BLASTX nr result

ID: Cnidium21_contig00014171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014171
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   456   e-126
emb|CBI32700.3| unnamed protein product [Vitis vinifera]              450   e-124
ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putativ...   444   e-122
emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]   443   e-122
ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   432   e-118

>ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
          Length = 524

 Score =  456 bits (1172), Expect = e-126
 Identities = 242/341 (70%), Positives = 275/341 (80%), Gaps = 2/341 (0%)
 Frame = +1

Query: 61   MNKDTSFLFSGIKFDRKKFAADFSKFKEKKETAGTNEQFLENESSVSEAETLPLXXXXXX 240
            M K TSFLFSGI FD+KKFAADFS+FKEKKE+    +  +E+  S +E    P+      
Sbjct: 1    MEKGTSFLFSGITFDKKKFAADFSRFKEKKES----DDLVESGKSEAEEGARPVKKRKRK 56

Query: 241  XXXXXXXXXXEGFNVFKASTSEVVS-KENDVTEVDF-EAKKEYHRQMERDALLRKKHNIH 414
                      EGFNVFK S S     ++ND  + +  +AKKE +RQ+ERDALLRKKH IH
Sbjct: 57   ATVADPV---EGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIH 113

Query: 415  VSGMNVPSPLQTFAELRSRYKCRSFLVRNLAELRFKEPTPIQRQAIPVLLSGRECFACAP 594
            +SG NVPSPL+ F+EL SRY C S+L+ NLAEL FKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 114  ISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAP 173

Query: 595  TGSGKTLAFVCPMLIKLKHASTDGIRALILLPTRELAAQTARECKKLTKGTKFHIKLMTK 774
            TGSGKTLAFVCPML+KLKHAS DGIRA+IL PTRELAAQTARE KKL KG KF+IKL+TK
Sbjct: 174  TGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTK 233

Query: 775  QLVKSADFSKLHCDILISTPYRVQYAIRKKKLDLSRVEYLVLDESDKLFELGLVKQVDTI 954
            +L++S D SKL CDILISTP R++ AIRKKKLDLSRVEYLVLDESDKLFELGLVKQ+D +
Sbjct: 234  ELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAV 293

Query: 955  AKACSNPSIMRSLFSATLPDSVEELARTLMHDAVRVIIGRK 1077
             KACSNPSI+RSLFSATLPD VEELART+MHDAVRVIIGRK
Sbjct: 294  VKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRK 334


>emb|CBI32700.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  450 bits (1158), Expect = e-124
 Identities = 239/341 (70%), Positives = 274/341 (80%), Gaps = 2/341 (0%)
 Frame = +1

Query: 61   MNKDTSFLFSGIKFDRKKFAADFSKFKEKKETAGTNEQFLENESSVSEAETLPLXXXXXX 240
            M K TSFLFSGI FD+KKFAADFS+FK+K+     ++  +E+  S +E    P+      
Sbjct: 1    MEKGTSFLFSGITFDKKKFAADFSRFKKKE-----SDDLVESGKSEAEEGARPVKKRKRK 55

Query: 241  XXXXXXXXXXEGFNVFKASTSEVVS-KENDVTEVDF-EAKKEYHRQMERDALLRKKHNIH 414
                      EGFNVFK S S     ++ND  + +  +AKKE +RQ+ERDALLRKKH IH
Sbjct: 56   ATVADPV---EGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHKIH 112

Query: 415  VSGMNVPSPLQTFAELRSRYKCRSFLVRNLAELRFKEPTPIQRQAIPVLLSGRECFACAP 594
            +SG NVPSPL+ F+EL SRY C S+L+ NLAEL FKEPTPIQRQAIPVLLSGRECFACAP
Sbjct: 113  ISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFACAP 172

Query: 595  TGSGKTLAFVCPMLIKLKHASTDGIRALILLPTRELAAQTARECKKLTKGTKFHIKLMTK 774
            TGSGKTLAFVCPML+KLKHAS DGIRA+IL PTRELAAQTARE KKL KG KF+IKL+TK
Sbjct: 173  TGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTK 232

Query: 775  QLVKSADFSKLHCDILISTPYRVQYAIRKKKLDLSRVEYLVLDESDKLFELGLVKQVDTI 954
            +L++S D SKL CDILISTP R++ AIRKKKLDLSRVEYLVLDESDKLFELGLVKQ+D +
Sbjct: 233  ELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAV 292

Query: 955  AKACSNPSIMRSLFSATLPDSVEELARTLMHDAVRVIIGRK 1077
             KACSNPSI+RSLFSATLPD VEELART+MHDAVRVIIGRK
Sbjct: 293  VKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRK 333


>ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223540033|gb|EEF41611.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 535

 Score =  444 bits (1143), Expect = e-122
 Identities = 232/346 (67%), Positives = 277/346 (80%), Gaps = 7/346 (2%)
 Frame = +1

Query: 61   MNKDTSFLFSGIKFDRKKFAADFSKFKEKKE---TAGTNEQFLENESSVSEAETLPLXXX 231
            M K TSFLF+GI F++KKFA DFS+FKEKKE    A T++  L  E+  SE + + +   
Sbjct: 1    MEKGTSFLFAGITFNKKKFATDFSRFKEKKECNDNAQTDDLRLL-EAGKSEPDQVHVSVK 59

Query: 232  XXXXXXXXXXXXXEGFNVFKASTSEVV--SKENDVTEVD--FEAKKEYHRQMERDALLRK 399
                         EGFNVFK+S S  +  +++ND  E+D  F   KE ++Q+ERDALLRK
Sbjct: 60   KRKRKNVASSEKVEGFNVFKSSKSVALPSNQQNDQDEIDQPFRKNKELNKQIERDALLRK 119

Query: 400  KHNIHVSGMNVPSPLQTFAELRSRYKCRSFLVRNLAELRFKEPTPIQRQAIPVLLSGREC 579
              +IHVSG N+PSPLQ F+EL SRY C S+L+ NL EL FKEPTPIQRQAIPVLLSGREC
Sbjct: 120  HFHIHVSGNNIPSPLQNFSELSSRYGCESYLLHNLVELGFKEPTPIQRQAIPVLLSGREC 179

Query: 580  FACAPTGSGKTLAFVCPMLIKLKHASTDGIRALILLPTRELAAQTARECKKLTKGTKFHI 759
            FACAPTGSGKTLAFVCPML+KLKH+S DGIRA+IL PTRELA+QT RECKK+ KG KF I
Sbjct: 180  FACAPTGSGKTLAFVCPMLMKLKHSSKDGIRAVILCPTRELASQTTRECKKMAKGNKFRI 239

Query: 760  KLMTKQLVKSADFSKLHCDILISTPYRVQYAIRKKKLDLSRVEYLVLDESDKLFELGLVK 939
            KLMTK+LV++ D S+L CDIL+STP R+Q AIRKKK+DLSRVEYLVLDESDKLFELGL+K
Sbjct: 240  KLMTKELVRTKDLSRLPCDILVSTPLRLQLAIRKKKVDLSRVEYLVLDESDKLFELGLLK 299

Query: 940  QVDTIAKACSNPSIMRSLFSATLPDSVEELARTLMHDAVRVIIGRK 1077
            Q+D++ KACSNPS++RSLFSATLP+SVEELART+MHDAVRVI+GRK
Sbjct: 300  QIDSVFKACSNPSVIRSLFSATLPESVEELARTIMHDAVRVIVGRK 345


>emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]
          Length = 554

 Score =  443 bits (1140), Expect = e-122
 Identities = 238/341 (69%), Positives = 271/341 (79%), Gaps = 2/341 (0%)
 Frame = +1

Query: 61   MNKDTSFLFSGIKFDRKKFAADFSKFKEKKETAGTNEQFLENESSVSEAETLPLXXXXXX 240
            M K TSFLFSGI FD+KKFAADFS+FKEKKE+    +  +E+  S +E    P+      
Sbjct: 1    MEKGTSFLFSGITFDKKKFAADFSRFKEKKES----DDLVESGKSEAEEGARPVKKRKRK 56

Query: 241  XXXXXXXXXXEGFNVFKASTSEVVS-KENDVTEVDF-EAKKEYHRQMERDALLRKKHNIH 414
                      EGFNVFK S S     ++ND  + +  +AKKE +RQ+ERDALLRKKH IH
Sbjct: 57   ATVADPV---EGFNVFKTSKSSAQGIQQNDQEKSELSQAKKELNRQIERDALLRKKHXIH 113

Query: 415  VSGMNVPSPLQTFAELRSRYKCRSFLVRNLAELRFKEPTPIQRQAIPVLLSGRECFACAP 594
            +SG NVPSPL+ F+EL SRY C S+L+ NLAEL FKEPTPIQRQAIP    GRECFACAP
Sbjct: 114  ISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIP----GRECFACAP 169

Query: 595  TGSGKTLAFVCPMLIKLKHASTDGIRALILLPTRELAAQTARECKKLTKGTKFHIKLMTK 774
            TGSGKTLAFVCPML+KLKHAS DGIRA+IL PTRELAAQTARE KKL KG KF+IKL+TK
Sbjct: 170  TGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLLTK 229

Query: 775  QLVKSADFSKLHCDILISTPYRVQYAIRKKKLDLSRVEYLVLDESDKLFELGLVKQVDTI 954
            +L++S D SKL CDILISTP R++ AIRKKKLDLSRVEYLVLDESDKLFELGLVKQ+D +
Sbjct: 230  ELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQIDAV 289

Query: 955  AKACSNPSIMRSLFSATLPDSVEELARTLMHDAVRVIIGRK 1077
             KACSNPSI+RSLFSATLPD VEELART+MHDAVRVIIGRK
Sbjct: 290  VKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRK 330


>ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
            sativus]
          Length = 616

 Score =  432 bits (1110), Expect = e-118
 Identities = 226/348 (64%), Positives = 271/348 (77%), Gaps = 9/348 (2%)
 Frame = +1

Query: 61   MNKDTSFLFSGIKFDRKKFAADFSKFKEKKETAGTNEQFLENESSVSEA-----ETLPLX 225
            M K TSFLF+GI FD+K+FAADF+KF+ KKE+    +  +E  SS+        E     
Sbjct: 1    MEKGTSFLFAGIHFDKKRFAADFAKFEGKKES----DNVVEGPSSIDNGDLEVHEGSTPS 56

Query: 226  XXXXXXXXXXXXXXXEGFNVFKASTSEV---VSKENDVTEVD-FEAKKEYHRQMERDALL 393
                           EGF+VFK S S     +++EN ++E D  E KKE++R++ERDAL 
Sbjct: 57   DKRKRKRKSATAKSVEGFSVFKDSKSTADTSLNEENHLSENDPSEEKKEFYRKLERDALF 116

Query: 394  RKKHNIHVSGMNVPSPLQTFAELRSRYKCRSFLVRNLAELRFKEPTPIQRQAIPVLLSGR 573
            RKK+NIHVSG NVPSPLQ F EL +RY C S+L+ NL EL FKEPTPIQRQAIPVLLSGR
Sbjct: 117  RKKYNIHVSGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQAIPVLLSGR 176

Query: 574  ECFACAPTGSGKTLAFVCPMLIKLKHASTDGIRALILLPTRELAAQTARECKKLTKGTKF 753
            ECFACAPTGSGKTLAFVCPML++LK  S +GIRA+IL PTRELA+QT RECKKL KG KF
Sbjct: 177  ECFACAPTGSGKTLAFVCPMLMRLKDPSKEGIRAVILCPTRELASQTIRECKKLAKGKKF 236

Query: 754  HIKLMTKQLVKSADFSKLHCDILISTPYRVQYAIRKKKLDLSRVEYLVLDESDKLFELGL 933
            HIKL+TK++++ ADFSK  CD+LISTP R++ AIRKKK+DLSRVEYLVLDESDKLFELGL
Sbjct: 237  HIKLVTKEVLRHADFSKFSCDVLISTPLRLRLAIRKKKIDLSRVEYLVLDESDKLFELGL 296

Query: 934  VKQVDTIAKACSNPSIMRSLFSATLPDSVEELARTLMHDAVRVIIGRK 1077
            +KQ+D + KACSNPSI+RSLFSATLPD VE+LAR++MHDAVRVI+GRK
Sbjct: 297  IKQIDAVVKACSNPSIVRSLFSATLPDFVEDLARSVMHDAVRVIVGRK 344


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