWVPKSSLL     
Sbjct: 341  LEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKSSLLFPGGQ 400

Query: 849  GLDALVRDYTLYLFSKSHCISKSDLPQKSKLKNAMENVLRVFAVQRLALRDWKFKEPKDM 670
            G+  L RDY L LFSK   I+ S +     L  A++  L + AV+R + RDWKFKEP D+
Sbjct: 401  GVAPLARDYILLLFSKGPLINYSQVDVPGSLNKALKGFLSILAVERPSFRDWKFKEPTDV 460

Query: 669  SFVQLHPDIVKEQEQAWETRGEKLNTQIY-GERSAHGLKN---PSKTDRTGRLVSVENAS 502
            SF++LHPDIV+EQ + WE+  +++   I+ G R     KN   PS  ++TG        S
Sbjct: 461  SFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKTG----TSTKS 516

Query: 501  KGLPKTSTKTPA-KTFISDETREALLKTLQKLFQTNKVCSFQRICQLLRDVAISKDVHAK 325
             G  + +  TP  +T +S ETREAL K L+++F+ +KVCSFQ ICQ LRD+A+SK    K
Sbjct: 517  DGATRATNGTPVRRTAMSAETREALPKALEEVFRLHKVCSFQLICQALRDLAVSKSTSPK 576

Query: 324  -GGALERSAATGLDAPPEELRAIINQVAIDIHGVYVSRTSTDHSYDGLRKTVIDLLIVEG 148
                   +AA G DAP EEL AII++ A  +HGVYV +TS    ++ LRK V+DL   + 
Sbjct: 577  VDPRTFVAAAYGADAPQEELHAIISKYATTVHGVYVWKTSEHSEHNPLRKVVVDLFCGKE 636

Query: 147  PNAKLKKATIIEAAKMALKREEIPMAEYNKVMSELCVSRGSVWVLKSGD 1
            PNAKLK+A I+EAAK+ALK+ EI   EYNKV+SELC SRGS+WVLKSGD
Sbjct: 637  PNAKLKRADIMEAAKIALKK-EITTHEYNKVVSELCESRGSLWVLKSGD 684


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  275 bits (703), Expect = 1e-71
 Identities = 157/344 (45%), Positives = 215/344 (62%), Gaps = 3/344 (0%)
 Frame = -1

Query: 1023 LEDRLKTWVCEVAPMHRFDVLKYLAPSDSVEDLLEVLKKLCYLVQGLWVPKSSLL--ELH 850
            LE+R +TW+ +  P+HRFD LK+LAP  SVED+L VL +   LVQGLW+PKSSLL  +  
Sbjct: 338  LEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIPKSSLLYGKDQ 397

Query: 849  GLDALVRDYTLYLFSKSHCISKSDLPQKSKLKNAMENVLRVFAVQRLALRDWKFKEPKDM 670
            G+DAL RDY L LFS++  I+ S LPQ+ KL  AM +VL   A +R++L DWKFKEP DM
Sbjct: 398  GIDALARDYVLLLFSRTPIINNSQLPQQQKLNRAMRDVLDTVAFERVSLNDWKFKEPPDM 457

Query: 669  SFVQLHPDIVKEQEQAWETRGEKLNTQIYGERSAHGLKNPSKTDRTGRLVSVENASKGLP 490
            +F++L+P IV+EQEQ WE   + +  +I+G+++    KN S+   T    + ++ SK   
Sbjct: 458  TFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNNPATSKSLSKHAS 517

Query: 489  KTSTKTPAKTFISDETREALLKTLQKLFQTNKVCSFQRICQLLRDVAISKDVHAKGGALE 310
             +      +  +S+ETREAL K LQKLFQ++KVC FQ+ICQ LR++A+S+    KG A E
Sbjct: 518  NSLNAGVPRRPMSEETREALPKALQKLFQSHKVC-FQQICQRLREMAVSESSRPKGFARE 576

Query: 309  R-SAATGLDAPPEELRAIINQVAIDIHGVYVSRTSTDHSYDGLRKTVIDLLIVEGPNAKL 133
              +AA G++APPEEL+AII+QVAI+IHGVYV ++S  H                      
Sbjct: 577  AIAAAHGVEAPPEELQAIISQVAINIHGVYVLKSSPVHP--------------------- 615

Query: 132  KKATIIEAAKMALKREEIPMAEYNKVMSELCVSRGSVWVLKSGD 1
                         + +E        V+ ELCVS+GS WVLKSGD
Sbjct: 616  -------------EHDEF-------VVQELCVSQGSAWVLKSGD 639


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  274 bits (701), Expect = 2e-71
 Identities = 157/329 (47%), Positives = 219/329 (66%), Gaps = 6/329 (1%)
 Frame = -1

Query: 1023 LEDRLKTWVCEVAPMHRFDVLKYLAPSDSVEDLLEVLKKLCYLVQGLWVPKSSLLELHGL 844
            L +RLK  + E  P+ RF VLK+ AP DSVED+L+VL++   LVQGLW PKSSLL     
Sbjct: 335  LAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLLFPDAN 394

Query: 843  DAL-VRDYTLYLFSKSHCISKSDLPQKSKLKNAMENVLRVFAVQRLALRDWKFKEPKDMS 667
                +RDY L LFSK+  I+ S +    K+K  +++ L +FAV+R + +DWKFKE  D +
Sbjct: 395  SKQGIRDYVLLLFSKNLVINSSQVNFPVKIKEEIKSFLNLFAVERPSFKDWKFKEHTDTT 454

Query: 666  FVQLHPDIVKEQEQAWETRGEKLNTQIYGERSAHGLKNP-SKTDRTGRLVSVENASKGLP 490
            F++L+PDIVK+QE+AW+   EK  ++++       +KN   K       V   ++ K +P
Sbjct: 455  FIKLYPDIVKKQEEAWDNT-EKRLSKVFDRSGKASMKNAIPKPPMVHNTVKHLDSEKSMP 513

Query: 489  KTST--KTPAKTFISDETREALLKTLQKLFQTNKVCSFQRICQLLRDVAISKDVHAKGG- 319
            K ++  +   KT I+ ETREALLK L K+FQ++KVCSFQ ICQ LRD+A+S+    K   
Sbjct: 514  KIASGMRRLTKTTITVETREALLKALPKVFQSHKVCSFQLICQGLRDLAVSQSTLPKADP 573

Query: 318  ALERSAATGLDAPPEELRAIINQVAIDIHGVYVSRTSTDH-SYDGLRKTVIDLLIVEGPN 142
             +  +AA+G DAPPEEL+ II+QVA +IHG YV ++S +H  YD LRK +IDLL+  GPN
Sbjct: 574  RIAVAAASGADAPPEELQEIISQVATNIHGFYVLKSSPEHPQYDELRKVIIDLLLARGPN 633

Query: 141  AKLKKATIIEAAKMALKREEIPMAEYNKV 55
            AKLKKA + EAA++A KR ++   EYNK+
Sbjct: 634  AKLKKAEVFEAARLAFKR-DVTNIEYNKL 661


>gb|ABU45193.1| unknown [Petunia integrifolia subsp. inflata]
          Length = 666

 Score =  263 bits (672), Expect = 5e-68
 Identities = 154/334 (46%), Positives = 214/334 (64%), Gaps = 11/334 (3%)
 Frame = -1

Query: 1023 LEDRLKTWVCEVAPMHRFDVLKYLAPSDSVEDLLEVLKKLCYLVQGLWVPKSSLL--ELH 850
            L++R +TW+ E  P+HRF  LK+LA  + VE++LEVL++   +VQGLWVPKSSL+     
Sbjct: 339  LDERFRTWLHEGPPIHRFGALKHLALDNPVEEILEVLQRYAQVVQGLWVPKSSLVYGRND 398

Query: 849  GLDALVRDYTLYLFSKSHCISKSDLPQKSKLKNAMENVLRVFAVQRLALRDWKFKEPKDM 670
            G + L RD+ L+ FSKS  I +S   +K +   A    L++ AV+R  L DWK KE  D 
Sbjct: 399  GHEVLARDFVLFEFSKSPFIKQSVFDRKPEFFKAATPALKLLAVERPDLNDWKLKEHPDK 458

Query: 669  SFVQLHPDIVKEQEQAWETRGEKLNTQIYGERSAHGLKNPSKTDRTGRLVSVENASKGLP 490
             F  L+ D+VKEQ+  WE  G+++   + G R+   +KNPS            N S G+P
Sbjct: 459  EFENLYGDLVKEQQVTWERLGKQIYGLLAGGRNRPTMKNPS------------NPSAGIP 506

Query: 489  ------KTSTKTPAKTFISDETREALLKTLQKLFQTNKVCSFQRICQLLRDVAISKDVHA 328
                  K + ++  +T +S+ TREAL K LQK+F+T+KVCSFQ+I   LR+ A+S++   
Sbjct: 507  ALPSGGKPTPRSVTRTSMSERTREALQKALQKVFRTHKVCSFQQIRLRLREAAVSENDRP 566

Query: 327  KGGALERSAATGL--DAPPEELRAIINQVAIDIHGVYVSRTSTDH-SYDGLRKTVIDLLI 157
            KG A    AA     DAPPEEL+A+I+QVA +IHG YV ++S D+  YD LRK V++LLI
Sbjct: 567  KGNAKGAVAAASFVDDAPPEELQAVIDQVAFNIHGDYVLKSSPDNPQYDALRKVVVELLI 626

Query: 156  VEGPNAKLKKATIIEAAKMALKREEIPMAEYNKV 55
             EGP+AKLKKATI++AAK  L R +IP AE+ KV
Sbjct: 627  GEGPSAKLKKATIMKAAKSELNR-DIPPAEFQKV 659