BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014395
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24961.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-...   118   6e-25
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [...   104   8e-21
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,...    88   6e-16
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,...    88   6e-16

>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
          Length = 319

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/84 (67%), Positives = 71/84 (84%)
 Frame = -3

Query: 252 LTSKEEAEYILLIKEEAKLEAARRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRES 73
           LT +EEAE+ L +KEEA LEAARR+I ET +H+PT NQ A+ VG+ +SSLDK+LC GRES
Sbjct: 23  LTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRES 82

Query: 72  RERITESYKRLVVSIASNYQGRGL 1
           RERI +SY+RLVVSIA+ YQG+GL
Sbjct: 83  RERINQSYRRLVVSIAARYQGKGL 106


>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
          Length = 426

 Score =  118 bits (295), Expect = 6e-25
 Identities = 57/84 (67%), Positives = 71/84 (84%)
 Frame = -3

Query: 252 LTSKEEAEYILLIKEEAKLEAARRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRES 73
           LT +EEAE+ L +KEEA LEAARR+I ET +H+PT NQ A+ VG+ +SSLDK+LC GRES
Sbjct: 130 LTPREEAEFCLCLKEEAGLEAARRRIAETREHEPTSNQWAEAVGIKRSSLDKMLCNGRES 189

Query: 72  RERITESYKRLVVSIASNYQGRGL 1
           RERI +SY+RLVVSIA+ YQG+GL
Sbjct: 190 RERINQSYRRLVVSIAARYQGKGL 213


>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 389

 Score =  104 bits (259), Expect = 8e-21
 Identities = 49/85 (57%), Positives = 70/85 (82%)
 Frame = -3

Query: 255 YLTSKEEAEYILLIKEEAKLEAARRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRE 76
           YL+S EEAE+ L +K+ A++EAARR+I ET +H+PT  QLA+ + + K ++DKILC GR+
Sbjct: 116 YLSSIEEAEFCLCLKDHARVEAARRRIAETQEHEPTSKQLAEALRMRKKNVDKILCKGRQ 175

Query: 75  SRERITESYKRLVVSIASNYQGRGL 1
           SRERIT +Y+RLV+SIA+ Y+G+GL
Sbjct: 176 SRERITGNYRRLVLSIANRYRGKGL 200


>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 341

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = -3

Query: 255 YLTSKEEAEYILLIKEEAKLEAARRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRE 76
           YL+ KEEAE  L +KE   LE  + +I+ET +H+PT  QLA  +G     +D+ILC  RE
Sbjct: 44  YLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARE 103

Query: 75  SRERITESYKRLVVSIASNYQGRGL 1
           SR+R+   Y +LV+SIA+ YQG+GL
Sbjct: 104 SRDRLIRCYSKLVISIAAPYQGKGL 128


>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
           [Cucumis sativus]
          Length = 436

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 42/85 (49%), Positives = 58/85 (68%)
 Frame = -3

Query: 255 YLTSKEEAEYILLIKEEAKLEAARRKILETTKHDPTLNQLADVVGVPKSSLDKILCGGRE 76
           YL+ KEEAE  L +KE   LE  + +I+ET +H+PT  QLA  +G     +D+ILC  RE
Sbjct: 139 YLSPKEEAELCLCLKEAVLLENVKTRIMETQEHEPTNKQLAIAMGTKSGCIDRILCRARE 198

Query: 75  SRERITESYKRLVVSIASNYQGRGL 1
           SR+R+   Y +LV+SIA+ YQG+GL
Sbjct: 199 SRDRLIRCYSKLVISIAAPYQGKGL 223