BLASTX nr result

ID: Cnidium21_contig00014649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014649
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144196.1| PREDICTED: 60S ribosomal protein L17-2-like ...    60   1e-07
emb|CBI15653.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like ...    60   2e-07
ref|XP_002318720.1| predicted protein [Populus trichocarpa] gi|1...    59   3e-07
ref|XP_004135316.1| PREDICTED: 60S ribosomal protein L17-2-like ...    59   4e-07

>ref|XP_004144196.1| PREDICTED: 60S ribosomal protein L17-2-like [Cucumis sativus]
           gi|449489236|ref|XP_004158255.1| PREDICTED: 60S
           ribosomal protein L17-2-like [Cucumis sativus]
          Length = 183

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 283 HIELTLSEKEEPVKKEPDTQLASRKPRGNQPLRSGASS 170
           HIEL LSEKEEPVKKEP+TQLA+ KP+  Q +RSGASS
Sbjct: 146 HIELILSEKEEPVKKEPETQLATGKPKKGQAIRSGASS 183


>emb|CBI15653.3| unnamed protein product [Vitis vinifera]
          Length = 209

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = -3

Query: 283 HIELTLSEKEEPVKKEPDTQLASRKPRGNQPLRSGASS 170
           HIEL LSEKEEPV+KEPDTQLA RK +  Q LRSGASS
Sbjct: 172 HIELILSEKEEPVQKEPDTQLAPRKTKKTQALRSGASS 209


>ref|XP_002283698.1| PREDICTED: 60S ribosomal protein L17-2-like isoform 1 [Vitis
           vinifera] gi|359491070|ref|XP_003634214.1| PREDICTED:
           60S ribosomal protein L17-2-like isoform 2 [Vitis
           vinifera]
          Length = 183

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = -3

Query: 283 HIELTLSEKEEPVKKEPDTQLASRKPRGNQPLRSGASS 170
           HIEL LSEKEEPV+KEPDTQLA RK +  Q LRSGASS
Sbjct: 146 HIELILSEKEEPVQKEPDTQLAPRKTKKTQALRSGASS 183


>ref|XP_002318720.1| predicted protein [Populus trichocarpa] gi|118484704|gb|ABK94222.1|
           unknown [Populus trichocarpa]
           gi|222859393|gb|EEE96940.1| predicted protein [Populus
           trichocarpa]
          Length = 181

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 31/38 (81%), Positives = 33/38 (86%)
 Frame = -3

Query: 283 HIELTLSEKEEPVKKEPDTQLASRKPRGNQPLRSGASS 170
           HIELTLSEKEEPVKKE DTQ+A RKP+G   LRSGASS
Sbjct: 146 HIELTLSEKEEPVKKEADTQIAPRKPKG--ALRSGASS 181


>ref|XP_004135316.1| PREDICTED: 60S ribosomal protein L17-2-like [Cucumis sativus]
           gi|449494927|ref|XP_004159685.1| PREDICTED: 60S
           ribosomal protein L17-2-like [Cucumis sativus]
          Length = 183

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = -3

Query: 283 HIELTLSEKEEPVKKEPDTQLASRKPRGNQPLRSGASS 170
           HIEL LSEKEEPVKKEP+TQLA+ K + +Q LRSGASS
Sbjct: 146 HIELILSEKEEPVKKEPETQLATSKSKKSQALRSGASS 183


Top