BLASTX nr result

ID: Cnidium21_contig00014666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014666
         (939 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531488.1| serine/arginine rich splicing factor, putati...    76   1e-11
gb|ABB29919.1| unknown [Solanum tuberosum]                             62   2e-07
tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea m...    62   3e-07
ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea ma...    62   3e-07
gb|ACR36750.1| unknown [Zea mays] gi|414590933|tpg|DAA41504.1| T...    61   4e-07

>ref|XP_002531488.1| serine/arginine rich splicing factor, putative [Ricinus communis]
           gi|223528897|gb|EEF30895.1| serine/arginine rich
           splicing factor, putative [Ricinus communis]
          Length = 257

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 61/179 (34%), Positives = 72/179 (40%), Gaps = 6/179 (3%)
 Frame = -2

Query: 830 KVVDGREIMVQFAKYGPNAERISKGRILEPVEKLGXXXXXXXXXX*LSA**LIYK----X 663
           +VVDGREI VQFAKYGPNAERI KGRI+EPV +                    YK     
Sbjct: 80  RVVDGREITVQFAKYGPNAERIHKGRIIEPVPRSRNRSRSRSPRRRYRD---DYKDRDYR 136

Query: 662 XXXXXXXXXXXXXXXXXXXXRNYHHKSRNRSLSPDYR--KXXXXXXXXXXXXXXXXXXXX 489
                               R+Y  +SR+RS SPDY   +                    
Sbjct: 137 KRSRSKSLDRHERDKYRGRERDYRRQSRSRSASPDYSRGRGRGRYDDERRSSSRSMGSAS 196

Query: 488 XXXXXXXXXXXXXXPKKTPTRDRSSDARDHKERSPVARSVSPRPRAADSRTPSPRISDL 312
                          K +P +  S D R    RSP  RS SP  RA  SR+PSPR SD+
Sbjct: 197 PARRSPSPRRSRSPLKNSPPKGASPDRRSRDGRSPTPRSASPHGRAPASRSPSPRNSDV 255


>gb|ABB29919.1| unknown [Solanum tuberosum]
          Length = 258

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 28/33 (84%), Positives = 32/33 (96%)
 Frame = -2

Query: 830 KVVDGREIMVQFAKYGPNAERISKGRILEPVEK 732
           +VVDGREIMV+FAKYGPNAERI KGRILEPV++
Sbjct: 80  RVVDGREIMVRFAKYGPNAERIDKGRILEPVQR 112


>tpg|DAA63676.1| TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
          Length = 207

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -2

Query: 830 KVVDGREIMVQFAKYGPNAERISKGRILEPVEKLG 726
           ++VDGREIMVQFAKYGPNAERI+KGRI+EPV + G
Sbjct: 81  RLVDGREIMVQFAKYGPNAERINKGRIVEPVPRPG 115


>ref|NP_001169755.1| uncharacterized protein LOC100383636 [Zea mays]
           gi|224031469|gb|ACN34810.1| unknown [Zea mays]
           gi|414887660|tpg|DAA63674.1| TPA: hypothetical protein
           ZEAMMB73_707044 [Zea mays] gi|414887661|tpg|DAA63675.1|
           TPA: hypothetical protein ZEAMMB73_707044 [Zea mays]
          Length = 246

 Score = 61.6 bits (148), Expect = 3e-07
 Identities = 28/35 (80%), Positives = 33/35 (94%)
 Frame = -2

Query: 830 KVVDGREIMVQFAKYGPNAERISKGRILEPVEKLG 726
           ++VDGREIMVQFAKYGPNAERI+KGRI+EPV + G
Sbjct: 81  RLVDGREIMVQFAKYGPNAERINKGRIVEPVPRPG 115


>gb|ACR36750.1| unknown [Zea mays] gi|414590933|tpg|DAA41504.1| TPA: hypothetical
           protein ZEAMMB73_776046 [Zea mays]
           gi|414590934|tpg|DAA41505.1| TPA: hypothetical protein
           ZEAMMB73_776046 [Zea mays]
          Length = 190

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 27/33 (81%), Positives = 32/33 (96%)
 Frame = -2

Query: 830 KVVDGREIMVQFAKYGPNAERISKGRILEPVEK 732
           ++VDGREIMVQFAKYGPNAERI+KGRI+EPV +
Sbjct: 81  RLVDGREIMVQFAKYGPNAERINKGRIMEPVPR 113


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