BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014272
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD89691.1| RNA polymerase II, second largest subunit [Escal...   211   4e-53
emb|CAD91515.1| RNA polymerase II second largest subunit [Hedera...   211   4e-53
emb|CAD92660.1| RNA polymerase II [Anthriscus sylvestris]             211   4e-53
emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]       211   4e-53
ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II su...   210   8e-53

>emb|CAD89691.1| RNA polymerase II, second largest subunit [Escallonia sp. Oxelman
           2340]
          Length = 508

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/103 (97%), Positives = 102/103 (99%)
 Frame = +2

Query: 2   TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVSNFQFRMDTLAYVL 181
           TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV+NFQFRMDTLAYVL
Sbjct: 121 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 180

Query: 182 YYPQKPLVTTRVMEHLNFRQLPAGINAIVAIACYSGYNQEDSV 310
           YYPQKPLVTTR MEHL+FRQLPAGINAIVAIACYSGYNQEDSV
Sbjct: 181 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 223


>emb|CAD91515.1| RNA polymerase II second largest subunit [Hedera helix]
          Length = 541

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/103 (97%), Positives = 102/103 (99%)
 Frame = +2

Query: 2   TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVSNFQFRMDTLAYVL 181
           TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV+NFQFRMDTLAYVL
Sbjct: 184 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 243

Query: 182 YYPQKPLVTTRVMEHLNFRQLPAGINAIVAIACYSGYNQEDSV 310
           YYPQKPLVTTR MEHL+FRQLPAGINAIVAIACYSGYNQEDSV
Sbjct: 244 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 286


>emb|CAD92660.1| RNA polymerase II [Anthriscus sylvestris]
          Length = 329

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/103 (97%), Positives = 102/103 (99%)
 Frame = +2

Query: 2   TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVSNFQFRMDTLAYVL 181
           TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV+NFQFRMDTLAYVL
Sbjct: 184 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 243

Query: 182 YYPQKPLVTTRVMEHLNFRQLPAGINAIVAIACYSGYNQEDSV 310
           YYPQKPLVTTR MEHL+FRQLPAGINAIVAIACYSGYNQEDSV
Sbjct: 244 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 286


>emb|CAD92460.1| RNA polymerase II [Escallonia sp. Oxelman 2340]
          Length = 543

 Score =  211 bits (538), Expect = 4e-53
 Identities = 100/103 (97%), Positives = 102/103 (99%)
 Frame = +2

Query: 2   TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVSNFQFRMDTLAYVL 181
           TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV+NFQFRMDTLAYVL
Sbjct: 178 TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNFQFRMDTLAYVL 237

Query: 182 YYPQKPLVTTRVMEHLNFRQLPAGINAIVAIACYSGYNQEDSV 310
           YYPQKPLVTTR MEHL+FRQLPAGINAIVAIACYSGYNQEDSV
Sbjct: 238 YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 280


>ref|XP_004134705.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus] gi|449479313|ref|XP_004155566.1| PREDICTED:
            DNA-directed RNA polymerase II subunit RPB2-like [Cucumis
            sativus]
          Length = 1199

 Score =  210 bits (535), Expect = 8e-53
 Identities = 99/103 (96%), Positives = 102/103 (99%)
 Frame = +2

Query: 2    TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVSNFQFRMDTLAYVL 181
            TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYV+N+QFRMDTLAYVL
Sbjct: 707  TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLAYVL 766

Query: 182  YYPQKPLVTTRVMEHLNFRQLPAGINAIVAIACYSGYNQEDSV 310
            YYPQKPLVTTR MEHL+FRQLPAGINAIVAIACYSGYNQEDSV
Sbjct: 767  YYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSV 809