BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014504
         (723 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation spec...   387   e-106
ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation spec...   384   e-104
gb|AFK44906.1| unknown [Medicago truncatula]                          384   e-104
ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation spec...   382   e-104
ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, p...   380   e-103

>ref|XP_002269748.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 isoform 1 [Vitis vinifera]
           gi|297745235|emb|CBI40315.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  387 bits (995), Expect = e-106
 Identities = 183/198 (92%), Positives = 191/198 (96%)
 Frame = +3

Query: 78  MVTSPVVNTYPLASYTFGVKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN 257
           MVTSPVVNTYPL+SYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVE IL+VQEHN
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 258 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATSPGIQPEWQIGECVATWW 437
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAA S  +QP+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSLALQPDWQIGECVAIWW 120

Query: 438 RPNFETVMYPYCPPHIAKPKECKKIFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 617
           RPNFET+MYPYCPPHI KPKECKK+F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 618 PVISTIPQQLSRFQFSMM 671
           PVISTIPQQLSRFQF+MM
Sbjct: 181 PVISTIPQQLSRFQFNMM 198


>ref|XP_004133873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5-like [Cucumis sativus]
           gi|449480168|ref|XP_004155818.1| PREDICTED: cleavage and
           polyadenylation specificity factor subunit 5-like
           [Cucumis sativus]
          Length = 200

 Score =  384 bits (986), Expect = e-104
 Identities = 180/198 (90%), Positives = 190/198 (95%)
 Frame = +3

Query: 78  MVTSPVVNTYPLASYTFGVKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN 257
           MVTSPVVNTYPL+SYTFG KEPK+EKDTSVADRLARMKVNYMKEGMRTSVE IL+VQEH 
Sbjct: 1   MVTSPVVNTYPLSSYTFGTKEPKLEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHK 60

Query: 258 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATSPGIQPEWQIGECVATWW 437
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A SP +QP+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPSLQPDWQIGECVAIWW 120

Query: 438 RPNFETVMYPYCPPHIAKPKECKKIFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 617
           RPNFETVMYPYCPPHI KPKECKK+F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 618 PVISTIPQQLSRFQFSMM 671
           PVISTIPQQLSRFQF+M+
Sbjct: 181 PVISTIPQQLSRFQFNMI 198


>gb|AFK44906.1| unknown [Medicago truncatula]
          Length = 200

 Score =  384 bits (985), Expect = e-104
 Identities = 180/198 (90%), Positives = 189/198 (95%)
 Frame = +3

Query: 78  MVTSPVVNTYPLASYTFGVKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN 257
           M+ S VVNTYPL+SYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGIL+VQEHN
Sbjct: 1   MIPSQVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN 60

Query: 258 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATSPGIQPEWQIGECVATWW 437
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A SPG+ P+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPGLVPDWQIGECVAIWW 120

Query: 438 RPNFETVMYPYCPPHIAKPKECKKIFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 617
           RPNFET+MYPYCPPHI KPKECKK+FLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 618 PVISTIPQQLSRFQFSMM 671
           PVISTIPQQLSRFQF M+
Sbjct: 181 PVISTIPQQLSRFQFKMI 198


>ref|XP_002267257.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           5 [Vitis vinifera] gi|147788664|emb|CAN61008.1|
           hypothetical protein VITISV_016616 [Vitis vinifera]
           gi|302143896|emb|CBI22757.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  382 bits (981), Expect = e-104
 Identities = 179/200 (89%), Positives = 191/200 (95%)
 Frame = +3

Query: 78  MVTSPVVNTYPLASYTFGVKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN 257
           M+TSPVVNTYPL+SYTFG KEPKMEKDTSVADRLARM+VNYMKEGMRT+V+ IL+VQEH 
Sbjct: 1   MLTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMRVNYMKEGMRTTVDAILLVQEHT 60

Query: 258 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATSPGIQPEWQIGECVATWW 437
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAA SPG+QP+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAANSPGLQPDWQIGECVAIWW 120

Query: 438 RPNFETVMYPYCPPHIAKPKECKKIFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 617
           RPNFETVMYPYCPPHI KPKECKK+F+VHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 618 PVISTIPQQLSRFQFSMMQA 677
           PVISTIP  LSRFQF+M+ A
Sbjct: 181 PVISTIPLHLSRFQFNMIAA 200


>ref|XP_002510802.1| pre-mRNA cleavage factor im, 25kD subunit, putative [Ricinus
           communis] gi|223549917|gb|EEF51404.1| pre-mRNA cleavage
           factor im, 25kD subunit, putative [Ricinus communis]
          Length = 200

 Score =  380 bits (976), Expect = e-103
 Identities = 179/198 (90%), Positives = 188/198 (94%)
 Frame = +3

Query: 78  MVTSPVVNTYPLASYTFGVKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILMVQEHN 257
           MV S VVNTYPL+SYTFG KEPKMEKDTSVADRLARMKVNYMKEGMRTSVE IL+VQEHN
Sbjct: 1   MVNSSVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEAILLVQEHN 60

Query: 258 HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLAATSPGIQPEWQIGECVATWW 437
           HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKL+SKL A SP + P+WQIGECVA WW
Sbjct: 61  HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLTSKLGANSPALVPDWQIGECVAIWW 120

Query: 438 RPNFETVMYPYCPPHIAKPKECKKIFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 617
           RPNFET+MYPYCPPHI KPKECKK+FLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
Sbjct: 121 RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG 180

Query: 618 PVISTIPQQLSRFQFSMM 671
           PVISTIPQQLSRFQF+M+
Sbjct: 181 PVISTIPQQLSRFQFNMI 198