BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014285
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-...    86   1e-25
ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arab...    86   4e-23
ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-...    86   5e-23
ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana] gi...    86   9e-23
ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana] gi...    86   9e-23

>ref|XP_002278273.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit [Vitis
           vinifera] gi|297738589|emb|CBI27834.3| unnamed protein
           product [Vitis vinifera]
          Length = 622

 Score = 85.9 bits (211), Expect(2) = 1e-25
 Identities = 39/51 (76%), Positives = 44/51 (86%)
 Frame = -2

Query: 259 TLSQIKDEGLGRSDKPERVTMKKYITVIKADNFCYTACPLMIGDKQCNKKV 107
           T+SQIKDEGLGRSDKP+ VT+K  I+ IK D FCY ACPLMIGD+QCNKKV
Sbjct: 446 TVSQIKDEGLGRSDKPDWVTVKATISFIKTDTFCYAACPLMIGDRQCNKKV 496



 Score = 55.8 bits (133), Expect(2) = 1e-25
 Identities = 26/35 (74%), Positives = 29/35 (82%)
 Frame = -3

Query: 366 EAINLRQWFHRGGKDLASQSISRDIMPGVPKNEIR 262
           EA NLR+WF RGGK+ ASQSISRDIMP   +NEIR
Sbjct: 410 EACNLREWFDRGGKNAASQSISRDIMPAGSRNEIR 444


>ref|XP_002883738.1| hypothetical protein ARALYDRAFT_899421 [Arabidopsis lyrata subsp.
           lyrata] gi|297329578|gb|EFH59997.1| hypothetical protein
           ARALYDRAFT_899421 [Arabidopsis lyrata subsp. lyrata]
          Length = 640

 Score = 85.9 bits (211), Expect(2) = 4e-23
 Identities = 38/51 (74%), Positives = 46/51 (90%)
 Frame = -2

Query: 259 TLSQIKDEGLGRSDKPERVTMKKYITVIKADNFCYTACPLMIGDKQCNKKV 107
           ++SQIK+EGLGRSDKP+ +T+K  I+ IK D+FCYTACPLMIGDKQCNKKV
Sbjct: 466 SVSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKV 516



 Score = 47.0 bits (110), Expect(2) = 4e-23
 Identities = 25/36 (69%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = -3

Query: 366 EAINLRQWFHRGGKDLASQSISRDIMP-GVPKNEIR 262
           EA  LR WF  GGKD AS SISRD MP GV +NEIR
Sbjct: 429 EAHKLRTWFDHGGKDTASFSISRDTMPGGVSRNEIR 464


>ref|XP_003546476.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit-like
           [Glycine max]
          Length = 637

 Score = 85.5 bits (210), Expect(2) = 5e-23
 Identities = 38/51 (74%), Positives = 44/51 (86%)
 Frame = -2

Query: 259 TLSQIKDEGLGRSDKPERVTMKKYITVIKADNFCYTACPLMIGDKQCNKKV 107
           T+SQIKDEGLGRSDKP+ +T++  I  IK D FCYTACPLMIGD+QCNKKV
Sbjct: 459 TVSQIKDEGLGRSDKPDWITVRAAILFIKTDTFCYTACPLMIGDRQCNKKV 509



 Score = 47.0 bits (110), Expect(2) = 5e-23
 Identities = 22/35 (62%), Positives = 27/35 (77%)
 Frame = -3

Query: 366 EAINLRQWFHRGGKDLASQSISRDIMPGVPKNEIR 262
           EA +LR+WF   GKD AS SIS+DI+PG  KNE+R
Sbjct: 423 EAHSLREWFELVGKDSASLSISKDIIPGALKNEVR 457


>ref|NP_178690.1| replication factor A1 [Arabidopsis thaliana]
           gi|4584356|gb|AAD25150.1| putative replication protein
           A1 [Arabidopsis thaliana] gi|26452416|dbj|BAC43293.1|
           putative replication protein A1 [Arabidopsis thaliana]
           gi|29029004|gb|AAO64881.1| At2g06510 [Arabidopsis
           thaliana] gi|330250916|gb|AEC06010.1| replication factor
           A1 [Arabidopsis thaliana]
          Length = 640

 Score = 85.5 bits (210), Expect(2) = 9e-23
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = -2

Query: 256 LSQIKDEGLGRSDKPERVTMKKYITVIKADNFCYTACPLMIGDKQCNKKV 107
           +SQIK+EGLGRSDKP+ +T+K  I+ IK D+FCYTACPLMIGDKQCNKKV
Sbjct: 467 VSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKV 516



 Score = 46.2 bits (108), Expect(2) = 9e-23
 Identities = 25/36 (69%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = -3

Query: 366 EAINLRQWFHRGGKDLASQSISRDIMP-GVPKNEIR 262
           EA  LR WF  GGKD AS SISRD MP GV +NEIR
Sbjct: 429 EAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIR 464


>ref|NP_973433.1| replication factor A1 [Arabidopsis thaliana]
           gi|330250915|gb|AEC06009.1| replication factor A1
           [Arabidopsis thaliana]
          Length = 617

 Score = 85.5 bits (210), Expect(2) = 9e-23
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = -2

Query: 256 LSQIKDEGLGRSDKPERVTMKKYITVIKADNFCYTACPLMIGDKQCNKKV 107
           +SQIK+EGLGRSDKP+ +T+K  I+ IK D+FCYTACPLMIGDKQCNKKV
Sbjct: 444 VSQIKEEGLGRSDKPDWITVKATISFIKTDSFCYTACPLMIGDKQCNKKV 493



 Score = 46.2 bits (108), Expect(2) = 9e-23
 Identities = 25/36 (69%), Positives = 26/36 (72%), Gaps = 1/36 (2%)
 Frame = -3

Query: 366 EAINLRQWFHRGGKDLASQSISRDIMP-GVPKNEIR 262
           EA  LR WF  GGKD AS SISRD MP GV +NEIR
Sbjct: 406 EAHKLRTWFDYGGKDTASFSISRDTMPGGVSRNEIR 441