BLASTX nr result

ID: Cnidium21_contig00014522 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014522
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAQ24533.1| P18 [Solanum chacoense]                                199   1e-48
gb|ACN40741.1| unknown [Picea sitchensis]                             190   4e-46
gb|ABK22701.1| unknown [Picea sitchensis] gi|116791545|gb|ABK260...   190   4e-46
ref|XP_002277566.1| PREDICTED: histone deacetylase complex subun...   187   3e-45
ref|XP_004147963.1| PREDICTED: histone deacetylase complex subun...   186   6e-45

>gb|AAQ24533.1| P18 [Solanum chacoense]
          Length = 156

 Score =  199 bits (505), Expect = 1e-48
 Identities = 97/137 (70%), Positives = 112/137 (81%)
 Frame = +3

Query: 81  GPPYHSRPAKPFHHQPIDREKTCPLLLRVFTKVGAHHTEDEFSVRGKEPKDEVQIYTWKD 260
           GPP      +P    P+DREKTCPLLLRVFTKVG HH  +EF+VRGKEPKDEVQIYTW D
Sbjct: 21  GPPPQRIAPRPV---PVDREKTCPLLLRVFTKVGGHHNVNEFAVRGKEPKDEVQIYTWMD 77

Query: 261 ATLRELTDLVKEVAPEANKKDATLSFAFVYPCKTGRLLVRKVGRTFSHPDPRRPDNGNMS 440
           ATLRELTDLVKEVAPEA ++DA LSFAFVYP K GR +VR+VG TFS+P+ RRPDNG+ +
Sbjct: 78  ATLRELTDLVKEVAPEARRRDAILSFAFVYPDKRGRFVVREVGTTFSYPNMRRPDNGSKT 137

Query: 441 LRDFDFEIGDYLDVAIL 491
           L +  F+IGDYLDVAI+
Sbjct: 138 LSELKFQIGDYLDVAIM 154


>gb|ACN40741.1| unknown [Picea sitchensis]
          Length = 150

 Score =  190 bits (483), Expect = 4e-46
 Identities = 94/141 (66%), Positives = 113/141 (80%)
 Frame = +3

Query: 69  RVQPGPPYHSRPAKPFHHQPIDREKTCPLLLRVFTKVGAHHTEDEFSVRGKEPKDEVQIY 248
           R  PGP   SRP        +DREKTCPLLLRVFTK+G+HHT ++F+VRGKEPKDEVQIY
Sbjct: 17  RAPPGP---SRPPPL-----VDREKTCPLLLRVFTKIGSHHTAEDFAVRGKEPKDEVQIY 68

Query: 249 TWKDATLRELTDLVKEVAPEANKKDATLSFAFVYPCKTGRLLVRKVGRTFSHPDPRRPDN 428
           TW+DATLRELTDLVKEVAP A ++DA LSFAFVYP + GR +VR+VG T+++P+ RRPD 
Sbjct: 69  TWRDATLRELTDLVKEVAPAARRRDAKLSFAFVYPDRRGRNVVRQVGVTYAYPNARRPDE 128

Query: 429 GNMSLRDFDFEIGDYLDVAIL 491
           GN +L D  F+ GD+LDVAIL
Sbjct: 129 GNKALADLSFQTGDFLDVAIL 149


>gb|ABK22701.1| unknown [Picea sitchensis] gi|116791545|gb|ABK26020.1| unknown
           [Picea sitchensis]
          Length = 150

 Score =  190 bits (483), Expect = 4e-46
 Identities = 94/141 (66%), Positives = 113/141 (80%)
 Frame = +3

Query: 69  RVQPGPPYHSRPAKPFHHQPIDREKTCPLLLRVFTKVGAHHTEDEFSVRGKEPKDEVQIY 248
           R  PGP   SRP        +DREKTCPLLLRVFTK+G+HHT ++F+VRGKEPKDEVQIY
Sbjct: 17  RAPPGP---SRPPPL-----VDREKTCPLLLRVFTKIGSHHTAEDFAVRGKEPKDEVQIY 68

Query: 249 TWKDATLRELTDLVKEVAPEANKKDATLSFAFVYPCKTGRLLVRKVGRTFSHPDPRRPDN 428
           TW+DATLRELTDLVKEVAP A ++DA LSFAFVYP + GR +VR+VG T+++P+ RRPD 
Sbjct: 69  TWRDATLRELTDLVKEVAPAARRRDAKLSFAFVYPDRRGRNVVRQVGVTYAYPNARRPDE 128

Query: 429 GNMSLRDFDFEIGDYLDVAIL 491
           GN +L D  F+ GD+LDVAIL
Sbjct: 129 GNKALADLSFQTGDFLDVAIL 149


>ref|XP_002277566.1| PREDICTED: histone deacetylase complex subunit SAP18 [Vitis
           vinifera] gi|296089118|emb|CBI38821.3| unnamed protein
           product [Vitis vinifera]
          Length = 152

 Score =  187 bits (476), Expect = 3e-45
 Identities = 97/154 (62%), Positives = 119/154 (77%), Gaps = 1/154 (0%)
 Frame = +3

Query: 33  GQRRGGRAFNA-GRVQPGPPYHSRPAKPFHHQPIDREKTCPLLLRVFTKVGAHHTEDEFS 209
           G +R GR     GR  P PP   RP      +P+DREKTCPLLLRVFTK+G HH++++F+
Sbjct: 7   GPKRAGRPLPPPGRGPPPPP---RP----RFEPVDREKTCPLLLRVFTKIGCHHSKEDFA 59

Query: 210 VRGKEPKDEVQIYTWKDATLRELTDLVKEVAPEANKKDATLSFAFVYPCKTGRLLVRKVG 389
           VRGKEPKDEVQIYTWKDATLRELTDLVKEVAP A ++DA LSFAFVYP   GR ++R+VG
Sbjct: 60  VRGKEPKDEVQIYTWKDATLRELTDLVKEVAPAARRRDAILSFAFVYPDTNGRFVLREVG 119

Query: 390 RTFSHPDPRRPDNGNMSLRDFDFEIGDYLDVAIL 491
           +TFS+ + +R D+G  +L +  F+IGDYLDVAIL
Sbjct: 120 KTFSYGNGKRLDDGK-ALAELGFQIGDYLDVAIL 152


>ref|XP_004147963.1| PREDICTED: histone deacetylase complex subunit SAP18-like [Cucumis
           sativus] gi|449494271|ref|XP_004159498.1| PREDICTED:
           histone deacetylase complex subunit SAP18-like [Cucumis
           sativus]
          Length = 166

 Score =  186 bits (473), Expect = 6e-45
 Identities = 95/151 (62%), Positives = 116/151 (76%)
 Frame = +3

Query: 39  RRGGRAFNAGRVQPGPPYHSRPAKPFHHQPIDREKTCPLLLRVFTKVGAHHTEDEFSVRG 218
           R  GR          PP + RP      +P+DREKTCPLLLRVFTKVG HHT+++F+VRG
Sbjct: 21  RPSGRPLPPPSQTKAPPPNPRP----RFEPVDREKTCPLLLRVFTKVGGHHTDEDFAVRG 76

Query: 219 KEPKDEVQIYTWKDATLRELTDLVKEVAPEANKKDATLSFAFVYPCKTGRLLVRKVGRTF 398
           KEPKDEVQIYTWKDATLRELTDLVKEVAPEA +++A LSFAFVYP K GR ++++VG T 
Sbjct: 77  KEPKDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFAFVYPDKRGRFVLKQVGMTH 136

Query: 399 SHPDPRRPDNGNMSLRDFDFEIGDYLDVAIL 491
           S+ + RR D+ + +L + DF+IGDYLDVAIL
Sbjct: 137 SYGNGRRLDD-SKALGELDFQIGDYLDVAIL 166


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