BLASTX nr result

ID: Cnidium21_contig00014197 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014197
         (1800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526471.1| pentatricopeptide repeat-containing protein,...   651   0.0  
ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containi...   647   0.0  
ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|2...   643   0.0  
ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|2...   632   e-179
ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containi...   619   e-175

>ref|XP_002526471.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223534146|gb|EEF35862.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  651 bits (1680), Expect = 0.0
 Identities = 323/524 (61%), Positives = 402/524 (76%), Gaps = 5/524 (0%)
 Frame = +2

Query: 71   LYPHQFHNTTNASS--SYSLQFPSGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMDYEN 244
            L P   H   + SS  SYS   P    + T   ++  RK P ITC +  VH YGT+DYE 
Sbjct: 4    LQPSLNHQQASLSSTISYSRPLPWKNPHYTLHQTVNYRKLP-ITCSISKVHSYGTVDYER 62

Query: 245  KPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKELRKFRHFKLALE 424
            +P +KW+  Y+RISLME PE GAA++LN+ E +GKK TKWELCRVVKELRK++  K ALE
Sbjct: 63   RPMIKWNSVYRRISLMEKPELGAATVLNEMEKDGKKLTKWELCRVVKELRKYKRHKQALE 122

Query: 425  VYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKDKRIYGALLNSYV 604
            VY+WMN R +RFR+S SD AIQLDL++KV+G+S AEDYFM+L D++KD+R+YGALLNSYV
Sbjct: 123  VYDWMNNREERFRLSASDAAIQLDLVAKVRGVSSAEDYFMRLSDNVKDRRVYGALLNSYV 182

Query: 605  RAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPLDIY 784
            +A+ ++KAES+I +M+ + Y +HALP+NVMMTLYMN K+YDKVD++++EMM K I LDIY
Sbjct: 183  KARMREKAESLIEKMRKKDYTTHALPFNVMMTLYMNLKEYDKVDMMISEMMAKNIRLDIY 242

Query: 785  TYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEYLRK 964
            +YNIWLSS GSQGS E+ME+V+EQMKLD TINPNWTTFSTMATMYIKMGQ+EK E+ LR+
Sbjct: 243  SYNIWLSSRGSQGSIERMEEVYEQMKLDSTINPNWTTFSTMATMYIKMGQLEKAEDCLRR 302

Query: 965  VEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVRVDD 1144
            VE R TGRDR+PYH+L++LYG+ GNKEE  R WN YK  F TIPNLGYHAI+SSLVR+DD
Sbjct: 303  VESRITGRDRIPYHYLLSLYGNVGNKEEIYRVWNIYKSIFATIPNLGYHAIISSLVRMDD 362

Query: 1145 IEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPTTWE 1324
            IE AEKIYEEWL VKS+YDPRI NL+MGWYVR GN +KAE FF  +++V GGK N +TWE
Sbjct: 363  IEGAEKIYEEWLPVKSSYDPRIGNLLMGWYVRGGNLDKAESFFDHMMEV-GGKPNSSTWE 421

Query: 1325 ILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVLFGI 1504
            IL + +  +KRISEA+SC +EA L +GSK WKPKP  +S+  KLC++E D  S  VL  +
Sbjct: 422  ILADGHTREKRISEALSCFKEAFLAQGSKSWKPKPVIISSFFKLCEEEADMASTGVLEDL 481

Query: 1505 LKKLGCLNDEVYASYISITDAGTVSDELPMEKDGADD---VEEN 1627
            L + G L D+ YAS I    +   S+EL  EKD   D   VEEN
Sbjct: 482  LAQSGYLEDKTYASLIG---SSVPSNELSTEKDRTGDRNEVEEN 522


>ref|XP_002270492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150
            [Vitis vinifera]
          Length = 527

 Score =  647 bits (1669), Expect = 0.0
 Identities = 318/503 (63%), Positives = 391/503 (77%), Gaps = 3/503 (0%)
 Frame = +2

Query: 134  SGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMDYENKPPLKWSYYYKRISLMENPEKGA 313
            SGF + T   S+  RKH  ITC +  +H YGT+DYE +P +KW+  Y+RISLMENPE G+
Sbjct: 16   SGFPSFTLPRSVNYRKHS-ITCSISQIHSYGTVDYERRPLVKWNAVYRRISLMENPEMGS 74

Query: 314  ASILNQCENEGKKFTKWELCRVVKELRKFRHFKLALEVYEWMNTRADRFRISTSDTAIQL 493
            AS+LNQ ENEGK+ TKWELCRVVKELRKF+ FK+ALEVYEWMN R +RFR+S+SD AIQL
Sbjct: 75   ASVLNQWENEGKRLTKWELCRVVKELRKFKRFKMALEVYEWMNNRGERFRLSSSDAAIQL 134

Query: 494  DLISKVQGISDAEDYFMKLPDSLKDKRIYGALLNSYVRAKKKKKAESMISQMKDRGYASH 673
            DLI+KV G+S AEDYF +LPD+LKDKRIYGALLN+YV+AK + KAE +I +++++GYA+ 
Sbjct: 135  DLIAKVCGVSSAEDYFSRLPDTLKDKRIYGALLNAYVQAKMRDKAEILIEKLRNKGYATT 194

Query: 674  ALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPLDIYTYNIWLSSCGSQGSAEKMEQVFE 853
             LP+NVMMTLYMN K+ DKV  +++EMM K I LDIY+YNIWLSSC    S E+MEQVFE
Sbjct: 195  PLPFNVMMTLYMNLKELDKVQSMISEMMNKNIQLDIYSYNIWLSSC---ESTERMEQVFE 251

Query: 854  QMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEYLRKVEGRFTGRDRMPYHFLITLYGSS 1033
            QMKL+ TINPNWTTFSTMATMYIK+GQ EK EE L+KVE R T RDRMPYH+LI+LYGS+
Sbjct: 252  QMKLERTINPNWTTFSTMATMYIKLGQFEKAEECLKKVESRITNRDRMPYHYLISLYGST 311

Query: 1034 GNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVRVDDIEMAEKIYEEWLTVKSTYDPRIA 1213
            GNK E  RAWN YK  FP IPNLGYHA++SSLVRV D+E AEKIYEEWL+VKS+YDPRI 
Sbjct: 312  GNKAEVYRAWNIYKSKFPNIPNLGYHALISSLVRVGDLEGAEKIYEEWLSVKSSYDPRIG 371

Query: 1214 NLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPTTWEILGEIYINKKRISEAVSCLQEAT 1393
            NL++G YV+ G  EKAE F   +++ AGGK N TTWEIL E     K+IS+A+SC + A 
Sbjct: 372  NLLLGCYVKEGFLEKAEGFLDHMIE-AGGKPNSTTWEILAEGNTGVKKISDALSCFKRAV 430

Query: 1394 LVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVLFGILKKLGCLNDEVYASYISITDAGT 1573
            L EGS  WKPKP NVS  L LC++E D  +K+ L G+L+++GCL DE YAS   +     
Sbjct: 431  LAEGSNGWKPKPVNVSAFLDLCEEEADTATKEALMGLLRQMGCLEDEPYASLFGLHTGSV 490

Query: 1574 VSDELPMEKD--GAD-DVEENAE 1633
              +EL  EKD  GAD D++E+ +
Sbjct: 491  TGNELSNEKDRTGADKDIDEDED 513


>ref|XP_002327026.1| predicted protein [Populus trichocarpa] gi|222835341|gb|EEE73776.1|
            predicted protein [Populus trichocarpa]
          Length = 539

 Score =  643 bits (1658), Expect = 0.0
 Identities = 307/526 (58%), Positives = 407/526 (77%)
 Frame = +2

Query: 56   LPQPRLYPHQFHNTTNASSSYSLQFPSGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMD 235
            L QP L+ H+   +++ S S+S+ + S    ST   ++  +K P I C +  VH YGT+D
Sbjct: 2    LLQPALHHHKVSLSSSISYSHSVPWKSP--KSTLHQTVNHKKLPVIICSISQVHNYGTVD 59

Query: 236  YENKPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKELRKFRHFKL 415
            YE +P +KW+  Y+RISLMENPE G+ S+LN+ ENEGK+ TKWELCRVVKELRK++ ++ 
Sbjct: 60   YERRPMIKWNGIYRRISLMENPELGSGSVLNRWENEGKRLTKWELCRVVKELRKYKRYQQ 119

Query: 416  ALEVYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKDKRIYGALLN 595
            ALEVY+WM  R +RFR+S SD AIQLDLI+KV+G+S AED+F+ LP++ KD+R+YGALLN
Sbjct: 120  ALEVYDWMKNRQERFRLSPSDAAIQLDLIAKVRGVSTAEDFFLSLPNTFKDRRVYGALLN 179

Query: 596  SYVRAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPL 775
            +YV+ + ++KAE++  +M+D+GY +HALP+NV MTLYMN K+YDKVDL+++EM EK I L
Sbjct: 180  AYVQNRMREKAETLFDEMRDKGYVTHALPFNVTMTLYMNIKEYDKVDLMISEMNEKNIKL 239

Query: 776  DIYTYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEY 955
            DIY+YNIWLSSCGSQGSA+KMEQV+EQMK D +INPNWTTFSTMATMYIKMGQ EK E+ 
Sbjct: 240  DIYSYNIWLSSCGSQGSADKMEQVYEQMKSDRSINPNWTTFSTMATMYIKMGQFEKAEDC 299

Query: 956  LRKVEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVR 1135
            LR+VE R TGRDR+PYH+L++LYG+ GNKEE  R WN YK  FP+IPNLGYHAI+SSLVR
Sbjct: 300  LRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAIISSLVR 359

Query: 1136 VDDIEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPT 1315
            +DDIE AEKIYEEWL++K++YDPRIANL +  YV  GN ++A+ FF  +++  GGK N  
Sbjct: 360  LDDIEGAEKIYEEWLSIKTSYDPRIANLFIAAYVYQGNLDEAKSFFDHMLE-DGGKPNSN 418

Query: 1316 TWEILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVL 1495
            TWEIL + +I+++R SEA+SCL+EA +  GSK WKP P NV++  KLC++E D  +K+ L
Sbjct: 419  TWEILAQGHISERRTSEALSCLKEAFVTPGSKSWKPNPANVTSFFKLCEEEADMANKEAL 478

Query: 1496 FGILKKLGCLNDEVYASYISITDAGTVSDELPMEKDGADDVEENAE 1633
             G L++ G L D+ YAS + +   G   DEL  ++DG  D  +N E
Sbjct: 479  EGFLRQSGHLKDKAYASLLGMPVTG---DELSTKEDGTGDQIDNEE 521


>ref|XP_002301239.1| predicted protein [Populus trichocarpa] gi|222842965|gb|EEE80512.1|
            predicted protein [Populus trichocarpa]
          Length = 497

 Score =  632 bits (1631), Expect = e-179
 Identities = 301/496 (60%), Positives = 389/496 (78%)
 Frame = +2

Query: 56   LPQPRLYPHQFHNTTNASSSYSLQFPSGFCNSTNLSSIKSRKHPCITCYVPLVHKYGTMD 235
            L QP L+ H+   + +++ SYS   P    N T   ++  +K P ITC +  +H YGT+D
Sbjct: 2    LLQPSLHHHKV--SLSSTISYSHPLPWKNPNFTLHQTVNYKKLPVITCSISQIHNYGTVD 59

Query: 236  YENKPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKELRKFRHFKL 415
            YE +P +KW+  Y+RISLMENPE G+ S+LNQ EN+GK+ TKWELCRVVKELRK++ ++ 
Sbjct: 60   YERRPMMKWNAIYRRISLMENPELGSGSVLNQWENDGKRLTKWELCRVVKELRKYKRYQQ 119

Query: 416  ALEVYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKDKRIYGALLN 595
            ALEVY+WMN R +RF +S SD AIQLDLI+KV+G+S AED+F++LP++ KD+RIYGALLN
Sbjct: 120  ALEVYDWMNNRQERFGLSPSDAAIQLDLIAKVRGVSSAEDFFLRLPNTFKDRRIYGALLN 179

Query: 596  SYVRAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVAEMMEKQIPL 775
            +YVR + ++KAES+I +M+ + Y +HALPYNVMMTLYMN  +YDKVDL+++EM EK I L
Sbjct: 180  AYVRNRMREKAESLIDEMRGKDYVTHALPYNVMMTLYMNINEYDKVDLIISEMNEKNIKL 239

Query: 776  DIYTYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKMGQVEKGEEY 955
            DIY+YNIWLSSCG QGSA+KMEQVFEQMK DG+INPNWTTFSTMATMYIKMG+ EK E+ 
Sbjct: 240  DIYSYNIWLSSCGLQGSADKMEQVFEQMKSDGSINPNWTTFSTMATMYIKMGKFEKAEDC 299

Query: 956  LRKVEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGYHAIVSSLVR 1135
            LR+VE R TGRDR+PYH+L++LYG+ GNKEE  R WN YK  FP+IPNLGYHA++SSLVR
Sbjct: 300  LRRVESRITGRDRIPYHYLLSLYGNVGNKEEVYRVWNIYKSIFPSIPNLGYHAMISSLVR 359

Query: 1136 VDDIEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVDVAGGKRNPT 1315
            +DDIE AEKIYEEWL++K++YDPRIANL M  +V  GN +KAE FF  +++  GGK N  
Sbjct: 360  MDDIEGAEKIYEEWLSIKTSYDPRIANLFMAAFVYQGNLDKAESFFDHMLE-EGGKPNSH 418

Query: 1316 TWEILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQEGDEDSKDVL 1495
            +WEIL + +I+++R SEA+SCL+EA    GSK WKP P NVS+  KLC++E D  SK+ L
Sbjct: 419  SWEILAQGHISERRTSEALSCLKEAFATPGSKSWKPNPANVSSFFKLCEEEVDMASKEAL 478

Query: 1496 FGILKKLGCLNDEVYA 1543
               L++ G L D+ YA
Sbjct: 479  ASFLRQSGHLKDKAYA 494


>ref|XP_004133941.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02150-like
            [Cucumis sativus] gi|449525818|ref|XP_004169913.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g02150-like [Cucumis sativus]
          Length = 537

 Score =  619 bits (1597), Expect = e-175
 Identities = 305/535 (57%), Positives = 397/535 (74%), Gaps = 3/535 (0%)
 Frame = +2

Query: 38   MLLQSSLPQPRLYPHQFHNTTNASS--SYSLQFPSGFCNSTNLSSIKSRKHPC-ITCYVP 208
            MLLQ+S+          H T +  S  SYS +F     +     ++  R+ P  +TC + 
Sbjct: 1    MLLQTSV---------HHRTVSLPSPISYSRKFLPLIQSQPFFHNVNYRRLPLSVTCSIS 51

Query: 209  LVHKYGTMDYENKPPLKWSYYYKRISLMENPEKGAASILNQCENEGKKFTKWELCRVVKE 388
             VH YGT+D+E +P  KW+  Y+RISLMENPE G+AS+LNQ ENEGK  TKWEL RVVKE
Sbjct: 52   QVHSYGTVDFERRPMFKWNAIYRRISLMENPELGSASVLNQWENEGKNITKWELSRVVKE 111

Query: 389  LRKFRHFKLALEVYEWMNTRADRFRISTSDTAIQLDLISKVQGISDAEDYFMKLPDSLKD 568
            LRK++ F+ ALE+Y+WM+ R +RFR++TSD AIQLDLISKV+GI  AE+YF++LP+ LKD
Sbjct: 112  LRKYKRFERALEIYDWMSNREERFRLTTSDAAIQLDLISKVRGIKSAEEYFLRLPNHLKD 171

Query: 569  KRIYGALLNSYVRAKKKKKAESMISQMKDRGYASHALPYNVMMTLYMNYKDYDKVDLVVA 748
            +RIYGALLN+Y + ++++KAE+++ +M+ +G+ +H LP+NVMMTLYMN K+Y+KV+ +V+
Sbjct: 172  RRIYGALLNAYAKGRQREKAENLLEKMRTKGFTTHPLPFNVMMTLYMNVKEYEKVESLVS 231

Query: 749  EMMEKQIPLDIYTYNIWLSSCGSQGSAEKMEQVFEQMKLDGTINPNWTTFSTMATMYIKM 928
            EM E  I LDIY+YNIWLSSCG QGS EKME+V+EQMK D TIN NWTTFSTMATMYIKM
Sbjct: 232  EMTENSIQLDIYSYNIWLSSCGLQGSTEKMEEVYEQMKQDRTINANWTTFSTMATMYIKM 291

Query: 929  GQVEKGEEYLRKVEGRFTGRDRMPYHFLITLYGSSGNKEEALRAWNNYKKTFPTIPNLGY 1108
            G +EK EE LR+VE R  GRDR+PYH+LI+LYGS GNKEE  R WN YK  FPTIPNLGY
Sbjct: 292  GLMEKAEECLRRVESRIVGRDRIPYHYLISLYGSVGNKEEMYRVWNIYKNVFPTIPNLGY 351

Query: 1109 HAIVSSLVRVDDIEMAEKIYEEWLTVKSTYDPRIANLIMGWYVRNGNFEKAEEFFQDIVD 1288
            HAI+S+L+RV D+E AEKIYEEWLTVKSTYDPRIANL +GWYV+ GN  KAE FF  +V+
Sbjct: 352  HAIISALIRVGDVEGAEKIYEEWLTVKSTYDPRIANLFIGWYVKEGNTSKAESFFDHMVE 411

Query: 1289 VAGGKRNPTTWEILGEIYINKKRISEAVSCLQEATLVEGSKFWKPKPTNVSTILKLCKQE 1468
            V GGK N +TWEIL + +  + R+S+A++  +EA   EGSK W+PKP NV     LC++E
Sbjct: 412  V-GGKPNSSTWEILVDRHTKEGRVSDALASWKEAFSAEGSKSWRPKPYNVLAYFDLCEKE 470

Query: 1469 GDEDSKDVLFGILKKLGCLNDEVYASYISITDAGTVSDELPMEKDGADDVEENAE 1633
            GD  SK+VL G+L++   L D+ YAS I + D    ++E+  +    +D  +  E
Sbjct: 471  GDIASKEVLVGLLRQPKYLQDKTYASLIGLLDETIDNNEVSEKGSNINDEIDKTE 525


Top