BLASTX nr result

ID: Cnidium21_contig00014442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014442
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog...   100   9e-20
ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog...    99   3e-19
ref|XP_002512940.1| Splicing factor U2AF-associated protein, put...    99   4e-19
ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog...    99   5e-19
ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog...    99   5e-19

>ref|XP_003536163.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 503

 Score =  100 bits (250), Expect = 9e-20
 Identities = 47/57 (82%), Positives = 51/57 (89%)
 Frame = -1

Query: 339 KDRKDARICIEMMNGRWFGGRQIQASEDDGSVNHAAIRDLEYDAKRLEEFGAELEAD 169
           KDRKDA+ CIE+MNGRWFGGRQI ASEDDGSVNHA +RDLE DA RLE+FGAELE D
Sbjct: 447 KDRKDAQKCIELMNGRWFGGRQIHASEDDGSVNHALVRDLEEDAIRLEQFGAELEGD 503


>ref|XP_003556435.1| PREDICTED: HIV Tat-specific factor 1 homolog [Glycine max]
          Length = 500

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 46/57 (80%), Positives = 50/57 (87%)
 Frame = -1

Query: 339 KDRKDARICIEMMNGRWFGGRQIQASEDDGSVNHAAIRDLEYDAKRLEEFGAELEAD 169
           KDRKDA+ CIE+MNGRWFGGRQI ASEDDGSVNHA +RDLE D  RLE+FGAELE D
Sbjct: 444 KDRKDAQKCIELMNGRWFGGRQIHASEDDGSVNHALVRDLEEDVIRLEQFGAELEGD 500


>ref|XP_002512940.1| Splicing factor U2AF-associated protein, putative [Ricinus
           communis] gi|223547951|gb|EEF49443.1| Splicing factor
           U2AF-associated protein, putative [Ricinus communis]
          Length = 518

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 44/57 (77%), Positives = 51/57 (89%)
 Frame = -1

Query: 339 KDRKDARICIEMMNGRWFGGRQIQASEDDGSVNHAAIRDLEYDAKRLEEFGAELEAD 169
           KDRKDA+ CIE+MNGRWFGGRQ+ ASEDDGSVNHA +RDL+ DA RLE+FGAELE +
Sbjct: 462 KDRKDAQNCIELMNGRWFGGRQVHASEDDGSVNHALVRDLDQDAARLEQFGAELEGE 518


>ref|XP_004166076.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 498

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/57 (78%), Positives = 51/57 (89%)
 Frame = -1

Query: 339 KDRKDARICIEMMNGRWFGGRQIQASEDDGSVNHAAIRDLEYDAKRLEEFGAELEAD 169
           KDRKDA+ CIE+MNGRWFGG+QI ASEDDG VNHA +RDLE DA RLE+FG+ELEAD
Sbjct: 442 KDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 498


>ref|XP_004146418.1| PREDICTED: HIV Tat-specific factor 1 homolog [Cucumis sativus]
          Length = 496

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 45/57 (78%), Positives = 51/57 (89%)
 Frame = -1

Query: 339 KDRKDARICIEMMNGRWFGGRQIQASEDDGSVNHAAIRDLEYDAKRLEEFGAELEAD 169
           KDRKDA+ CIE+MNGRWFGG+QI ASEDDG VNHA +RDLE DA RLE+FG+ELEAD
Sbjct: 440 KDRKDAQKCIELMNGRWFGGKQIHASEDDGLVNHAMVRDLEADAARLEQFGSELEAD 496


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