BLASTX nr result

ID: Cnidium21_contig00014267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014267
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892205.1| predicted protein [Arabidopsis lyrata subsp....   346   6e-93
ref|XP_003556363.1| PREDICTED: uncharacterized protein LOC100796...   345   1e-92
gb|AAB70448.1| Strong similarity to Arabidopsis REV3C (gb|X62461...   343   5e-92
emb|CAA44318.1| H1flk [Arabidopsis thaliana]                          343   5e-92
ref|NP_171924.2| protein H1flk [Arabidopsis thaliana] gi|1107422...   343   5e-92

>ref|XP_002892205.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297338047|gb|EFH68464.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 479

 Score =  346 bits (887), Expect = 6e-93
 Identities = 179/279 (64%), Positives = 205/279 (73%), Gaps = 1/279 (0%)
 Frame = +2

Query: 2    SFWSGAGTNAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTSTDAASSLLVTAL 181
            SFWS A  +AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+STDAASSLLVTAL
Sbjct: 201  SFWSEAEADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTAL 260

Query: 182  NEGRDVIMDGTFSWEPFVQQTIVMARNVHKHRYRMGVGYKVQDDGTVIEKYWEQIDENEE 361
            N+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMGVGYKV +DGT+ EKYWE+ +E +E
Sbjct: 261  NDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGVGYKVSEDGTITEKYWEEEEETKE 320

Query: 362  -GYEKLGKRRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXXNSQLKSHKRFANAFPKY 538
             G +K+ K  PYRIELVGVVCDAYL                    QL SHKRFANAFPKY
Sbjct: 321  NGKQKIFK--PYRIELVGVVCDAYLAVARGIRRALIVKRAVRVKPQLNSHKRFANAFPKY 378

Query: 539  CPLVDLARLYCTNGVGCPPTLIGYKDGASKLLVDPDEIRCLKMVSKLNDEAESVXXXXXX 718
            C LVD ARLYCTN VG PP LI +KDG SKLLVDP++  CLK VS LN +AES+      
Sbjct: 379  CELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDFECLKRVSSLNPDAESIYELYPD 438

Query: 719  XXXXXXIVGTGSQVWKDIVLLPDRHKIQQELLVAIRKIE 835
                   +     VW D+VL+P R K+Q+EL  A+R+IE
Sbjct: 439  PSQ----LSKPGSVWNDVVLVPSRPKVQKELSDAVRRIE 473


>ref|XP_003556363.1| PREDICTED: uncharacterized protein LOC100796923 [Glycine max]
          Length = 523

 Score =  345 bits (885), Expect = 1e-92
 Identities = 182/284 (64%), Positives = 206/284 (72%), Gaps = 6/284 (2%)
 Frame = +2

Query: 2    SFWSGAGTNAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTSTDAASSLLVTAL 181
            SFWSGA +NAVVVEADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+STDAASSLLVTAL
Sbjct: 238  SFWSGAASNAVVVEADAFKESDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTAL 297

Query: 182  NEGRDVIMDGTFSWEPFVQQTIVMARNVHKHRYRMGVGYKVQDDGTVIEKYWEQIDENEE 361
            NEGRDVIMDGT SWEPFV+QTI MARNVHKHRYRMGVGYKV +DGT+ E YWEQ+++ EE
Sbjct: 298  NEGRDVIMDGTLSWEPFVEQTIAMARNVHKHRYRMGVGYKVAEDGTITENYWEQVNDAEE 357

Query: 362  GYE------KLGKRRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXXNSQLKSHKRFAN 523
                     +   ++PYRIELVGVVCD YL                  NSQLKSHKRFAN
Sbjct: 358  HQSEEISNGEAHTQKPYRIELVGVVCDGYLAVVRGIRRAIMTGRAVRVNSQLKSHKRFAN 417

Query: 524  AFPKYCPLVDLARLYCTNGVGCPPTLIGYKDGASKLLVDPDEIRCLKMVSKLNDEAESVX 703
            AFP+YC LVD ARLYCTN VG PP LIG KDG   LLVD +EI+CL+ +  LN  A+S+ 
Sbjct: 418  AFPRYCKLVDNARLYCTNAVGGPPKLIGRKDGDHNLLVDREEIKCLETLGSLNAGADSI- 476

Query: 704  XXXXXXXXXXXIVGTGSQVWKDIVLLPDRHKIQQELLVAIRKIE 835
                       I+  GS VW DIV+ P R   Q+EL  +I+KIE
Sbjct: 477  --YELHKEPSPIMEPGS-VWNDIVMSPSRPSDQKELKESIQKIE 517


>gb|AAB70448.1| Strong similarity to Arabidopsis REV3C (gb|X62461) [Arabidopsis
            thaliana] gi|111074216|gb|ABH04481.1| At1g04280
            [Arabidopsis thaliana]
          Length = 480

 Score =  343 bits (879), Expect = 5e-92
 Identities = 176/278 (63%), Positives = 201/278 (72%)
 Frame = +2

Query: 2    SFWSGAGTNAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTSTDAASSLLVTAL 181
            SFWS A  +AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+STDAASSLLVTAL
Sbjct: 201  SFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTAL 260

Query: 182  NEGRDVIMDGTFSWEPFVQQTIVMARNVHKHRYRMGVGYKVQDDGTVIEKYWEQIDENEE 361
            N+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMG GYKV ++GT+ EKYWE+ +E  +
Sbjct: 261  NDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTITEKYWEEEEEETK 320

Query: 362  GYEKLGKRRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXXNSQLKSHKRFANAFPKYC 541
               K    +PYRIELVGVVCDAYL                    QL SHKRFANAFPKYC
Sbjct: 321  ENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNSHKRFANAFPKYC 380

Query: 542  PLVDLARLYCTNGVGCPPTLIGYKDGASKLLVDPDEIRCLKMVSKLNDEAESVXXXXXXX 721
             LVD ARLYCTN VG PP LI +KDG SKLLVDP++I CLK VS LN +AES+       
Sbjct: 381  ELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNPDAESIYELYPDP 440

Query: 722  XXXXXIVGTGSQVWKDIVLLPDRHKIQQELLVAIRKIE 835
                  +     VW D+VL+P R K+Q+EL  AIR+IE
Sbjct: 441  SQ----LSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 474


>emb|CAA44318.1| H1flk [Arabidopsis thaliana]
          Length = 525

 Score =  343 bits (879), Expect = 5e-92
 Identities = 176/278 (63%), Positives = 201/278 (72%)
 Frame = +2

Query: 2    SFWSGAGTNAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTSTDAASSLLVTAL 181
            SFWS A  +AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+STDAASSLLVTAL
Sbjct: 246  SFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTAL 305

Query: 182  NEGRDVIMDGTFSWEPFVQQTIVMARNVHKHRYRMGVGYKVQDDGTVIEKYWEQIDENEE 361
            N+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMG GYKV ++GT+ EKYWE+ +E  +
Sbjct: 306  NDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTITEKYWEEEEEETK 365

Query: 362  GYEKLGKRRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXXNSQLKSHKRFANAFPKYC 541
               K    +PYRIELVGVVCDAYL                    QL SHKRFANAFPKYC
Sbjct: 366  ENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNSHKRFANAFPKYC 425

Query: 542  PLVDLARLYCTNGVGCPPTLIGYKDGASKLLVDPDEIRCLKMVSKLNDEAESVXXXXXXX 721
             LVD ARLYCTN VG PP LI +KDG SKLLVDP++I CLK VS LN +AES+       
Sbjct: 426  ELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNPDAESIYELYPDP 485

Query: 722  XXXXXIVGTGSQVWKDIVLLPDRHKIQQELLVAIRKIE 835
                  +     VW D+VL+P R K+Q+EL  AIR+IE
Sbjct: 486  SQ----LSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 519


>ref|NP_171924.2| protein H1flk [Arabidopsis thaliana] gi|110742284|dbj|BAE99067.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332189557|gb|AEE27678.1| protein H1flk [Arabidopsis
            thaliana]
          Length = 534

 Score =  343 bits (879), Expect = 5e-92
 Identities = 176/278 (63%), Positives = 201/278 (72%)
 Frame = +2

Query: 2    SFWSGAGTNAVVVEADAFKERDVIYRAISSRGHHQDMLQTAELVHQTSTDAASSLLVTAL 181
            SFWS A  +AVV+EADAFKE DVIYRA+SSRGHH DMLQTAELVHQ+STDAASSLLVTAL
Sbjct: 255  SFWSEAQADAVVIEADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTAL 314

Query: 182  NEGRDVIMDGTFSWEPFVQQTIVMARNVHKHRYRMGVGYKVQDDGTVIEKYWEQIDENEE 361
            N+GRDVIMDGT SWEPFV+Q I MARNVHK +YRMG GYKV ++GT+ EKYWE+ +E  +
Sbjct: 315  NDGRDVIMDGTLSWEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTITEKYWEEEEEETK 374

Query: 362  GYEKLGKRRPYRIELVGVVCDAYLXXXXXXXXXXXXXXXXXXNSQLKSHKRFANAFPKYC 541
               K    +PYRIELVGVVCDAYL                    QL SHKRFANAFPKYC
Sbjct: 375  ENGKQQNLKPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNSHKRFANAFPKYC 434

Query: 542  PLVDLARLYCTNGVGCPPTLIGYKDGASKLLVDPDEIRCLKMVSKLNDEAESVXXXXXXX 721
             LVD ARLYCTN VG PP LI +KDG SKLLVDP++I CLK VS LN +AES+       
Sbjct: 435  ELVDNARLYCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNPDAESIYELYPDP 494

Query: 722  XXXXXIVGTGSQVWKDIVLLPDRHKIQQELLVAIRKIE 835
                  +     VW D+VL+P R K+Q+EL  AIR+IE
Sbjct: 495  SQ----LSKPGSVWNDVVLVPSRPKVQKELSDAIRRIE 528


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