BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014358
         (1743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]   126   2e-43
emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   113   1e-39
gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]             119   4e-38
gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsi...   119   7e-36
emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]   100   6e-35

>emb|CAN60374.1| hypothetical protein VITISV_001215 [Vitis vinifera]
          Length = 1535

 Score =  126 bits (316), Expect(2) = 2e-43
 Identities = 71/227 (31%), Positives = 117/227 (51%), Gaps = 6/227 (2%)
 Frame = +2

Query: 887  KISLGVLFLKIAKAIWRDLEDRFGYASMPQISSLEQQLVDLHQGQLSVSEFYTKLKTLWD 1066
            +IS  V++   A  +W DL +RF  ++ P+I  +++++    Q QLS+S +YTKLK+LWD
Sbjct: 121  EISDSVIYYATAHEVWEDLCERFSQSNAPRIFEIQREIAYHRQEQLSISVYYTKLKSLWD 180

Query: 1067 SLDDLYHLITCTCEKCTCDVTGRVQKIQQEQRVLQFLMKFNDNFSTVRGNILMMTPLLNV 1246
             L                D +   Q  Q +QR++QFLM  N+++S +RG IL+M PL ++
Sbjct: 181  ELASYN------------DASSGAQ--QDQQRLMQFLMGLNESYSAIRGQILLMNPLPSI 226

Query: 1247 TQAYRLVAQEESHK---EVYQQANHNEIMAFVADKRRFFDNQSGSKFQPNLSSFQSSNTF 1417
             QAY  V QEE  +     +  A  N   A      +  +N +G+        F +S+  
Sbjct: 227  RQAYSSVCQEEKQRLLSATHTTAESNSSAAMAVRSNQMKNNSAGNARSDRSDRFYNSSQD 286

Query: 1418 QKNQSGFTRKPANTY---DCTHCKMNGHSIERCFRIHGFPPGFKSNR 1549
             +      R+  ++     CT+C   GH +E+C+++HG+PPG    R
Sbjct: 287  SRRFDQDKRRSGSSKGRPQCTYCGEMGHFVEKCYQLHGYPPGHPKAR 333



 Score = 78.2 bits (191), Expect(2) = 2e-43
 Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = +1

Query: 625 SNQTNQDPSSLYYIHPSNSCTSQLVSVKFNGEGFNNWKRSMMFSLSAKNKLGFVNGTISI 804
           SN +  D S+ Y+ H S+     L+S   NG+ ++ W+R+M  +L+AKNKLGFVNG I  
Sbjct: 31  SNASKSDLSNPYFTHHSDHPGLVLISKPLNGDNYSAWRRAMALALNAKNKLGFVNGIIKA 90

Query: 805 P--DATSVEY*AWQRYNDLVTSWLLFNLDENIARSVI 909
           P  +    +Y  W R ND+V SW++  L+  I+ SVI
Sbjct: 91  PSEETHPDDYATWSRCNDMVHSWIVNTLNPEISDSVI 127


>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  113 bits (282), Expect(2) = 1e-39
 Identities = 78/265 (29%), Positives = 124/265 (46%), Gaps = 33/265 (12%)
 Frame = +2

Query: 887  KISLGVLFLKIAKAIWRDLEDRFGYASMPQISSLEQQLVDLHQGQLSVSEFYTKLKTLWD 1066
            +I+  V++   A  +W DL +RF  ++ P+I  +++ +  L Q QLSVS +YTKLK LWD
Sbjct: 98   EIANSVIYYSTAHEVWEDLCERFSQSNAPRIFEIQRDIACLRQEQLSVSAYYTKLKGLWD 157

Query: 1067 SLDDLYHLITCTCEKCTCDVTGRVQKIQQEQRVLQFLMKFNDNFSTVRGNILMMTPLLNV 1246
             L   Y+      +             Q +Q+++QFLM  N+++S +RG IL+M PL +V
Sbjct: 158  ELAS-YNAAAHGAQ-------------QDQQKLMQFLMGLNESYSVIRGQILLMNPLPSV 203

Query: 1247 TQAYRLVAQEESHKEVYQQANHNEIMAFVADKRRF-----------FDNQSGSKFQPNLS 1393
             QAY  ++QEE  + +       E  A  A   R             D  +  + +P   
Sbjct: 204  RQAYSTISQEEKQRLLTSTNAAAESAASAAMAVRSNGKSLTTWKDGIDRSNTRRMEPTNR 263

Query: 1394 SFQSSNTFQKNQS-GFTRKPANTYD------------CTHCKMNGHSIERCFRIHGFPP- 1531
               S N  +   S G   +P    D            C++C   GH +++CF++HG+PP 
Sbjct: 264  PSGSQNFLENRSSQGQDGRPFFDQDRRRIGSGRGRPQCSYCGDMGHWVQKCFQLHGYPPD 323

Query: 1532 --------GFKSNRYRKVAALSQHS 1582
                    G  SNR +  +A +Q S
Sbjct: 324  HPKARMNLGSNSNRNKSFSATNQVS 348



 Score = 78.6 bits (192), Expect(2) = 1e-39
 Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 2/97 (2%)
 Frame = +1

Query: 625 SNQTNQDPSSLYYIHPSNSCTSQLVSVKFNGEGFNNWKRSMMFSLSAKNKLGFVNGTISI 804
           +N +  D S+ Y+ H S+     L+S   NG+ ++ WKR+M+ +L++KNKLGFVNG+I  
Sbjct: 8   TNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKA 67

Query: 805 P--DATSVEY*AWQRYNDLVTSWLLFNLDENIARSVI 909
           P  +     Y  W R ND+V SW++  L+  IA SVI
Sbjct: 68  PSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIANSVI 104


>gb|AAF69161.1|AC007915_13 F27F5.19 [Arabidopsis thaliana]
          Length = 1309

 Score =  119 bits (299), Expect(2) = 4e-38
 Identities = 77/260 (29%), Positives = 119/260 (45%)
 Frame = +2

Query: 902  VLFLKIAKAIWRDLEDRFGYASMPQISSLEQQLVDLHQGQLSVSEFYTKLKTLWDSLDDL 1081
            +L+ + A  +W DL  RF  +++P+   LEQ +  L Q  L +S +YTK KTLW  L + 
Sbjct: 150  ILYYEDAVEMWNDLFSRFRVSNLPRKYQLEQSIHTLKQRNLDLSTYYTKKKTLWVQLANT 209

Query: 1082 YHLITCTCEKCTCDVTGRVQKIQQEQRVLQFLMKFNDNFSTVRGNILMMTPLLNVTQAYR 1261
              L   T  KC CD    + +  +  R++QFLM  NDNF+ +RG IL M P   +T+ Y 
Sbjct: 210  RVL---TVRKCNCDHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNMKPRPGLTEIYN 266

Query: 1262 LVAQEESHKEVYQQANHNEIMAFVADKRRFFDNQSGSKFQPNLSSFQSSNTFQKNQSGFT 1441
            ++ Q+ES + V      N   AF        D+Q                       G  
Sbjct: 267  MLDQDESQRLVGSTPLSNLTAAFQVQASPVIDSQVNM------------------AQGSY 308

Query: 1442 RKPANTYDCTHCKMNGHSIERCFRIHGFPPGFKSNRYRKVAALSQHSSDFDQVVEHTDDQ 1621
            +KP     C+ C   GH +++C++ HG+PPG K  + + + + +  S+   Q V  T  +
Sbjct: 309  KKP----KCSFCNKLGHLVDKCYKKHGYPPGSKWTKAQTIGSTNLASTQL-QPVNETPSE 363

Query: 1622 AXXXXXXXXXDQYNHLIELL 1681
                      DQ   +I  L
Sbjct: 364  KTDSCEEFSTDQIQTMISYL 383



 Score = 67.0 bits (162), Expect(2) = 4e-38
 Identities = 32/97 (32%), Positives = 56/97 (57%)
 Frame = +1

Query: 619 SSSNQTNQDPSSLYYIHPSNSCTSQLVSVKFNGEGFNNWKRSMMFSLSAKNKLGFVNGTI 798
           S++ ++  +  S +++H S+     +VS   +G  +NNW  +M  SL AKNKL FV+G++
Sbjct: 55  SAAIESYDNAHSPFFLHSSDHLGLNIVSHVLDGTSYNNWSIAMRMSLDAKNKLSFVDGSL 114

Query: 799 SIPDATSVEY*AWQRYNDLVTSWLLFNLDENIARSVI 909
             PD +   +  W R N +V +WLL  + + I  S++
Sbjct: 115 PRPDVSDRMFRIWSRCNSMVKTWLLNVVSKEIYDSIL 151


>gb|AAD15368.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
            gi|17065314|gb|AAL32811.1| putative retroelement pol
            polyprotein [Arabidopsis thaliana]
            gi|21387147|gb|AAM47977.1| putative retroelement pol
            polyprotein [Arabidopsis thaliana]
          Length = 411

 Score =  119 bits (297), Expect(2) = 7e-36
 Identities = 70/237 (29%), Positives = 117/237 (49%), Gaps = 5/237 (2%)
 Frame = +2

Query: 902  VLFLKIAKAIWRDLEDRFGYASMPQISSLEQQLVDLHQGQLSVSEFYTKLKTLWDSLDDL 1081
            +L+ + A  +W DL  RF   ++P+   LEQ ++ L QG L++S ++TK KTLW+ L   
Sbjct: 149  ILYYEDAVEMWTDLFTRFRVNNLPRKYQLEQAVMTLKQGSLNLSTYFTKKKTLWEQL--- 205

Query: 1082 YHLITCTCEKCTCDVTGRVQKIQQEQRVLQFLMKFNDNFSTVRGNILMMTPLLNVTQAYR 1261
             +  T + +KC CD    + +  +  RV+QFLM  ND+F+T+   IL M P   + + Y 
Sbjct: 206  LNTKTRSVKKCDCDQVKELLEDAETSRVIQFLMGLNDDFNTIMSQILNMKPRPGLNEIYN 265

Query: 1262 LVAQEESHKEVYQQANHNEIMAFVADKRRFFDNQSGSKFQPNLSSFQSSNTFQKNQ---- 1429
            ++ Q+ES + V                         SK  P+ ++FQ+     +      
Sbjct: 266  MLDQDESQRLV----------------------GHASKPTPSPAAFQTQGLLTEQNPILM 303

Query: 1430 -SGFTRKPANTYDCTHCKMNGHSIERCFRIHGFPPGFKSNRYRKVAALSQHSSDFDQ 1597
              G  +KP     CTHC   GH++++C+++HG+PPG      +     S + +  DQ
Sbjct: 304  AQGNFKKP----KCTHCNRIGHTVDKCYKVHGYPPGHPRANQQSSCVGSTNLTSIDQ 356



 Score = 60.1 bits (144), Expect(2) = 7e-36
 Identities = 28/82 (34%), Positives = 47/82 (57%)
 Frame = +1

Query: 664 IHPSNSCTSQLVSVKFNGEGFNNWKRSMMFSLSAKNKLGFVNGTISIPDATSVEY*AWQR 843
           +H S+     +V+   +G  +N+W  +M  SL AKNKLGFV+G++  P      +  W R
Sbjct: 69  LHSSDHPGLSIVAHVLDGSNYNSWSIAMRISLDAKNKLGFVDGSLLRPSVDDSTFRIWSR 128

Query: 844 YNDLVTSWLLFNLDENIARSVI 909
            N +V SW+L  +++ I  S++
Sbjct: 129 CNSMVKSWILNVVNKEIYDSIL 150


>emb|CAN67322.1| hypothetical protein VITISV_004158 [Vitis vinifera]
          Length = 1171

 Score =  100 bits (250), Expect(2) = 6e-35
 Identities = 67/210 (31%), Positives = 104/210 (49%), Gaps = 11/210 (5%)
 Frame = +2

Query: 986  LEQQLVDLHQGQLSVSEFYTKLKTLWDSLDDLYHLITCTCEKCTCDVTGRVQKIQQEQRV 1165
            +++++    Q QLS+S +YTKLK+LWD L                D +   Q  Q +QR+
Sbjct: 135  IQREIAYHRQEQLSISVYYTKLKSLWDELASYN------------DASSGAQ--QDQQRL 180

Query: 1166 LQFLMKFNDNFSTVRGNILMMTPLLNVTQAYRLVAQEESHK---EVYQQANHNEIMAFVA 1336
            +QFLM  N ++S +RG IL+M PL +V QAY  V QEE  +     +  A  N  +A   
Sbjct: 181  MQFLMGLNKSYSAIRGQILLMNPLPSVRQAYSSVCQEEKQRLLSATHTAAESNSSLAMAV 240

Query: 1337 DKRRFFDNQSGSKFQPNLSSFQSSNTF-QKNQSGFTRKPANTYDCTHCKMNGHSIERCFR 1513
               +  +N  G     N  S +S   +  K +SG +R       CT+C    H +E+C++
Sbjct: 241  RSNQMKNNSVG-----NARSDRSDRLYSDKRRSGSSR---GRPQCTYCGEMRHFVEKCYQ 292

Query: 1514 IHGFPP-------GFKSNRYRKVAALSQHS 1582
            +HG+PP       G   NR++  +  +Q S
Sbjct: 293  LHGYPPRHPKARTGSNFNRHKNASVANQVS 322



 Score = 75.1 bits (183), Expect(2) = 6e-35
 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = +1

Query: 625 SNQTNQDPSSLYYIHPSNSCTSQLVSVKFNGEGFNNWKRSMMFSLSAKNKLGFVNGTISI 804
           S+ +  D S+ Y+ H S+     L+S   NG+ ++ W+++M  +L+AKNKLGFVNGTI  
Sbjct: 31  SDASKSDLSNPYFTHHSDHPGLVLISKPLNGDNYSAWRKAMTLALNAKNKLGFVNGTIKA 90

Query: 805 P--DATSVEY*AWQRYNDLVTSWLLFNLDENIARSVI 909
           P  +    +Y  W R ND+V SW++  L+  I+  VI
Sbjct: 91  PLEETHPDDYATWSRCNDMVHSWIVNTLNPEISDFVI 127