BLASTX nr result

ID: Cnidium21_contig00014232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014232
         (599 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37213.1| unknown [Medicago truncatula]                          174   8e-42
gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea b...   174   1e-41
gb|AFK41754.1| unknown [Lotus japonicus]                              172   3e-41
ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...   172   4e-41
ref|XP_003531086.1| PREDICTED: uncharacterized protein LOC100306...   170   2e-40

>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score =  174 bits (442), Expect = 8e-42
 Identities = 85/87 (97%), Positives = 86/87 (98%)
 Frame = +2

Query: 68  MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEFTAEGR 247
           MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE TAEGR
Sbjct: 1   MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 248 RVTKLDQILLNGNNIAILVPGGSPDPE 328
           R+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>gb|ADR71256.1| U6 snRNA-associated Sm-like protein LSm5 [Hevea brasiliensis]
          Length = 87

 Score =  174 bits (441), Expect = 1e-41
 Identities = 85/87 (97%), Positives = 86/87 (98%)
 Frame = +2

Query: 68  MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEFTAEGR 247
           MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE TAEGR
Sbjct: 1   MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEVTAEGR 60

Query: 248 RVTKLDQILLNGNNIAILVPGGSPDPE 328
           R+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score =  172 bits (437), Expect = 3e-41
 Identities = 84/87 (96%), Positives = 86/87 (98%)
 Frame = +2

Query: 68  MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEFTAEGR 247
           MA+NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE TAEGR
Sbjct: 1   MASNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 248 RVTKLDQILLNGNNIAILVPGGSPDPE 328
           R+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score =  172 bits (436), Expect = 4e-41
 Identities = 84/87 (96%), Positives = 85/87 (97%)
 Frame = +2

Query: 68  MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEFTAEGR 247
           MA NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE TAEGR
Sbjct: 1   MATNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 248 RVTKLDQILLNGNNIAILVPGGSPDPE 328
           R+TKLDQILLNGNNIAILVPGGSPDPE
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPDPE 87


>ref|XP_003531086.1| PREDICTED: uncharacterized protein LOC100306359 [Glycine max]
           gi|255628297|gb|ACU14493.1| unknown [Glycine max]
          Length = 87

 Score =  170 bits (430), Expect = 2e-40
 Identities = 83/87 (95%), Positives = 85/87 (97%)
 Frame = +2

Query: 68  MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEFTAEGR 247
           MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYE TAEGR
Sbjct: 1   MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR 60

Query: 248 RVTKLDQILLNGNNIAILVPGGSPDPE 328
           R+TKLDQILLNGNNIAILVPGGSP+ E
Sbjct: 61  RITKLDQILLNGNNIAILVPGGSPESE 87


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