BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014394
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08419318.1| cuticle collagen 3A3 [Ruminococcaceae bacteri...    74   1e-11
ref|XP_002592998.1| hypothetical protein BRAFLDRAFT_142103 [Bran...    58   7e-07
ref|XP_637736.1| hypothetical protein DDB_G0286467 [Dictyosteliu...    56   3e-06

>ref|ZP_08419318.1| cuticle collagen 3A3 [Ruminococcaceae bacterium D16]
           gi|332518719|gb|EGJ48322.1| cuticle collagen 3A3
           [Ruminococcaceae bacterium D16]
          Length = 384

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 54/185 (29%), Positives = 69/185 (37%), Gaps = 41/185 (22%)
 Frame = +3

Query: 60  WSSWTSICRCRGRDWV--------K*WR------ASISWC*RSNWVN*WS---CWTSICR 188
           WS WTS     GR W         + WR      +   WC   NW + WS   CW   C 
Sbjct: 149 WSHWTS-----GRRWCNWPHRTSGRRWRDRAHRTSGRRWC---NWPH-WSSGHCWH--CG 197

Query: 189 CRRGHWVNSWRAFKRC*RCFWRYAWRAFNCWRATVCWC*WSYRVCCWGATVCWC*RSFW- 365
           C R +  + +R             W  ++ W +   WC WSY    W +   WC  S+W 
Sbjct: 198 CNRSYRTSGYR-------------WCDWSHWSSGHRWCNWSY----WSSGRRWCNWSYWS 240

Query: 366 -GYAWRAFDCWRATVCWC*WSYRV--CCW------------------GATVCWC*RSFW- 479
            GY W  +  W +  CWC W YR   C W                   +  CWC RS W 
Sbjct: 241 SGYRWCNWSYWSSGCCWCNWPYRTSGCHWYNRPHWSSGCRWHNWSHRSSGYCWCYRSHWS 300

Query: 480 -GYAW 491
            G+ W
Sbjct: 301 SGHCW 305


>ref|XP_002592998.1| hypothetical protein BRAFLDRAFT_142103 [Branchiostoma floridae]
           gi|229278222|gb|EEN49009.1| hypothetical protein
           BRAFLDRAFT_142103 [Branchiostoma floridae]
          Length = 144

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 48/147 (32%), Positives = 54/147 (36%), Gaps = 20/147 (13%)
 Frame = +3

Query: 81  CRCR---GRDWVK*WRASISWC*RSNWVN*WSCWTSICRCRRGHWVNSWRAFKRC*RCFW 251
           CRCR   G  W +      SWC    W + W  W S CR              RC R   
Sbjct: 13  CRCRTFCGFSWCR-LVCRFSWCRLVCWCS-WFSWFSWCRL-----------VCRC-RIIC 58

Query: 252 RYAWRAFNC---WRATVCWC*WSYRVC-----CWGATVCWC*RSFW----GYAWRAFDC- 392
             +W    C   W   VCWC W   VC      W   VCW  RS++    G +W    C 
Sbjct: 59  GCSWCRIICGCSWCRLVCWCSWCRLVCGCSWFSWCRLVCW--RSWFRLVCGCSWCRLVCG 116

Query: 393 --WRATVCWC*WS--YRVCCWGATVCW 461
             W   VC C W    R  CW   VCW
Sbjct: 117 CSWCRLVCGCSWFSWCRPVCWCRLVCW 143


>ref|XP_637736.1| hypothetical protein DDB_G0286467 [Dictyostelium discoideum AX4]
           gi|60466195|gb|EAL64258.1| hypothetical protein
           DDB_G0286467 [Dictyostelium discoideum AX4]
          Length = 1214

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 42/136 (30%), Positives = 63/136 (46%), Gaps = 2/136 (1%)
 Frame = -3

Query: 510 SNNRKPSKHSPRNSFNTNIQ*PPNNRPCNSINTNIQ*PSNNRKPSKHSPRNSFNTNIQ*P 331
           +NN   + ++  N+ N N    PNN P N+ N N   P+N      ++P N+ N N    
Sbjct: 592 NNNNNNNNNNNNNNNNNNNNSNPNNNPNNNSNNN---PNNTNNNPNNNPNNNPNNNPNNN 648

Query: 330 PNNRPCNSINTNIQ*PSNN*KPSKHSARNTFNTA*KPSNY*PSDPF--YTDIWKSNNSIN 157
           PNN P N  N N   P+NN   + ++  NT       SN   ++      +   SNNS N
Sbjct: 649 PNNNPNNPNNPNNN-PNNNPNNNNNNCNNTNTNTNNNSNNTSNNNINNSNNNNNSNNSNN 707

Query: 156 *PSYSFNTNLWKPSIT 109
            PS   +T   KP+++
Sbjct: 708 TPSLCSSTPANKPTLS 723