BLASTX nr result

ID: Cnidium21_contig00014230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014230
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22472.3| unnamed protein product [Vitis vinifera]              224   1e-56
ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis...   224   1e-56
ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus ...   214   1e-53
ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|1...   213   3e-53
dbj|BAD44405.1| unnamed protein product [Arabidopsis thaliana]        207   3e-51

>emb|CBI22472.3| unnamed protein product [Vitis vinifera]
          Length = 153

 Score =  224 bits (572), Expect = 1e-56
 Identities = 99/122 (81%), Positives = 105/122 (86%)
 Frame = -3

Query: 653 GSESGWVEARTHCDHLTSLCSDLIHIPTPNTPCNRCQHPSENWLCLCCKEVLCSRFVNKH 474
           G+ESGWVEART CDHL SL SDL+HIPTP TPCNRC +PSENWLCLCCKEVLCSRFVNKH
Sbjct: 24  GAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLCSRFVNKH 83

Query: 473 MLEHSQQSKHCLALSYSDLSVWCFSCDAYLDAPVILSLRPVYETAYILKFGEAPPVPADS 294
           MLEH Q+  HCLALSYSDLS+WCFSCDAYLDA  IL L PVYETAYILKFG+APP P   
Sbjct: 84  MLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPFPTTD 143

Query: 293 RQ 288
            Q
Sbjct: 144 NQ 145


>ref|XP_002263779.1| PREDICTED: histone deacetylase 6-like [Vitis vinifera]
          Length = 154

 Score =  224 bits (572), Expect = 1e-56
 Identities = 99/122 (81%), Positives = 105/122 (86%)
 Frame = -3

Query: 653 GSESGWVEARTHCDHLTSLCSDLIHIPTPNTPCNRCQHPSENWLCLCCKEVLCSRFVNKH 474
           G+ESGWVEART CDHL SL SDL+HIPTP TPCNRC +PSENWLCLCCKEVLCSRFVNKH
Sbjct: 25  GAESGWVEARTSCDHLASLSSDLVHIPTPETPCNRCHNPSENWLCLCCKEVLCSRFVNKH 84

Query: 473 MLEHSQQSKHCLALSYSDLSVWCFSCDAYLDAPVILSLRPVYETAYILKFGEAPPVPADS 294
           MLEH Q+  HCLALSYSDLS+WCFSCDAYLDA  IL L PVYETAYILKFG+APP P   
Sbjct: 85  MLEHYQKVNHCLALSYSDLSIWCFSCDAYLDAQAILQLHPVYETAYILKFGQAPPFPTTD 144

Query: 293 RQ 288
            Q
Sbjct: 145 NQ 146


>ref|XP_002527496.1| histone deacetylase hda2, putative [Ricinus communis]
           gi|223533136|gb|EEF34894.1| histone deacetylase hda2,
           putative [Ricinus communis]
          Length = 159

 Score =  214 bits (546), Expect = 1e-53
 Identities = 96/118 (81%), Positives = 105/118 (88%)
 Frame = -3

Query: 653 GSESGWVEARTHCDHLTSLCSDLIHIPTPNTPCNRCQHPSENWLCLCCKEVLCSRFVNKH 474
           GSESGWVEA+T CDHL SL SDL HI TP+TPC+RCQHPSENWLCL CK+VLCSRFVNKH
Sbjct: 30  GSESGWVEAKTSCDHLGSLSSDLSHISTPDTPCHRCQHPSENWLCLSCKDVLCSRFVNKH 89

Query: 473 MLEHSQQSKHCLALSYSDLSVWCFSCDAYLDAPVILSLRPVYETAYILKFGEAPPVPA 300
           ML+H  Q+ HC+ALSYSDLSVWCF+CDAYLDA VI+ LRPVYETAYILKFGEAPP  A
Sbjct: 90  MLQHYHQTHHCVALSYSDLSVWCFACDAYLDAQVIMQLRPVYETAYILKFGEAPPFRA 147


>ref|XP_002313903.1| predicted protein [Populus trichocarpa] gi|118483848|gb|ABK93815.1|
           unknown [Populus trichocarpa]
           gi|222850311|gb|EEE87858.1| predicted protein [Populus
           trichocarpa]
          Length = 160

 Score =  213 bits (543), Expect = 3e-53
 Identities = 93/115 (80%), Positives = 104/115 (90%)
 Frame = -3

Query: 653 GSESGWVEARTHCDHLTSLCSDLIHIPTPNTPCNRCQHPSENWLCLCCKEVLCSRFVNKH 474
           G+ESGWVEART CDHL SL SDL HIPTP+TPCNRCQHPSENWLCL CK+VLCSRFVNKH
Sbjct: 26  GAESGWVEARTSCDHLASLSSDLAHIPTPDTPCNRCQHPSENWLCLSCKDVLCSRFVNKH 85

Query: 473 MLEHSQQSKHCLALSYSDLSVWCFSCDAYLDAPVILSLRPVYETAYILKFGEAPP 309
           ML+H  Q+ HCLALSYSDLS+WCF+CD+YLDA VI+ L+PV ETA+ILKFGEAPP
Sbjct: 86  MLQHFHQTSHCLALSYSDLSIWCFACDSYLDARVIIQLKPVSETAHILKFGEAPP 140


>dbj|BAD44405.1| unnamed protein product [Arabidopsis thaliana]
          Length = 146

 Score =  207 bits (526), Expect = 3e-51
 Identities = 88/117 (75%), Positives = 103/117 (88%)
 Frame = -3

Query: 653 GSESGWVEARTHCDHLTSLCSDLIHIPTPNTPCNRCQHPSENWLCLCCKEVLCSRFVNKH 474
           G+ SGWVEAR  CDHL +L  DL+H+PTP+TPC+RCQ+P ENWLCLCCKEVLCSRFVN+H
Sbjct: 28  GAGSGWVEARKTCDHLNTLSPDLLHLPTPDTPCSRCQNPVENWLCLCCKEVLCSRFVNRH 87

Query: 473 MLEHSQQSKHCLALSYSDLSVWCFSCDAYLDAPVILSLRPVYETAYILKFGEAPPVP 303
           ML H QQ+ HCLALSYSDLSVWCF C+AYLDA +IL LRP+++ AYILKFGEAPP+P
Sbjct: 88  MLTHHQQTGHCLALSYSDLSVWCFCCEAYLDAQIILQLRPIHQAAYILKFGEAPPLP 144


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