BLASTX nr result
ID: Cnidium21_contig00014300
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00014300
(1783 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD20831.2| sigma factor [Spinacia oleracea] 483 e-134
emb|CBI40014.3| unnamed protein product [Vitis vinifera] 479 e-132
ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-... 479 e-132
ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-... 478 e-132
ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative ... 476 e-132
>emb|CAD20831.2| sigma factor [Spinacia oleracea]
Length = 575
Score = 483 bits (1244), Expect = e-134
Identities = 243/317 (76%), Positives = 276/317 (87%)
Frame = -2
Query: 975 QEIDHSDPLRYLRQTTSSSRLLTAAEEQELSEGIQVLVRLEKIYKELSQRYGGEPSFIQW 796
QE+D+SDPLRYLR T+SSRLLT++EE ELS GIQ L++LEK++ EL R+G PSF+QW
Sbjct: 257 QEVDYSDPLRYLRGATNSSRLLTSSEETELSAGIQDLLKLEKLHDELKVRFGKSPSFVQW 316
Query: 795 AAAAGVDQITLRRQINYGTFCKDKMIKSNVRLVISIAKNYLKAGMNLQDLVQEGCRGLVR 616
AAAAG+DQ TLRR++N+GTFCKDKMIKSNVRLVISIAKNY +GMNLQDLVQEGCRGLVR
Sbjct: 317 AAAAGIDQRTLRRRLNHGTFCKDKMIKSNVRLVISIAKNYQGSGMNLQDLVQEGCRGLVR 376
Query: 615 GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPLYMVDATYRVKEARRNLYNEN 436
GAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLP +MV+ATYRVKEAR+ L +EN
Sbjct: 377 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLLSEN 436
Query: 435 GRQASNEELAEATGLSMVRLSNVLLAPKAPRSLDQKIGFDLNYKPSEVTADPEAETSEEL 256
G+Q +NEE+AEATGLSM RL+ VL+ PKAPRSLDQKIGF++N KPSEV ADPEAET+E+L
Sbjct: 437 GKQPNNEEVAEATGLSMKRLTAVLMTPKAPRSLDQKIGFNMNLKPSEVIADPEAETAEDL 496
Query: 255 LIKEFMRQDLNNVLDTLKQREKQVVRWRFGLDDGRMKTLQEIGELMGVSRERIRQIELCA 76
L K+FMRQDL VLDTL REKQV+RWRFGL+DGRMKTLQEIGELMGVSRERIRQIE A
Sbjct: 497 LTKQFMRQDLEKVLDTLSSREKQVIRWRFGLEDGRMKTLQEIGELMGVSRERIRQIESSA 556
Query: 75 FXXXXXXXXXXXLQQYI 25
F LQQY+
Sbjct: 557 FRKLQNKKKTINLQQYM 573
>emb|CBI40014.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 479 bits (1232), Expect = e-132
Identities = 241/318 (75%), Positives = 275/318 (86%)
Frame = -2
Query: 975 QEIDHSDPLRYLRQTTSSSRLLTAAEEQELSEGIQVLVRLEKIYKELSQRYGGEPSFIQW 796
QE+D+SDPLRYLR TTS+SRLLTA EE ELSEGIQ L++LEK+ ++L +R+G +P+F QW
Sbjct: 257 QEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQW 316
Query: 795 AAAAGVDQITLRRQINYGTFCKDKMIKSNVRLVISIAKNYLKAGMNLQDLVQEGCRGLVR 616
AAAAGVDQ TLRR+ NYG CKDKMIKSN+RLVISIAKNY AGMN+QDLVQEGCRGLVR
Sbjct: 317 AAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVR 376
Query: 615 GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPLYMVDATYRVKEARRNLYNEN 436
GAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLP +MV+ATYRVKEAR+ LY+EN
Sbjct: 377 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 436
Query: 435 GRQASNEELAEATGLSMVRLSNVLLAPKAPRSLDQKIGFDLNYKPSEVTADPEAETSEEL 256
GR +NEE+AEATGLSM RL+ VLL PKAPRSLDQKIG + N KPSEV ADP+AET+EEL
Sbjct: 437 GRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEEL 496
Query: 255 LIKEFMRQDLNNVLDTLKQREKQVVRWRFGLDDGRMKTLQEIGELMGVSRERIRQIELCA 76
LIK+FMR+DL VL++L REKQV+RWR+GL+DGR KTLQEIGELMGVSRERIRQIE CA
Sbjct: 497 LIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCA 556
Query: 75 FXXXXXXXXXXXLQQYII 22
F LQQY++
Sbjct: 557 FRKLKNKRRTKHLQQYLV 574
Score = 65.9 bits (159), Expect(2) = 4e-14
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = -1
Query: 1741 STSNAVLDLEKLHLASLEVYSNSAATEKPWTYISDMDPPS----EATLPMENLLTSEXXX 1574
+++ AVLD+EKL L SLE +SNS A +PWTYI + PP+ EATL E LLTSE
Sbjct: 48 TSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAV 107
Query: 1573 XXXXXXXXXXXXXXXXXXXXXXAMMVSNKNSTKSDIKPTA 1454
A +V NS KS+ KP +
Sbjct: 108 IAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPAS 147
Score = 40.0 bits (92), Expect(2) = 4e-14
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = -2
Query: 1338 SERTQLTQQRETVEMGVLGVSQIAHSECRSDVDEPTVXXXXXXXXXLSKSIAVRSSRQPE 1159
+ER + E G++ + + SD EPT+ SKSI VRS+RQ E
Sbjct: 165 TERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVE 224
Query: 1158 RKARRAR 1138
RKARRAR
Sbjct: 225 RKARRAR 231
>ref|XP_002273602.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 578
Score = 479 bits (1232), Expect = e-132
Identities = 241/318 (75%), Positives = 275/318 (86%)
Frame = -2
Query: 975 QEIDHSDPLRYLRQTTSSSRLLTAAEEQELSEGIQVLVRLEKIYKELSQRYGGEPSFIQW 796
QE+D+SDPLRYLR TTS+SRLLTA EE ELSEGIQ L++LEK+ ++L +R+G +P+F QW
Sbjct: 260 QEVDYSDPLRYLRGTTSTSRLLTATEELELSEGIQDLLKLEKLQEDLEERFGVKPTFAQW 319
Query: 795 AAAAGVDQITLRRQINYGTFCKDKMIKSNVRLVISIAKNYLKAGMNLQDLVQEGCRGLVR 616
AAAAGVDQ TLRR+ NYG CKDKMIKSN+RLVISIAKNY AGMN+QDLVQEGCRGLVR
Sbjct: 320 AAAAGVDQKTLRRRTNYGIRCKDKMIKSNIRLVISIAKNYQGAGMNIQDLVQEGCRGLVR 379
Query: 615 GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPLYMVDATYRVKEARRNLYNEN 436
GAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLP +MV+ATYRVKEAR+ LY+EN
Sbjct: 380 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 439
Query: 435 GRQASNEELAEATGLSMVRLSNVLLAPKAPRSLDQKIGFDLNYKPSEVTADPEAETSEEL 256
GR +NEE+AEATGLSM RL+ VLL PKAPRSLDQKIG + N KPSEV ADP+AET+EEL
Sbjct: 440 GRHPNNEEVAEATGLSMKRLNAVLLTPKAPRSLDQKIGINQNLKPSEVIADPDAETAEEL 499
Query: 255 LIKEFMRQDLNNVLDTLKQREKQVVRWRFGLDDGRMKTLQEIGELMGVSRERIRQIELCA 76
LIK+FMR+DL VL++L REKQV+RWR+GL+DGR KTLQEIGELMGVSRERIRQIE CA
Sbjct: 500 LIKQFMREDLEKVLNSLNPREKQVIRWRYGLEDGRTKTLQEIGELMGVSRERIRQIESCA 559
Query: 75 FXXXXXXXXXXXLQQYII 22
F LQQY++
Sbjct: 560 FRKLKNKRRTKHLQQYLV 577
Score = 65.9 bits (159), Expect(2) = 4e-14
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Frame = -1
Query: 1741 STSNAVLDLEKLHLASLEVYSNSAATEKPWTYISDMDPPS----EATLPMENLLTSEXXX 1574
+++ AVLD+EKL L SLE +SNS A +PWTYI + PP+ EATL E LLTSE
Sbjct: 51 TSTTAVLDIEKLRLPSLESHSNSVAAHRPWTYIGVVGPPTEANFEATLARETLLTSEEAV 110
Query: 1573 XXXXXXXXXXXXXXXXXXXXXXAMMVSNKNSTKSDIKPTA 1454
A +V NS KS+ KP +
Sbjct: 111 IAAAAAEAVALAKAAVKVAKDAARLVGKNNSAKSETKPAS 150
Score = 40.0 bits (92), Expect(2) = 4e-14
Identities = 26/67 (38%), Positives = 34/67 (50%)
Frame = -2
Query: 1338 SERTQLTQQRETVEMGVLGVSQIAHSECRSDVDEPTVXXXXXXXXXLSKSIAVRSSRQPE 1159
+ER + E G++ + + SD EPT+ SKSI VRS+RQ E
Sbjct: 168 TERIGILGDSVGAETGMVDYNSLQDVTEDSDDLEPTLEELELLEAEFSKSIVVRSNRQVE 227
Query: 1158 RKARRAR 1138
RKARRAR
Sbjct: 228 RKARRAR 234
>ref|XP_004145011.1| PREDICTED: RNA polymerase sigma factor sigB-like [Cucumis sativus]
gi|449473951|ref|XP_004154029.1| PREDICTED: RNA
polymerase sigma factor sigB-like [Cucumis sativus]
Length = 580
Score = 478 bits (1229), Expect = e-132
Identities = 236/318 (74%), Positives = 275/318 (86%)
Frame = -2
Query: 975 QEIDHSDPLRYLRQTTSSSRLLTAAEEQELSEGIQVLVRLEKIYKELSQRYGGEPSFIQW 796
QE+D+SDPLRYLR TT++SRLLTA EE ELSEGIQ L++LE++ +EL +RYG EP+F QW
Sbjct: 262 QEVDYSDPLRYLRATTNTSRLLTATEELELSEGIQDLLKLERLQEELGERYGNEPTFAQW 321
Query: 795 AAAAGVDQITLRRQINYGTFCKDKMIKSNVRLVISIAKNYLKAGMNLQDLVQEGCRGLVR 616
AAAAGV+Q TLR+++NYGT CKDKMIKSN+RLVISIAKNY AGMNLQDLVQEGCRGLVR
Sbjct: 322 AAAAGVNQRTLRKRLNYGTLCKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 381
Query: 615 GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPLYMVDATYRVKEARRNLYNEN 436
GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLP +MV+ATYRVKEAR+ L +EN
Sbjct: 382 GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPFHMVEATYRVKEARKQLLHEN 441
Query: 435 GRQASNEELAEATGLSMVRLSNVLLAPKAPRSLDQKIGFDLNYKPSEVTADPEAETSEEL 256
GR ++E+AEA GLSM RL+ VL+ PKAPRSL+QKIG + N KPSEV +DPEAET E++
Sbjct: 442 GRHPDDKEIAEAAGLSMKRLAAVLMTPKAPRSLEQKIGINQNLKPSEVISDPEAETCEDM 501
Query: 255 LIKEFMRQDLNNVLDTLKQREKQVVRWRFGLDDGRMKTLQEIGELMGVSRERIRQIELCA 76
LIK+FM+QDL VLD+L REKQV+RWRFG++DGRMKTLQEIGE+MGVSRERIRQIE CA
Sbjct: 502 LIKQFMKQDLEKVLDSLNPREKQVIRWRFGMEDGRMKTLQEIGEIMGVSRERIRQIESCA 561
Query: 75 FXXXXXXXXXXXLQQYII 22
F LQQY++
Sbjct: 562 FRKLKNKKRTKHLQQYVM 579
>ref|XP_002523972.1| RNA polymerase sigma factor rpoD1, putative [Ricinus communis]
gi|223536699|gb|EEF38340.1| RNA polymerase sigma factor
rpoD1, putative [Ricinus communis]
Length = 569
Score = 476 bits (1226), Expect = e-132
Identities = 240/318 (75%), Positives = 276/318 (86%)
Frame = -2
Query: 975 QEIDHSDPLRYLRQTTSSSRLLTAAEEQELSEGIQVLVRLEKIYKELSQRYGGEPSFIQW 796
QE+D+SDPLRYLR TTS+SRLLTA+EE ELS IQ L++LE++ +EL++RYGG+P+F QW
Sbjct: 251 QEVDYSDPLRYLRGTTSTSRLLTASEELELSAAIQDLLKLERLQEELAERYGGQPTFAQW 310
Query: 795 AAAAGVDQITLRRQINYGTFCKDKMIKSNVRLVISIAKNYLKAGMNLQDLVQEGCRGLVR 616
AAAAGVDQ TLR++IN+GT CKDKMIKSN+RLVISIAKNY AGMNLQDLVQEGCRGLVR
Sbjct: 311 AAAAGVDQRTLRKRINHGTICKDKMIKSNIRLVISIAKNYQGAGMNLQDLVQEGCRGLVR 370
Query: 615 GAEKFDASKGFKFSTYAHWWIKQAVRKFLSDQSRTIRLPLYMVDATYRVKEARRNLYNEN 436
GAEKFDASKGFKFSTYAHWWIKQAVRK LSDQSRTIRLP +MV+ATYRVKEAR+ LY+EN
Sbjct: 371 GAEKFDASKGFKFSTYAHWWIKQAVRKSLSDQSRTIRLPFHMVEATYRVKEARKQLYSEN 430
Query: 435 GRQASNEELAEATGLSMVRLSNVLLAPKAPRSLDQKIGFDLNYKPSEVTADPEAETSEEL 256
GR +EE+AEA GLSM RLS VLL PKAPRSLDQKIG +++ KPSEV ADPEAET+EEL
Sbjct: 431 GRHPDDEEVAEAAGLSMKRLSAVLLTPKAPRSLDQKIGMNMDLKPSEVIADPEAETAEEL 490
Query: 255 LIKEFMRQDLNNVLDTLKQREKQVVRWRFGLDDGRMKTLQEIGELMGVSRERIRQIELCA 76
L+K+FM+QDL VL+TL RE QVVRWRFGL+DGRMKTLQEIGE+MGVSRERIRQIE A
Sbjct: 491 LMKQFMKQDLEKVLNTLNPRETQVVRWRFGLEDGRMKTLQEIGEIMGVSRERIRQIESSA 550
Query: 75 FXXXXXXXXXXXLQQYII 22
F L+QY++
Sbjct: 551 FRKLKNKKRTKQLKQYLL 568