BLASTX nr result

ID: Cnidium21_contig00014174 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014174
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317793.1| f-box family protein [Populus trichocarpa] g...    59   4e-07

>ref|XP_002317793.1| f-box family protein [Populus trichocarpa]
           gi|222858466|gb|EEE96013.1| f-box family protein
           [Populus trichocarpa]
          Length = 297

 Score = 59.3 bits (142), Expect = 4e-07
 Identities = 61/170 (35%), Positives = 77/170 (45%), Gaps = 15/170 (8%)
 Frame = -3

Query: 540 QNPNIIKIFHEGSQDLNLAYPPTNYSYNTTSGIVPHEFVEFTN----------SATSSHN 391
           QNP I    HEG QDLNLAYPP+   Y+  S  V   F   +N          S + SH+
Sbjct: 124 QNPKI----HEG-QDLNLAYPPSADDYSNLSEFVEIPFDTESNKTHHQNPNPSSTSPSHH 178

Query: 390 NF-----SQFLKSGINGGRGFSSFMSMIPVXXXXXXXXXXXXXXXXLPFQEFSKTNGLNF 226
           +       +FLKS     RGFS+FMS+ P+                 P QEF  T   NF
Sbjct: 179 HHHHVSPMEFLKSTAMNSRGFSAFMSIPPL-----SDSNNTMFSTGFPLQEFKSTQ--NF 231

Query: 225 SINHHQLGFDNSRSPGGYGSFLQAVHQENNSTITNHAKLLNFPIEDHLKQ 76
           S+   + G+ N+          Q VH+   S     A+LL FPIED LKQ
Sbjct: 232 SLEGLESGYSNT----------QGVHETCGS-----ARLL-FPIED-LKQ 264


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