BLASTX nr result

ID: Cnidium21_contig00014485 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014485
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331674.1| f-box family protein [Populus trichocarpa] g...   129   2e-28
ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
dbj|BAJ52236.1| hypothetical protein [Pyrus pyrifolia]                 56   3e-06

>ref|XP_002331674.1| f-box family protein [Populus trichocarpa]
           gi|222874093|gb|EEF11224.1| f-box family protein
           [Populus trichocarpa]
          Length = 441

 Score =  129 bits (324), Expect = 2e-28
 Identities = 63/99 (63%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
 Frame = +2

Query: 11  LDRISRLPVKDLLQCKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWRGCLLVQYSVTQA- 187
           ++ +SRLPVK+LLQ K VCKSWYAII+SPNF+SKHL NYY+ +DD   CLLVQY VTQA 
Sbjct: 48  IEILSRLPVKNLLQFKCVCKSWYAIITSPNFISKHLRNYYSKSDD-SDCLLVQYCVTQAG 106

Query: 188 ELQLNELLVDETPRVLADAVLSYMPMRGSYVCGPCDGLY 304
           EL+  ELL+DETP+VL+ A L  MP    ++CGPCDG++
Sbjct: 107 ELESLELLLDETPKVLSYASLGNMPFHSPFLCGPCDGIF 145


>ref|XP_002327664.1| predicted protein [Populus trichocarpa] gi|222836749|gb|EEE75142.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  113 bits (282), Expect = 2e-23
 Identities = 58/100 (58%), Positives = 73/100 (73%), Gaps = 2/100 (2%)
 Frame = +2

Query: 11  LDRISRLPVKDLLQCKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWRGCLLVQYSVTQA- 187
           ++ +SRLPVK+LLQ K VCKSW+AII+SP  +SKHL NYY+ ND    CLL QY VTQA 
Sbjct: 51  IEILSRLPVKNLLQFKCVCKSWHAIITSPKLISKHLRNYYDKNDS--DCLLAQYRVTQAG 108

Query: 188 ELQLNELLVDETP-RVLADAVLSYMPMRGSYVCGPCDGLY 304
           E+   ELLVDETP R L+  +L  MP +  Y+ GPCDG++
Sbjct: 109 EIASFELLVDETPTRALSYGLLDRMPFQSPYIYGPCDGIF 148


>ref|XP_002318138.1| predicted protein [Populus trichocarpa] gi|222858811|gb|EEE96358.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/98 (47%), Positives = 61/98 (62%)
 Frame = +2

Query: 11  LDRISRLPVKDLLQCKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWRGCLLVQYSVTQAE 190
           ++ +S LPVK LLQ K VCKSWY II+S NF+S HLNN+YNN     G LL  +      
Sbjct: 15  IEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKS--GHLLAHFVCP--- 69

Query: 191 LQLNELLVDETPRVLADAVLSYMPMRGSYVCGPCDGLY 304
            QL EL  DE+   L+   L   P+RG  +CGPC+G++
Sbjct: 70  -QLLELFQDESLTDLSHQGLD-PPIRGR-LCGPCNGIF 104


>ref|XP_002318137.1| predicted protein [Populus trichocarpa] gi|222858810|gb|EEE96357.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 47/98 (47%), Positives = 61/98 (62%)
 Frame = +2

Query: 11  LDRISRLPVKDLLQCKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWRGCLLVQYSVTQAE 190
           ++ +S LPVK LLQ K VCKSWY II+S NF+S HLNN+YNN     G LL  +      
Sbjct: 15  IEILSLLPVKTLLQFKCVCKSWYGIITSSNFISLHLNNHYNNIKS--GHLLAHFVCP--- 69

Query: 191 LQLNELLVDETPRVLADAVLSYMPMRGSYVCGPCDGLY 304
            QL EL  DE+   L+   L   P+RG  +CGPC+G++
Sbjct: 70  -QLLELFQDESLTDLSHQGLD-PPIRGR-LCGPCNGIF 104


>dbj|BAJ52236.1| hypothetical protein [Pyrus pyrifolia]
          Length = 400

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/57 (43%), Positives = 39/57 (68%)
 Frame = +2

Query: 5   GSLDRISRLPVKDLLQCKSVCKSWYAIISSPNFVSKHLNNYYNNNDDWRGCLLVQYS 175
           G ++ +SRLP K L++ K + KSW  +I+SP+FV++HLNNY +N      C+L+  S
Sbjct: 13  GVVETLSRLPPKSLMRFKCIRKSWCTLINSPSFVAEHLNNYVDNKLSSSTCILLNRS 69


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