BLASTX nr result
ID: Cnidium21_contig00014197
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00014197
(1800 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526471.1| pentatricopeptide repeat-containing protein,... 651 0.0
ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi... 647 0.0
ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|2... 643 0.0
ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|2... 632 e-179
ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containi... 619 e-175
>ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223534146|gb|EEF35862.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 533
Score = 651 bits (1680), Expect = 0.0
Identities = 323/524 (61%), Positives = 402/524 (76%), Gaps = 5/524 (0%)
Frame = +2
Query: 71 LYPHQFHNTTNASS--SYSLQFPSGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMDYEN 244
L P H + SS SYS P + T ++ RK P ITC + VH YGT+DYE
Sbjct: 4 LQPSLNHQQASLSSTISYSRPLPWKNPHYTLHQTVNYRKLP-ITCSISKVHSYGTVDYER 62
Query: 245 KPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKELRKFRHFKLALE 424
+P +KW+ Y+RISLME PE GAA++LN+ E +GKK TKWELCRVVKELRK++ K ALE
Sbjct: 63 RPMIKWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALE 122
Query: 425 VYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKDKRIYGALLNSYV 604
VY+WMN R +RFR+S SD AIQLDL++KV+G+S AEDYFM+L D++KD+R+YGALLNSYV
Sbjct: 123 VYDWMNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYV 182
Query: 605 RAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPLDIY 784
+A+ ++KAES+I +M+ + Y +HALP+NVMMTLYMN K+YDKVD++++EMM K I LDIY
Sbjct: 183 KARMREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIY 242
Query: 785 TYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEYLRK 964
+YNIWLSS GSQGS E+ME+V+EQMKLD TINPNWTTFSTMATMYIKMGQ+EK E+ LR+
Sbjct: 243 SYNIWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRR 302
Query: 965 VEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVRVDD 1144
VE R TGRDR+PYH+L++LYG+ GNKEE R WN YK F TIPNLGYHAI+SSLVR+DD
Sbjct: 303 VESRITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDD 362
Query: 1145 IEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPTTWE 1324
IE AEKIYEEWL VKS+YDPRI NL+MGWYVR GN +KAE FF +++V GGK N +TWE
Sbjct: 363 IEGAEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEV-GGKPNSSTWE 421
Query: 1325 ILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVLFGI 1504
IL + + +KRISEA+SC +EA L +GSK WKPKP +S+ KLC++E D S VL +
Sbjct: 422 ILADGHTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTGVLEDL 481
Query: 1505 LKKLGCLNDEVYASYISITDAGTVSDELPMEKDGADD---VEEN 1627
L + G L D+ YAS I + S+EL EKD D VEEN
Sbjct: 482 LAQSGYLEDKTYASLIG---SSVPSNELSTEKDRTGDRNEVEEN 522
>ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
[Vitis vinifera]
Length = 527
Score = 647 bits (1669), Expect = 0.0
Identities = 318/503 (63%), Positives = 391/503 (77%), Gaps = 3/503 (0%)
Frame = +2
Query: 134 SGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMDYENKPPLKWSYYYKRISLMENPEKGA 313
SGF + T S+ RKH ITC + +H YGT+DYE +P +KW+ Y+RISLMENPE G+
Sbjct: 16 SGFPSFTLPRSVNYRKHS-ITCSISQIHSYGTVDYERRPLVKWNAVYRRISLMENPEMGS 74
Query: 314 ASILNQCENEGKKFTKWELCRVVKELRKFRHFKLALEVYEWMNTRADRFRISTSDTAIQL 493
AS+LNQ ENEGK+ TKWELCRVVKELRKF+ FK+ALEVYEWMN R +RFR+S+SD AIQL
Sbjct: 75 ASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSSDAAIQL 134
Query: 494 DLISKVQGISDAEDYFMKLPDSLKDKRIYGALLNSYVRAKKKKKAESMISQMKDRGYASH 673
DLI+KV G+S AEDYF +LPD+LKDKRIYGALLN+YV+AK + KAE +I +++++GYA+
Sbjct: 135 DLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATT 194
Query: 674 ALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPLDIYTYNIWLSSCGSQGSAEKMEQVFE 853
LP+NVMMTLYMN K+ DKV +++EMM K I LDIY+YNIWLSSC S E+MEQVFE
Sbjct: 195 PLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSC---ESTERMEQVFE 251
Query: 854 QMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEYLRKVEGRFTGRDRMPYHFLITLYGSS 1033
QMKL+ TINPNWTTFSTMATMYIK+GQ EK EE L+KVE R T RDRMPYH+LI+LYGS+
Sbjct: 252 QMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGST 311
Query: 1034 GNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVRVDDIEMAEKIYEEWLTVKSTYDPRIA 1213
GNK E RAWN YK FP IPNLGYHA++SSLVRV D+E AEKIYEEWL+VKS+YDPRI
Sbjct: 312 GNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIG 371
Query: 1214 NLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPTTWEILGEIYINKKRISEAVSCLQEAT 1393
NL++G YV+ G EKAE F +++ AGGK N TTWEIL E K+IS+A+SC + A
Sbjct: 372 NLLLGCYVKEGFLEKAEGFLDHMIE-AGGKPNSTTWEILAEGNTGVKKISDALSCFKRAV 430
Query: 1394 LVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVLFGILKKLGCLNDEVYASYISITDAGT 1573
L EGS WKPKP NVS L LC++E D +K+ L G+L+++GCL DE YAS +
Sbjct: 431 LAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLEDEPYASLFGLHTGSV 490
Query: 1574 VSDELPMEKD--GAD-DVEENAE 1633
+EL EKD GAD D++E+ +
Sbjct: 491 TGNELSNEKDRTGADKDIDEDED 513
>ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|222835341|gb|EEE73776.1|
predicted protein [Populus trichocarpa]
Length = 539
Score = 643 bits (1658), Expect = 0.0
Identities = 307/526 (58%), Positives = 407/526 (77%)
Frame = +2
Query: 56 LPQPRLYPHQFHNTTNASSSYSLQFPSGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMD 235
L QP L+ H+ +++ S S+S+ + S ST ++ +K P I C + VH YGT+D
Sbjct: 2 LLQPALHHHKVSLSSSISYSHSVPWKSP--KSTLHQTVNHKKLPVIICSISQVHNYGTVD 59
Query: 236 YENKPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKELRKFRHFKL 415
YE +P +KW+ Y+RISLMENPE G+ S+LN+ ENEGK+ TKWELCRVVKELRK++ ++
Sbjct: 60 YERRPMIKWNGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQ 119
Query: 416 ALEVYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKDKRIYGALLN 595
ALEVY+WM R +RFR+S SD AIQLDLI+KV+G+S AED+F+ LP++ KD+R+YGALLN
Sbjct: 120 ALEVYDWMKNRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLN 179
Query: 596 SYVRAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPL 775
+YV+ + ++KAE++ +M+D+GY +HALP+NV MTLYMN K+YDKVDL+++EM EK I L
Sbjct: 180 AYVQNRMREKAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKL 239
Query: 776 DIYTYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEY 955
DIY+YNIWLSSCGSQGSA+KMEQV+EQMK D +INPNWTTFSTMATMYIKMGQ EK E+
Sbjct: 240 DIYSYNIWLSSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDC 299
Query: 956 LRKVEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVR 1135
LR+VE R TGRDR+PYH+L++LYG+ GNKEE R WN YK FP+IPNLGYHAI+SSLVR
Sbjct: 300 LRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVR 359
Query: 1136 VDDIEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPT 1315
+DDIE AEKIYEEWL++K++YDPRIANL + YV GN ++A+ FF +++ GGK N
Sbjct: 360 LDDIEGAEKIYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLE-DGGKPNSN 418
Query: 1316 TWEILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVL 1495
TWEIL + +I+++R SEA+SCL+EA + GSK WKP P NV++ KLC++E D +K+ L
Sbjct: 419 TWEILAQGHISERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEAL 478
Query: 1496 FGILKKLGCLNDEVYASYISITDAGTVSDELPMEKDGADDVEENAE 1633
G L++ G L D+ YAS + + G DEL ++DG D +N E
Sbjct: 479 EGFLRQSGHLKDKAYASLLGMPVTG---DELSTKEDGTGDQIDNEE 521
>ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|222842965|gb|EEE80512.1|
predicted protein [Populus trichocarpa]
Length = 497
Score = 632 bits (1631), Expect = e-179
Identities = 301/496 (60%), Positives = 389/496 (78%)
Frame = +2
Query: 56 LPQPRLYPHQFHNTTNASSSYSLQFPSGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMD 235
L QP L+ H+ + +++ SYS P N T ++ +K P ITC + +H YGT+D
Sbjct: 2 LLQPSLHHHKV--SLSSTISYSHPLPWKNPNFTLHQTVNYKKLPVITCSISQIHNYGTVD 59
Query: 236 YENKPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKELRKFRHFKL 415
YE +P +KW+ Y+RISLMENPE G+ S+LNQ EN+GK+ TKWELCRVVKELRK++ ++
Sbjct: 60 YERRPMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQ 119
Query: 416 ALEVYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKDKRIYGALLN 595
ALEVY+WMN R +RF +S SD AIQLDLI+KV+G+S AED+F++LP++ KD+RIYGALLN
Sbjct: 120 ALEVYDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLN 179
Query: 596 SYVRAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPL 775
+YVR + ++KAES+I +M+ + Y +HALPYNVMMTLYMN +YDKVDL+++EM EK I L
Sbjct: 180 AYVRNRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKL 239
Query: 776 DIYTYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEY 955
DIY+YNIWLSSCG QGSA+KMEQVFEQMK DG+INPNWTTFSTMATMYIKMG+ EK E+
Sbjct: 240 DIYSYNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDC 299
Query: 956 LRKVEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVR 1135
LR+VE R TGRDR+PYH+L++LYG+ GNKEE R WN YK FP+IPNLGYHA++SSLVR
Sbjct: 300 LRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVR 359
Query: 1136 VDDIEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPT 1315
+DDIE AEKIYEEWL++K++YDPRIANL M +V GN +KAE FF +++ GGK N
Sbjct: 360 MDDIEGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLE-EGGKPNSH 418
Query: 1316 TWEILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVL 1495
+WEIL + +I+++R SEA+SCL+EA GSK WKP P NVS+ KLC++E D SK+ L
Sbjct: 419 SWEILAQGHISERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEAL 478
Query: 1496 FGILKKLGCLNDEVYA 1543
L++ G L D+ YA
Sbjct: 479 ASFLRQSGHLKDKAYA 494
>ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150-like
[Cucumis sativus] gi|449525818|ref|XP_004169913.1|
PREDICTED: pentatricopeptide repeat-containing protein
At1g02150-like [Cucumis sativus]
Length = 537
Score = 619 bits (1597), Expect = e-175
Identities = 305/535 (57%), Positives = 397/535 (74%), Gaps = 3/535 (0%)
Frame = +2
Query: 38 MLLQSSLPQPRLYPHQFHNTTNASS--SYSLQFPSGFCNSTNLSSIKSRKHPC-ITCYVP 208
MLLQ+S+ H T + S SYS +F + ++ R+ P +TC +
Sbjct: 1 MLLQTSV---------HHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSIS 51
Query: 209 LVHKYGTMDYENKPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKE 388
VH YGT+D+E +P KW+ Y+RISLMENPE G+AS+LNQ ENEGK TKWEL RVVKE
Sbjct: 52 QVHSYGTVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKE 111
Query: 389 LRKFRHFKLALEVYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKD 568
LRK++ F+ ALE+Y+WM+ R +RFR++TSD AIQLDLISKV+GI AE+YF++LP+ LKD
Sbjct: 112 LRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKD 171
Query: 569 KRIYGALLNSYVRAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVA 748
+RIYGALLN+Y + ++++KAE+++ +M+ +G+ +H LP+NVMMTLYMN K+Y+KV+ +V+
Sbjct: 172 RRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVS 231
Query: 749 EMMEKQIPLDIYTYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKM 928
EM E I LDIY+YNIWLSSCG QGS EKME+V+EQMK D TIN NWTTFSTMATMYIKM
Sbjct: 232 EMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKM 291
Query: 929 GQVEKGEEYLRKVEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGY 1108
G +EK EE LR+VE R GRDR+PYH+LI+LYGS GNKEE R WN YK FPTIPNLGY
Sbjct: 292 GLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGY 351
Query: 1109 HAIVSSLVRVDDIEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVD 1288
HAI+S+L+RV D+E AEKIYEEWLTVKSTYDPRIANL +GWYV+ GN KAE FF +V+
Sbjct: 352 HAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVE 411
Query: 1289 VAGGKRNPTTWEILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQE 1468
V GGK N +TWEIL + + + R+S+A++ +EA EGSK W+PKP NV LC++E
Sbjct: 412 V-GGKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKE 470
Query: 1469 GDEDSKDVLFGILKKLGCLNDEVYASYISITDAGTVSDELPMEKDGADDVEENAE 1633
GD SK+VL G+L++ L D+ YAS I + D ++E+ + +D + E
Sbjct: 471 GDIASKEVLVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTE 525