BLASTX nr result
ID: Cnidium21_contig00014548
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00014548 (831 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi... 376 e-102 ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containi... 367 2e-99 emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera] 361 1e-97 ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|2... 356 4e-96 ref|NP_188050.1| pentatricopeptide repeat-containing protein [Ar... 348 1e-93 >ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330 [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera] Length = 652 Score = 376 bits (965), Expect = e-102 Identities = 172/233 (73%), Positives = 199/233 (85%) Frame = +1 Query: 13 SCLVDLLGRSGKIKEALEVVKKMPMKPSSSIWGSLLNSCRLHGNVSLAELIAAKLFELEP 192 +CLVD+LGR+G+IKEALE+VK MP KP+ SIWGSLLNSCRLHGNV LAE +A +LFELEP Sbjct: 420 ACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEP 479 Query: 193 SNPGNYVMLSNIYAKAMMWEGVKNVRKLMEIEGLQKEPGCSWMQIKHRVHTFVAGGSSAF 372 +N GNYVMLSNIYA A MWE VK VR+ ME G+ KE GCSW+QIK ++HTFVAGGS+ F Sbjct: 480 NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEF 539 Query: 373 RDTEEFRKVWNDLMETMERIGYVPDTRSVLHDVNEEMKTEWVCGHSERLATMFGLIHTGS 552 R++ E++KVW LME ME +GYVPDT VLHDV+EEM+ WVCGHSERLATMF LI+T S Sbjct: 540 RNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS 599 Query: 553 GMPIRITKNLRVCLDCHMWMKYVSKVTNRVIILRDTNRFHHFKQGTCSCKDYW 711 GMPIRITKNLRVC+DCH W+K +SKVT RVI+LRDTNRFHHFK G CSCKDYW Sbjct: 600 GMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKDYW 652 >ref|XP_003530188.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330-like [Glycine max] Length = 650 Score = 367 bits (941), Expect = 2e-99 Identities = 162/233 (69%), Positives = 201/233 (86%) Frame = +1 Query: 13 SCLVDLLGRSGKIKEALEVVKKMPMKPSSSIWGSLLNSCRLHGNVSLAELIAAKLFELEP 192 +CLVD+LGRSGK EAL V + +PM+PS SIWGSLLNSCRL+GNV+LAE++A +LFE+EP Sbjct: 418 ACLVDILGRSGKFDEALSVAENIPMRPSGSIWGSLLNSCRLYGNVALAEVVAERLFEIEP 477 Query: 193 SNPGNYVMLSNIYAKAMMWEGVKNVRKLMEIEGLQKEPGCSWMQIKHRVHTFVAGGSSAF 372 +NPGNYVMLSNIYA A MWE VK VR++M + G++K+ GCSW+QIKH++HTFVAGGSS F Sbjct: 478 NNPGNYVMLSNIYANAGMWEDVKRVREMMALTGMKKDAGCSWIQIKHKIHTFVAGGSSDF 537 Query: 373 RDTEEFRKVWNDLMETMERIGYVPDTRSVLHDVNEEMKTEWVCGHSERLATMFGLIHTGS 552 R + E++K+WN+L ++ +GYVP+T VLHD+NEEMK WVC HSERLA +F LI+TG+ Sbjct: 538 RCSAEYKKIWNELSNAVKNLGYVPNTGVVLHDINEEMKAVWVCEHSERLAAVFALINTGA 597 Query: 553 GMPIRITKNLRVCLDCHMWMKYVSKVTNRVIILRDTNRFHHFKQGTCSCKDYW 711 GMPIRITKNLRVC+DCH WMK VSKVT R+I+LRDTNRFHHF+ G+CSCKDYW Sbjct: 598 GMPIRITKNLRVCVDCHSWMKAVSKVTRRLIVLRDTNRFHHFENGSCSCKDYW 650 >emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera] Length = 773 Score = 361 bits (927), Expect = 1e-97 Identities = 167/228 (73%), Positives = 194/228 (85%) Frame = +1 Query: 13 SCLVDLLGRSGKIKEALEVVKKMPMKPSSSIWGSLLNSCRLHGNVSLAELIAAKLFELEP 192 +CLVD+LGR+G+IKEALE+VK MP KP+ SIWGSLLNSCRLHGNV LAE +A +LFELEP Sbjct: 419 ACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAVAKRLFELEP 478 Query: 193 SNPGNYVMLSNIYAKAMMWEGVKNVRKLMEIEGLQKEPGCSWMQIKHRVHTFVAGGSSAF 372 +N GNYVMLSNIYA A MWE VK VR+ ME G+ KE GCSW+QIK ++HTFVAGGS+ F Sbjct: 479 NNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHTFVAGGSNEF 538 Query: 373 RDTEEFRKVWNDLMETMERIGYVPDTRSVLHDVNEEMKTEWVCGHSERLATMFGLIHTGS 552 R++ E++KVW LME ME +GYVPDT VLHDV+EEM+ WVCGHSERLATMF LI+T S Sbjct: 539 RNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLATMFALINTAS 598 Query: 553 GMPIRITKNLRVCLDCHMWMKYVSKVTNRVIILRDTNRFHHFKQGTCS 696 GMPIRITKNLRVC+DCH W+K +SKVT RVI+LRDTNRFHHFK G CS Sbjct: 599 GMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCS 646 Score = 66.2 bits (160), Expect = 8e-09 Identities = 30/39 (76%), Positives = 33/39 (84%) Frame = +1 Query: 517 LATMFGLIHTGSGMPIRITKNLRVCLDCHMWMKYVSKVT 633 LATMF LI+T SGMPIRITKNL VC+DCH W+K VSK T Sbjct: 700 LATMFALINTASGMPIRITKNLHVCVDCHSWVKIVSKNT 738 >ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|222843383|gb|EEE80930.1| predicted protein [Populus trichocarpa] Length = 504 Score = 356 bits (913), Expect = 4e-96 Identities = 160/233 (68%), Positives = 192/233 (82%) Frame = +1 Query: 13 SCLVDLLGRSGKIKEALEVVKKMPMKPSSSIWGSLLNSCRLHGNVSLAELIAAKLFELEP 192 +CLVD+LGR+G+I AL VVK MPMK S SIWGSLLNSCRLH V LAE IA +LFELEP Sbjct: 272 ACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLHNEVPLAEAIANRLFELEP 331 Query: 193 SNPGNYVMLSNIYAKAMMWEGVKNVRKLMEIEGLQKEPGCSWMQIKHRVHTFVAGGSSAF 372 NPGNYVMLSNIYA A MW+ V VR++M+ ++KE GCSW+Q+K+++H+FVAGG F Sbjct: 332 YNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIRKEAGCSWIQVKNKIHSFVAGGGFEF 391 Query: 373 RDTEEFRKVWNDLMETMERIGYVPDTRSVLHDVNEEMKTEWVCGHSERLATMFGLIHTGS 552 R+++E++K+WN L E ME GY+P+T VLHDVNEE K WVCGHSERLAT+F LIHT + Sbjct: 392 RNSDEYKKIWNKLREAMEEFGYIPNTDVVLHDVNEETKAMWVCGHSERLATVFSLIHTAA 451 Query: 553 GMPIRITKNLRVCLDCHMWMKYVSKVTNRVIILRDTNRFHHFKQGTCSCKDYW 711 GMPIRITKNLRVC+DCH W+K VS+VT RVI+LRDTNRFHHFK+G CSC DYW Sbjct: 452 GMPIRITKNLRVCVDCHSWIKIVSRVTGRVIVLRDTNRFHHFKEGACSCNDYW 504 >ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g14330 gi|332641981|gb|AEE75502.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana] Length = 710 Score = 348 bits (892), Expect = 1e-93 Identities = 154/233 (66%), Positives = 191/233 (81%) Frame = +1 Query: 13 SCLVDLLGRSGKIKEALEVVKKMPMKPSSSIWGSLLNSCRLHGNVSLAELIAAKLFELEP 192 +CLVD+LGR+GKIKEA++V++ MP KPS+SIWGSLLNSCRLHGNVS+ E+ A +LF LEP Sbjct: 478 ACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRLHGNVSVGEIAAKELFVLEP 537 Query: 193 SNPGNYVMLSNIYAKAMMWEGVKNVRKLMEIEGLQKEPGCSWMQIKHRVHTFVAGGSSAF 372 NPGNYVM+SNIYA A MW+ V +R++M+ G++KE GCSW+Q+K ++ FVAGG F Sbjct: 538 HNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCSWVQVKDKIQIFVAGGGYEF 597 Query: 373 RDTEEFRKVWNDLMETMERIGYVPDTRSVLHDVNEEMKTEWVCGHSERLATMFGLIHTGS 552 R+++E++KVW +L E +E+ GY P+T VLHDV+EE K WVCGHSERLAT + LIHTG Sbjct: 598 RNSDEYKKVWTELQEAIEKSGYSPNTSVVLHDVDEETKANWVCGHSERLATTYSLIHTGE 657 Query: 553 GMPIRITKNLRVCLDCHMWMKYVSKVTNRVIILRDTNRFHHFKQGTCSCKDYW 711 G+PIRITKNLRVC DCH WMK VS+VT RVI+LRDT RFHHF G CSCKDYW Sbjct: 658 GVPIRITKNLRVCADCHSWMKIVSQVTRRVIVLRDTKRFHHFVDGICSCKDYW 710