BLASTX nr result

ID: Cnidium21_contig00014529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014529
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group] g...    93   6e-17
ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group] g...    93   6e-17
ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleo...    93   6e-17
ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleo...    93   6e-17
gb|ABK22541.1| unknown [Picea sitchensis]                              93   6e-17

>ref|NP_001068396.1| Os11g0657300 [Oryza sativa Japonica Group]
           gi|77552372|gb|ABA95169.1| small nuclear
           ribonucleoprotein F, putative, expressed [Oryza sativa
           Japonica Group] gi|113645618|dbj|BAF28759.1|
           Os11g0657300 [Oryza sativa Japonica Group]
           gi|215693012|dbj|BAG88432.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|218186140|gb|EEC68567.1| hypothetical protein
           OsI_36896 [Oryza sativa Indica Group]
           gi|222616369|gb|EEE52501.1| hypothetical protein
           OsJ_34703 [Oryza sativa Japonica Group]
          Length = 86

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 669 MATVPVNPKPFLNNLTGKRVIVKLKWGMEYKGFLVSVDSYMNLQLA 532
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA 46


>ref|NP_001046068.1| Os02g0177500 [Oryza sativa Japonica Group]
           gi|50252055|dbj|BAD27986.1| putative small nuclear
           ribonucleoprotein polypeptide F [Oryza sativa Japonica
           Group] gi|113535599|dbj|BAF07982.1| Os02g0177500 [Oryza
           sativa Japonica Group]
          Length = 86

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 669 MATVPVNPKPFLNNLTGKRVIVKLKWGMEYKGFLVSVDSYMNLQLA 532
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA 46


>ref|XP_003570509.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 669 MATVPVNPKPFLNNLTGKRVIVKLKWGMEYKGFLVSVDSYMNLQLA 532
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA 46


>ref|XP_003563369.1| PREDICTED: probable small nuclear ribonucleoprotein F-like
           [Brachypodium distachyon]
          Length = 86

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 669 MATVPVNPKPFLNNLTGKRVIVKLKWGMEYKGFLVSVDSYMNLQLA 532
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA 46


>gb|ABK22541.1| unknown [Picea sitchensis]
          Length = 84

 Score = 92.8 bits (229), Expect = 6e-17
 Identities = 44/46 (95%), Positives = 45/46 (97%)
 Frame = -1

Query: 669 MATVPVNPKPFLNNLTGKRVIVKLKWGMEYKGFLVSVDSYMNLQLA 532
           MATVPVNPKPFLNNLTGK VIVKLKWGMEYKG+LVSVDSYMNLQLA
Sbjct: 1   MATVPVNPKPFLNNLTGKPVIVKLKWGMEYKGYLVSVDSYMNLQLA 46


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