BLASTX nr result

ID: Cnidium21_contig00014310 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014310
         (642 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520493.1| Transcription elongation factor B polypeptid...   181   8e-44
ref|XP_004145280.1| PREDICTED: transcription elongation factor B...   180   2e-43
ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|2...   180   2e-43
ref|XP_002282124.1| PREDICTED: transcription elongation factor B...   179   3e-43
ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycin...   176   3e-42

>ref|XP_002520493.1| Transcription elongation factor B polypeptide, putative [Ricinus
           communis] gi|223540335|gb|EEF41906.1| Transcription
           elongation factor B polypeptide, putative [Ricinus
           communis]
          Length = 98

 Score =  181 bits (460), Expect = 8e-44
 Identities = 89/98 (90%), Positives = 95/98 (96%)
 Frame = +1

Query: 124 MKKEDTVKLISSEGFEFVIDKKAAMVSQTIRNMLTSPGSFAETEHRQVTFPEISTTILEK 303
           M+KEDTVKLIS+EGFEFVIDK+AAMVSQTIRNMLTSPGSFAET+H +VTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKEAAMVSQTIRNMLTSPGSFAETQHGEVTFPEISTTILEK 60

Query: 304 ICQYFHWSLQYASGKETEFYIEPELTLELMMAANYLHT 417
           ICQYF+WSLQYA GKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQYAKGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_004145280.1| PREDICTED: transcription elongation factor B polypeptide 1-like
           [Cucumis sativus] gi|449474021|ref|XP_004154051.1|
           PREDICTED: transcription elongation factor B polypeptide
           1-like [Cucumis sativus]
           gi|449508510|ref|XP_004163332.1| PREDICTED:
           transcription elongation factor B polypeptide 1-like
           [Cucumis sativus]
          Length = 98

 Score =  180 bits (457), Expect = 2e-43
 Identities = 88/98 (89%), Positives = 95/98 (96%)
 Frame = +1

Query: 124 MKKEDTVKLISSEGFEFVIDKKAAMVSQTIRNMLTSPGSFAETEHRQVTFPEISTTILEK 303
           MKKEDTVKLIS+EGFEFVI K AAMVSQTIRNMLTSPG+FAE++HR+VTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISAEGFEFVIHKDAAMVSQTIRNMLTSPGNFAESQHREVTFPEISTTILEK 60

Query: 304 ICQYFHWSLQYASGKETEFYIEPELTLELMMAANYLHT 417
           ICQYFHW+LQ+ASGKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFHWNLQFASGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_002314149.1| predicted protein [Populus trichocarpa] gi|222850557|gb|EEE88104.1|
           predicted protein [Populus trichocarpa]
          Length = 98

 Score =  180 bits (457), Expect = 2e-43
 Identities = 89/98 (90%), Positives = 95/98 (96%)
 Frame = +1

Query: 124 MKKEDTVKLISSEGFEFVIDKKAAMVSQTIRNMLTSPGSFAETEHRQVTFPEISTTILEK 303
           M+KEDTVKLIS+EGFEFVI K+AAMVSQTIRNMLTSPGSFAETEH +VTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIHKEAAMVSQTIRNMLTSPGSFAETEHGEVTFPEISTTILEK 60

Query: 304 ICQYFHWSLQYASGKETEFYIEPELTLELMMAANYLHT 417
           ICQYF+WSLQYA+GKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQYANGKETEFPIEPELTLELMMAANYLHT 98


>ref|XP_002282124.1| PREDICTED: transcription elongation factor B polypeptide 1 [Vitis
           vinifera]
          Length = 98

 Score =  179 bits (455), Expect = 3e-43
 Identities = 88/98 (89%), Positives = 95/98 (96%)
 Frame = +1

Query: 124 MKKEDTVKLISSEGFEFVIDKKAAMVSQTIRNMLTSPGSFAETEHRQVTFPEISTTILEK 303
           M+KEDTVKLIS+EGFEFVIDK+AAMVSQTIRNMLTSPGSFAE EH +VTFPEISTTILEK
Sbjct: 1   MRKEDTVKLISAEGFEFVIDKRAAMVSQTIRNMLTSPGSFAEREHGEVTFPEISTTILEK 60

Query: 304 ICQYFHWSLQYASGKETEFYIEPELTLELMMAANYLHT 417
           ICQYF+WSLQ+ASGK+TEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWSLQFASGKDTEFPIEPELTLELMMAANYLHT 98


>ref|NP_001236759.1| uncharacterized protein LOC100500097 [Glycine max]
           gi|255629123|gb|ACU14906.1| unknown [Glycine max]
          Length = 98

 Score =  176 bits (446), Expect = 3e-42
 Identities = 86/98 (87%), Positives = 93/98 (94%)
 Frame = +1

Query: 124 MKKEDTVKLISSEGFEFVIDKKAAMVSQTIRNMLTSPGSFAETEHRQVTFPEISTTILEK 303
           MKKEDTVKLISSEGFEFV+DK+AA+VSQTI NMLTSPGSFAE +H +VTFPEISTTILEK
Sbjct: 1   MKKEDTVKLISSEGFEFVVDKEAAIVSQTIHNMLTSPGSFAERQHGEVTFPEISTTILEK 60

Query: 304 ICQYFHWSLQYASGKETEFYIEPELTLELMMAANYLHT 417
           ICQYF+W LQ+ASGKETEF IEPELTLELMMAANYLHT
Sbjct: 61  ICQYFYWHLQFASGKETEFSIEPELTLELMMAANYLHT 98


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