BLASTX nr result

ID: Cnidium21_contig00014457 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014457
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...   178   3e-42
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...   170   9e-40
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...   160   1e-36
emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]   155   2e-35
emb|CAB78071.1| putative protein [Arabidopsis thaliana]               153   9e-35

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score =  178 bits (452), Expect = 3e-42
 Identities = 102/307 (33%), Positives = 168/307 (54%), Gaps = 2/307 (0%)
 Frame = -2

Query: 1337 SGFSNWKRSMMLTLSAKNKIGFVDGSIKKPVSIALDYKAWERCNNLVISWILFNLDGTIA 1158
            S + NWKR ++++LSAKNK+GF+ G+ KKP    L ++ W RC+++V++W+L +L   IA
Sbjct: 57   SSYGNWKRGVLISLSAKNKLGFITGAYKKPDKEDLLFEQWRRCSDMVLAWLLNSLSKEIA 116

Query: 1157 KSVLFLQTAEEIWNDLEERSGFAFMTQVYALEQQLSDISQGSSTVSEFYTQIKTVWDSMN 978
            +SVL+ QTA+E+W +LE+R G    T+++ L+++L+++SQG++ V+ ++ ++K +WD M 
Sbjct: 117  ESVLYSQTAQELWQELEQRYGQIDGTKMFQLQRELNNVSQGTNDVAAYFNKLKRIWDQMK 176

Query: 977  DANPLPHCTCNLCTCNLSXXXXXXXXXXXXXQFMMKLSDKFSAVRGHALMMHHLPNVPQA 798
              N    C+C  C C                QF+M L++ +S +RG+ LMM  LP+  QA
Sbjct: 177  VLNTFMVCSCE-CNCEAKGHNAKMQEDQQLIQFLMGLNEVYSGIRGNILMMKPLPSTAQA 235

Query: 797  CRLFVQEENHKEIGQGN--SHDSMAFMADRRSSYMGNSYRNNNLAKFRPSQNFGNVKDXX 624
              +   EE  + I  GN  S DS AF A   S+   N+ RNN   + R +QN+ N ++  
Sbjct: 236  YSIISHEETQRGIAAGNNVSTDSAAFNA---STQNWNNQRNNYDNRAR-NQNYNNRRNNY 291

Query: 623  XXXXXXXXXXXXXXXXXXXXXXNKKVSKPGANYYCTHCQVPGHSIDRCFQIHGFPPGFKG 444
                                           N YCT+C+  GH  + C +++G     + 
Sbjct: 292  EGRRSNQN-----------------------NSYCTYCRTSGHVREECRKLNG-----RD 323

Query: 443  NRDKRIA 423
            NR++R A
Sbjct: 324  NRNRRPA 330


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
            gi|7268152|emb|CAB78488.1| retrovirus-related like
            polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score =  170 bits (430), Expect = 9e-40
 Identities = 86/297 (28%), Positives = 150/297 (50%)
 Frame = -2

Query: 1337 SGFSNWKRSMMLTLSAKNKIGFVDGSIKKPVSIALDYKAWERCNNLVISWILFNLDGTIA 1158
            S F +W+RS+++ L+ +NK+GF++G+I KP     D+ AW RCN++V +W++ ++D  I 
Sbjct: 55   SDFHSWRRSILMALNVRNKLGFINGTITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIG 114

Query: 1157 KSVLFLQTAEEIWNDLEERSGFAFMTQVYALEQQLSDISQGSSTVSEFYTQIKTVWDSMN 978
            +S+L++ T + IWN+L  R       +++ +EQ+LS I QGS  +S +YT + T+W+   
Sbjct: 115  QSLLYIATVQGIWNNLLSRFKQDDAPRIFDIEQKLSKIEQGSMDISTYYTALLTLWEEHR 174

Query: 977  DANPLPHCTCNLCTCNLSXXXXXXXXXXXXXQFMMKLSDKFSAVRGHALMMHHLPNVPQA 798
            +   LP CTC  C C+ +             +F+ +L++ F   R H LM+  +P + +A
Sbjct: 175  NYVELPVCTCGRCECDAAVKWEHLQQRSRVTKFLKELNEGFDQTRRHILMLKPIPTIKEA 234

Query: 797  CRLFVQEENHKEIGQGNSHDSMAFMADRRSSYMGNSYRNNNLAKFRPSQNFGNVKDXXXX 618
              +  Q+E  + +      DS+AF    +++ M N   N  +A +               
Sbjct: 235  FNMVTQDERQRNVKPLTRVDSVAF----QNTSMINEDENAYVAAY--------------- 275

Query: 617  XXXXXXXXXXXXXXXXXXXXNKKVSKPGANYYCTHCQVPGHSIDRCFQIHGFPPGFK 447
                                     +P     CTHC   GH+I +C+++HG+PPG K
Sbjct: 276  ----------------------NTVRPNQKPICTHCGKVGHTIQKCYKVHGYPPGMK 310


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score =  160 bits (404), Expect = 1e-36
 Identities = 85/299 (28%), Positives = 148/299 (49%), Gaps = 2/299 (0%)
 Frame = -2

Query: 1337 SGFSNWKRSMMLTLSAKNKIGFVDGSIKKPVSIALDYKAWERCNNLVISWILFNLDGTIA 1158
            + + +W RSM+  LSAKNK+ F+DGS  +P+     + AW RCNN+V+SWI+ ++  +I 
Sbjct: 380  TNYHSWSRSMVTALSAKNKVEFIDGSAPEPLKTDRMHGAWCRCNNMVVSWIVHSVATSIR 439

Query: 1157 KSVLFLQTAEEIWNDLEERSGFAFMTQVYALEQQLSDISQGSSTVSEFYTQIKTVWDSMN 978
            +S+L++  AEEIW DL+ R     + ++  L+Q+ S + QG+ TV+E++T ++ +WD + 
Sbjct: 440  QSILWMDKAEEIWRDLKSRYSQGDLLRISDLQQEASTMKQGTLTVTEYFTCLRVIWDEIE 499

Query: 977  DANPLPHCTCNL-CTCNLSXXXXXXXXXXXXXQFMMKLSDKFSAVRGHALMMHHLPNVPQ 801
            +  P P C+CN+ C+CN               QF+  L+++++ +R H L+M  +P + +
Sbjct: 500  NFRPDPICSCNIRCSCNAFTIIAQRKLEDRAMQFLRGLNEQYANIRSHVLLMDPIPTISK 559

Query: 800  ACRLFVQEENHKEIGQGNSHDSMAFMADRRSSYMGNSYRNNNLAKFRPSQ-NFGNVKDXX 624
                                   +++A +    +GN+    N   F P   +    K   
Sbjct: 560  I---------------------FSYVAQQERQLLGNTGPGIN---FEPKDISINAAKTVC 595

Query: 623  XXXXXXXXXXXXXXXXXXXXXXNKKVSKPGANYYCTHCQVPGHSIDRCFQIHGFPPGFK 447
                                      +K      CTHC   GH++D C++ HG+PPG+K
Sbjct: 596  DFCGRIGHVESTCYKKHGVPSNYDARNKSNGRKACTHCGKIGHTVDVCYRKHGYPPGYK 654


>emb|CAN74819.1| hypothetical protein VITISV_034590 [Vitis vinifera]
          Length = 970

 Score =  155 bits (393), Expect = 2e-35
 Identities = 91/299 (30%), Positives = 144/299 (48%), Gaps = 2/299 (0%)
 Frame = -2

Query: 1337 SGFSNWKRSMMLTLSAKNKIGFVDGSIKKPVSIALDYKAWERCNNLVISWILFNLDGTIA 1158
            + ++ W R+M++ L+AKNKI F+DGSI  P S  L +  W RCN++VISWIL ++   IA
Sbjct: 48   ANYNTWSRAMVMALTAKNKISFIDGSIPCPESDDLLFGTWIRCNSMVISWILNSVHKDIA 107

Query: 1157 KSVLFLQTAEEIWNDLEERSGFAFMTQVYALEQQLSDISQGSSTVSEFYTQIKTVWDSMN 978
             S+L+  TA  IWNDL +R   +   +++ +++ L  +SQGS  VS +YT++K +WD + 
Sbjct: 108  DSLLYFDTAVGIWNDLRDRFCQSNGPRIFQIKKHLIALSQGSLDVSTYYTRLKILWDELK 167

Query: 977  DANPLPHCTCNLCTCNLSXXXXXXXXXXXXXQFMMKLSDKFSAVRGHALMMHHLPNVPQA 798
               PLP C C      +              QF+M L++ F   R   LMM  LP + + 
Sbjct: 168  GFQPLPECACGTMKTWME-----FQQQEYVMQFLMGLNESFVQTRSQILMMEPLPPIAKV 222

Query: 797  CRLFVQEENHKEIGQG--NSHDSMAFMADRRSSYMGNSYRNNNLAKFRPSQNFGNVKDXX 624
              L  Q+E    I  G     DS+A      +  +  +  N+   K RP+          
Sbjct: 223  FSLVAQDERQCSINYGLYTPPDSVAANDSNSTVAISAARLNSKPKKDRPT---------- 272

Query: 623  XXXXXXXXXXXXXXXXXXXXXXNKKVSKPGANYYCTHCQVPGHSIDRCFQIHGFPPGFK 447
                                              C+HC + GH++D+C++++G+PPG+K
Sbjct: 273  ----------------------------------CSHCGILGHTVDKCYKLYGYPPGYK 297


>emb|CAB78071.1| putative protein [Arabidopsis thaliana]
          Length = 290

 Score =  153 bits (387), Expect = 9e-35
 Identities = 72/221 (32%), Positives = 122/221 (55%)
 Frame = -2

Query: 1337 SGFSNWKRSMMLTLSAKNKIGFVDGSIKKPVSIALDYKAWERCNNLVISWILFNLDGTIA 1158
            S F +W+RS+ + L+ +NK+GF+DG+I +P S   D  +W RCN++V +W++ ++   I 
Sbjct: 36   SEFHSWRRSVRMALNVRNKLGFIDGTIPQPPSTHRDAGSWSRCNDMVATWLMNSVSKKIG 95

Query: 1157 KSVLFLQTAEEIWNDLEERSGFAFMTQVYALEQQLSDISQGSSTVSEFYTQIKTVWDSMN 978
            +S+LF+ TAE IW +L  R       +V+ +EQ+L  + QGS  VS +YT++ T+W+   
Sbjct: 96   QSLLFMSTAESIWKNLLSRFKQDDAPRVFEIEQRLGSLQQGSMDVSTYYTELVTLWEEYK 155

Query: 977  DANPLPHCTCNLCTCNLSXXXXXXXXXXXXXQFMMKLSDKFSAVRGHALMMHHLPNVPQA 798
            +   LP CTC  C CN S             +F+M L++ + A + H LM+  +P +   
Sbjct: 156  NYIELPLCTCGRCECNASALWEKMQQRSRVTKFLMGLNEAYEATQRHILMLKPIPTIEDV 215

Query: 797  CRLFVQEENHKEIGQGNSHDSMAFMADRRSSYMGNSYRNNN 675
              +  Q+E  K I      D++AF +   + +    Y + N
Sbjct: 216  FNMVAQDERQKSIKPVAKMDNVAFQSSSHTEHNDIGYYSGN 256


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