BLASTX nr result
ID: Cnidium21_contig00014384
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00014384 (459 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch... 137 7e-31 ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop... 136 2e-30 ref|XP_002311368.1| predicted protein [Populus trichocarpa] gi|1... 133 1e-29 ref|XP_002519282.1| tex protein-relatedtranscription accessory p... 133 2e-29 ref|XP_002316061.1| predicted protein [Populus trichocarpa] gi|2... 132 3e-29 >sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName: Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1| ribosomal protein S1 [Spinacia oleracea] gi|170143|gb|AAA34045.1| chloroplast ribosomal protein S1 [Spinacia oleracea] Length = 411 Score = 137 bits (346), Expect = 7e-31 Identities = 76/128 (59%), Positives = 92/128 (71%), Gaps = 3/128 (2%) Frame = +2 Query: 83 MAALAHQIGCGLKFQSLSTTHLSKK---THLYKKSRSYIVKAAVTTPGVSVPTAQTRERA 253 MA+LA Q+ GL+ LS ++LSK H K S IV A V+V AQTRER Sbjct: 1 MASLAQQLAGGLRCPPLSNSNLSKPFSPKHTLKPRFSPIVSA------VAVSNAQTRERQ 54 Query: 254 KLKEMFEDAYERCRTNPMEGVPFSIQDFHLAIQEYDYNSEIGTKVTGTVFNTDANGALVD 433 KLK++FEDAYERCR PMEGV F+I DFH A+ +YD+NSE+G++V GTVF TDANGALVD Sbjct: 55 KLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVD 114 Query: 434 ITAKSSAF 457 ITAKSSA+ Sbjct: 115 ITAKSSAY 122 >ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis sativus] Length = 413 Score = 136 bits (342), Expect = 2e-30 Identities = 73/128 (57%), Positives = 96/128 (75%), Gaps = 3/128 (2%) Frame = +2 Query: 83 MAALAHQIGCGLKFQSLSTTHLSK---KTHLYKKSRSYIVKAAVTTPGVSVPTAQTRERA 253 MA++A Q GL+ LS++ LSK H KSRS V+AAV + +P+ QTRER Sbjct: 1 MASMAQQF-TGLRCAPLSSSRLSKPFSSKHFLNKSRSLPVQAAVISG--PIPSPQTRERF 57 Query: 254 KLKEMFEDAYERCRTNPMEGVPFSIQDFHLAIQEYDYNSEIGTKVTGTVFNTDANGALVD 433 KLKE+FE+AYERCR P+EG+ F+++DFH A+++YD++SE+GTKV GTVF TD NGALVD Sbjct: 58 KLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVD 117 Query: 434 ITAKSSAF 457 ITAKSSA+ Sbjct: 118 ITAKSSAY 125 >ref|XP_002311368.1| predicted protein [Populus trichocarpa] gi|118485696|gb|ABK94698.1| unknown [Populus trichocarpa] gi|222851188|gb|EEE88735.1| predicted protein [Populus trichocarpa] Length = 421 Score = 133 bits (335), Expect = 1e-29 Identities = 68/125 (54%), Positives = 90/125 (72%) Frame = +2 Query: 83 MAALAHQIGCGLKFQSLSTTHLSKKTHLYKKSRSYIVKAAVTTPGVSVPTAQTRERAKLK 262 MA+LA Q GL+ +S + L+++ + K + VT V++ AQT+ER KLK Sbjct: 1 MASLAQQFA-GLRCPPISISRLTERAATFSKPKR-AANFVVTAKAVAISNAQTKEREKLK 58 Query: 263 EMFEDAYERCRTNPMEGVPFSIQDFHLAIQEYDYNSEIGTKVTGTVFNTDANGALVDITA 442 ++FE+AYERCRT PMEGV F+++DFH A+ YD+NSEIGT+V GTVF TD NGALVDITA Sbjct: 59 QLFEEAYERCRTAPMEGVSFTVEDFHSALDAYDFNSEIGTRVKGTVFMTDNNGALVDITA 118 Query: 443 KSSAF 457 KSSA+ Sbjct: 119 KSSAY 123 >ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] gi|223541597|gb|EEF43146.1| tex protein-relatedtranscription accessory protein, putative [Ricinus communis] Length = 412 Score = 133 bits (334), Expect = 2e-29 Identities = 72/126 (57%), Positives = 92/126 (73%), Gaps = 1/126 (0%) Frame = +2 Query: 83 MAALAHQIGCGLKFQSLSTTHLSKK-THLYKKSRSYIVKAAVTTPGVSVPTAQTRERAKL 259 MA+LA Q GL+ +LS ++KK + L SR K+ V++ AQT+ER KL Sbjct: 1 MASLAQQF-TGLRCTALSNCRVTKKASSLLSSSRPR--KSRFVVSAVAISNAQTKEREKL 57 Query: 260 KEMFEDAYERCRTNPMEGVPFSIQDFHLAIQEYDYNSEIGTKVTGTVFNTDANGALVDIT 439 K++FEDAYERCRT PMEGV F+ +DFH A+++YD+NSEIGT V GTVF TDANGA+VDIT Sbjct: 58 KQLFEDAYERCRTAPMEGVAFTAEDFHSALEKYDFNSEIGTTVKGTVFMTDANGAVVDIT 117 Query: 440 AKSSAF 457 AKSSA+ Sbjct: 118 AKSSAY 123 >ref|XP_002316061.1| predicted protein [Populus trichocarpa] gi|222865101|gb|EEF02232.1| predicted protein [Populus trichocarpa] Length = 412 Score = 132 bits (332), Expect = 3e-29 Identities = 68/125 (54%), Positives = 89/125 (71%) Frame = +2 Query: 83 MAALAHQIGCGLKFQSLSTTHLSKKTHLYKKSRSYIVKAAVTTPGVSVPTAQTRERAKLK 262 MA+LA Q GL LS++ L+++ + K + + VT V++ QT+ER KLK Sbjct: 1 MASLAQQFA-GLICPPLSSSRLTERAATFSKPKR-AANSVVTAKAVAISNVQTKERHKLK 58 Query: 263 EMFEDAYERCRTNPMEGVPFSIQDFHLAIQEYDYNSEIGTKVTGTVFNTDANGALVDITA 442 E+FE+AYERCRT P+EGV F+++DFH A+ YDYNSEIGT+V GTVF TD NGA VDITA Sbjct: 59 ELFEEAYERCRTAPLEGVSFTLEDFHAALDTYDYNSEIGTRVKGTVFMTDNNGAFVDITA 118 Query: 443 KSSAF 457 KSSA+ Sbjct: 119 KSSAY 123