BLASTX nr result

ID: Cnidium21_contig00014652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014652
         (564 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   156   3e-36
ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   156   3e-36
ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|2...   154   7e-36
ref|XP_002521886.1| conserved hypothetical protein [Ricinus comm...   150   2e-34
ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|1...   149   2e-34

>ref|XP_004140393.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 2 [Cucumis sativus]
           gi|449445266|ref|XP_004140394.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 3 [Cucumis sativus]
           gi|449445268|ref|XP_004140395.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like isoform 4 [Cucumis sativus]
           gi|449528433|ref|XP_004171209.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit
           7-like [Cucumis sativus]
          Length = 96

 Score =  156 bits (394), Expect = 3e-36
 Identities = 75/91 (82%), Positives = 81/91 (89%)
 Frame = +1

Query: 49  GSSKKMIATQQEMVDAKVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYE 228
           GSSKKMIATQ EMV+A+VPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEKCEYE
Sbjct: 5   GSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYE 64

Query: 229 LVMERMLQMQKIKQNQELKSSGGVPLIPNPA 321
           LVMERMLQMQKI++ Q  K   G+ LIP  A
Sbjct: 65  LVMERMLQMQKIREEQ-AKLKKGIHLIPKTA 94


>ref|XP_004140392.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 7-like isoform 1 [Cucumis sativus]
          Length = 100

 Score =  156 bits (394), Expect = 3e-36
 Identities = 75/91 (82%), Positives = 81/91 (89%)
 Frame = +1

Query: 49  GSSKKMIATQQEMVDAKVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYE 228
           GSSKKMIATQ EMV+A+VPIPYRDQCAHLLIPLNKCRQSEFYLPWKCE+ERHSYEKCEYE
Sbjct: 5   GSSKKMIATQAEMVEARVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCEDERHSYEKCEYE 64

Query: 229 LVMERMLQMQKIKQNQELKSSGGVPLIPNPA 321
           LVMERMLQMQKI++ Q  K   G+ LIP  A
Sbjct: 65  LVMERMLQMQKIREEQ-AKLKKGIHLIPKTA 94


>ref|XP_002315832.1| predicted protein [Populus trichocarpa] gi|222864872|gb|EEF02003.1|
           predicted protein [Populus trichocarpa]
          Length = 101

 Score =  154 bits (390), Expect = 7e-36
 Identities = 76/97 (78%), Positives = 85/97 (87%), Gaps = 4/97 (4%)
 Frame = +1

Query: 49  GSSKKMIATQQEMVDAKVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYE 228
           GSSK MIATQ+EMV+A+VPIPYRDQCAHLLIPLNKCRQSEF+LPWKCENERH YEKCEYE
Sbjct: 5   GSSKPMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRQSEFFLPWKCENERHVYEKCEYE 64

Query: 229 LVMERMLQMQKIKQNQ-ELKSS---GGVPLIPNPAAA 327
           LVMERMLQMQKI++ + +LK S   G +PLIP  A A
Sbjct: 65  LVMERMLQMQKIREAEAKLKQSHKQGTIPLIPKTANA 101


>ref|XP_002521886.1| conserved hypothetical protein [Ricinus communis]
           gi|223538924|gb|EEF40522.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 102

 Score =  150 bits (378), Expect = 2e-34
 Identities = 71/98 (72%), Positives = 81/98 (82%), Gaps = 5/98 (5%)
 Frame = +1

Query: 49  GSSKKMIATQQEMVDAKVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYE 228
           GSSK MIATQ EM +A+VPIPYRDQCAHLLIPLNKCRQ+EFYLPWKCENERH+YEKCEYE
Sbjct: 5   GSSKPMIATQAEMAEARVPIPYRDQCAHLLIPLNKCRQAEFYLPWKCENERHAYEKCEYE 64

Query: 229 LVMERMLQMQKIKQNQEL-----KSSGGVPLIPNPAAA 327
           LVMERMLQMQKI++ + +     K +  + LIP  A A
Sbjct: 65  LVMERMLQMQKIREQEAMLKQPNKGNTTISLIPKTAGA 102


>ref|XP_002311558.1| predicted protein [Populus trichocarpa] gi|118482879|gb|ABK93354.1|
           unknown [Populus trichocarpa]
           gi|222851378|gb|EEE88925.1| predicted protein [Populus
           trichocarpa]
          Length = 101

 Score =  149 bits (377), Expect = 2e-34
 Identities = 73/97 (75%), Positives = 84/97 (86%), Gaps = 4/97 (4%)
 Frame = +1

Query: 49  GSSKKMIATQQEMVDAKVPIPYRDQCAHLLIPLNKCRQSEFYLPWKCENERHSYEKCEYE 228
           GSSK MIATQ+EMV+A+VPIPYRDQCAHLLIPLNKCR +EF+LPWKCE+ERH YEKCEYE
Sbjct: 5   GSSKPMIATQEEMVEARVPIPYRDQCAHLLIPLNKCRHAEFFLPWKCESERHIYEKCEYE 64

Query: 229 LVMERMLQMQKIKQNQ-ELKSS---GGVPLIPNPAAA 327
           LVMERMLQMQKI++ + +LK S   G +PLIP  A A
Sbjct: 65  LVMERMLQMQKIREAEAKLKQSHKQGTIPLIPKTANA 101


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