BLASTX nr result

ID: Cnidium21_contig00014659 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014659
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]      97   2e-18
gb|AAC32120.1| probable fibrillarin [Picea mariana]                    60   2e-07
gb|ABK26802.1| unknown [Picea sitchensis]                              60   2e-07
ref|XP_003592692.1| Fibrillarin [Medicago truncatula] gi|3583453...    59   3e-07
ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibri...    59   5e-07

>dbj|BAE71270.1| putative fibrillarin homolog [Trifolium pratense]
          Length = 475

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 51/113 (45%), Positives = 71/113 (62%), Gaps = 7/113 (6%)
 Frame = -3

Query: 452 LTIKAKRYYHYTYRMLVGMVDVIFAEIDHHPEEQFCV------EGGFVVNNARYYLRAAG 291
           +TI     Y+  YRM++GMVD +F EIDH   E + +      +G F+VNN  +YL+  G
Sbjct: 361 VTIIENDCYYCHYRMVLGMVDAVFGEIDHPLGEIYRLPTKVYRDGRFIVNNVHFYLKTGG 420

Query: 290 HYMISRQVKVMNSTRRFIFAAHDYAMEFKPIETVMLDM-EGAYALDVGGYRMR 135
           HYMI  +   MNS    IF++ D   EFK ++TV LD+ EGAY +D+GGYRM+
Sbjct: 421 HYMICTKADNMNSKGHIIFSSGDINREFKLLQTVPLDLVEGAYFIDIGGYRMQ 473


>gb|AAC32120.1| probable fibrillarin [Picea mariana]
          Length = 249

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
 Frame = -3

Query: 428 YHYTYRMLVGMVDVIFAEIDHHPEEQFCVEGGFVVNNARYYLRAAGHYMISRQVKVMNST 249
           Y   YRMLVGMVDVIFA++    + +       V  NA Y+L+  GH+++S +   ++ST
Sbjct: 142 YPVRYRMLVGMVDVIFADVAQPDQAR------IVALNAHYFLKNGGHFVLSIKANCIDST 195

Query: 248 --RRFIFAAHDYAM---EFKPIETVMLD-MEGAYALDVGGYRM 138
                +FA     +   +FKP E V L+  E  +A  VGGYRM
Sbjct: 196 VPAEAVFAQEVKKLQKEQFKPFEQVTLEPFERDHACVVGGYRM 238


>gb|ABK26802.1| unknown [Picea sitchensis]
          Length = 312

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
 Frame = -3

Query: 428 YHYTYRMLVGMVDVIFAEIDHHPEEQFCVEGGFVVNNARYYLRAAGHYMISRQVKVMNST 249
           Y   YRMLVGMVDVIFA++    + +       V  NA Y+L+  GH+++S +   ++ST
Sbjct: 205 YPVRYRMLVGMVDVIFADVAQPDQAR------IVALNAHYFLKNGGHFVLSIKANCIDST 258

Query: 248 --RRFIFAAHDYAM---EFKPIETVMLD-MEGAYALDVGGYRM 138
                +FA     +   +FKP E V L+  E  +A  VGGYRM
Sbjct: 259 VPAEAVFAQEVKKLQKEQFKPFEQVTLEPFERDHACVVGGYRM 301


>ref|XP_003592692.1| Fibrillarin [Medicago truncatula] gi|358345300|ref|XP_003636719.1|
           Fibrillarin [Medicago truncatula]
           gi|355481740|gb|AES62943.1| Fibrillarin [Medicago
           truncatula] gi|355502654|gb|AES83857.1| Fibrillarin
           [Medicago truncatula] gi|388494564|gb|AFK35348.1|
           unknown [Medicago truncatula]
          Length = 313

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 6/99 (6%)
 Frame = -3

Query: 416 YRMLVGMVDVIFAEIDHHPEEQFCVEGGFVVNNARYYLRAAGHYMISRQVKVMNST--RR 243
           YRMLVGMVDVIF+++    + +       +  NA YYL+A GH++IS +   ++ST    
Sbjct: 213 YRMLVGMVDVIFSDVAQPDQARI------LGLNASYYLKAGGHFVISIKANCIDSTVPAE 266

Query: 242 FIFAAHD---YAMEFKPIETVMLD-MEGAYALDVGGYRM 138
            +F+A      A +FKP+E V L+  E  +A  VGGYR+
Sbjct: 267 AVFSAEVNKLKADQFKPMEQVTLEPFERDHACVVGGYRV 305


>ref|XP_003634097.1| PREDICTED: rRNA 2'-O-methyltransferase fibrillarin 2-like isoform 2
           [Vitis vinifera]
          Length = 316

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 39/99 (39%), Positives = 57/99 (57%), Gaps = 6/99 (6%)
 Frame = -3

Query: 416 YRMLVGMVDVIFAEIDHHPEEQFCVEGGFVVNNARYYLRAAGHYMISRQVKVMNST--RR 243
           YRMLVGMVDVIF+++    + +       +  NA Y+L+A GH++IS +   ++ST    
Sbjct: 216 YRMLVGMVDVIFSDVAQPDQAR------ILALNASYFLKAGGHFVISIKANCIDSTVPAE 269

Query: 242 FIFAAHDYAME---FKPIETVMLD-MEGAYALDVGGYRM 138
            +FA     ++   FKP E V L+  E  +A  VGGYRM
Sbjct: 270 AVFAQEVKKLQADMFKPSEQVTLEPFERDHACVVGGYRM 308


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