BLASTX nr result
ID: Cnidium21_contig00014164
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00014164
(1881 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 725 0.0
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2... 717 0.0
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 715 0.0
ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana] gi|334302... 672 0.0
ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arab... 671 0.0
>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
gi|297740757|emb|CBI30939.3| unnamed protein product
[Vitis vinifera]
Length = 516
Score = 725 bits (1872), Expect = 0.0
Identities = 367/506 (72%), Positives = 415/506 (82%)
Frame = +2
Query: 50 EEEKKNNIPVLPWMRSPVDVDSIPKCPLDEVPLLDSKLTAALQTSGIASLFPVQLAVWQE 229
E ++K N+PVLPWMRSP+DV +CPL P LD +L AL+ G +SLFPVQ+AVWQE
Sbjct: 3 EAKQKKNVPVLPWMRSPIDVSLFEECPLHLFPCLDPRLEVALKNMGFSSLFPVQVAVWQE 62
Query: 230 TIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSTRSVKYLRALVVLPTRDLALQVKEVF 409
T+GPG+FERDLCINSPTGSGKTLAYALPIV +LS+R+VK LRALVVLPTRDLALQVKEVF
Sbjct: 63 TVGPGAFERDLCINSPTGSGKTLAYALPIVNVLSSRAVKCLRALVVLPTRDLALQVKEVF 122
Query: 410 NTIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDFSEELQSSVDILVATPG 589
IAPAVGLSVGLAVGQ+SIADEISELIKRPKLEAGICYDPED S ELQSSVDILVATPG
Sbjct: 123 AAIAPAVGLSVGLAVGQTSIADEISELIKRPKLEAGICYDPEDISLELQSSVDILVATPG 182
Query: 590 RLMDHINNTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLQLTRSIDGSLFPHAKIFLP 769
RLMDHIN TKGFTL+HL YLVVDETDRLLREAYQSWLPTVLQLTRS D SLFP K LP
Sbjct: 183 RLMDHINTTKGFTLKHLRYLVVDETDRLLREAYQSWLPTVLQLTRSSDESLFPCGKTILP 242
Query: 770 TAFGSIKTTRRTGVERGFKGKPYPRLTKMILSATLTQDPSKLSQLELHHPLFLTSGQMRY 949
+ FGS+ T RR GVERGFKG+ YPRL K++LSATLTQDPSKL+ L+LHHPL LT+GQ RY
Sbjct: 243 STFGSMNTIRRCGVERGFKGRSYPRLVKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRY 302
Query: 950 QFPEQMQLLKVICEPNCKPLYLVALLQSLHGEKSIVFTSSVDSTHRLCALLKFFGDLNIK 1129
Q PE+++ K+ICE KPLYLVALL+ L GEK IVFTSSV+S HRLC LL FFGDL IK
Sbjct: 303 QLPEKLKSFKLICESKLKPLYLVALLRDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQIK 362
Query: 1130 INEYSGVQRQAVRSKTLKAFRTGEVQVLVSSDAMTRGMDVEGVRNVINYDTPPYIKTFIH 1309
I EYSG+Q Q VRSKTL+ FR G++QVL+SSD MTRGMDVEGVRNVINYD P +IKT+IH
Sbjct: 363 IGEYSGLQHQRVRSKTLEEFRGGKIQVLISSDGMTRGMDVEGVRNVINYDVPKFIKTYIH 422
Query: 1310 XXXXXXXXXXXXXCFTLLHNDEDRRFKKILRKADNNSCSRHSVTPDSLEPLRSVYASALT 1489
CFTLL DED+RFK++L+KAD++SC HSV +S+E L SVY SAL
Sbjct: 423 RAGRTARAGQTGRCFTLLRKDEDKRFKQLLQKADSDSCPVHSVASNSIEALHSVYVSALE 482
Query: 1490 KLKESVESETYKKRKAGMRSSHMGKR 1567
KLKE+V SET +KRK +SS KR
Sbjct: 483 KLKETVVSETTRKRKINFKSSGADKR 508
>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
predicted protein [Populus trichocarpa]
Length = 518
Score = 717 bits (1850), Expect = 0.0
Identities = 361/510 (70%), Positives = 414/510 (81%)
Frame = +2
Query: 35 MKEGHEEEKKNNIPVLPWMRSPVDVDSIPKCPLDEVPLLDSKLTAALQTSGIASLFPVQL 214
M+E ++ N+PVLPWMRSPVDV + PLD +P LD +L ALQ G +LFPVQ+
Sbjct: 1 MEESTIAKQNKNVPVLPWMRSPVDVSKFEEYPLDILPCLDPRLKMALQNMGFKTLFPVQI 60
Query: 215 AVWQETIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSTRSVKYLRALVVLPTRDLALQ 394
AVWQETIGPG+FERDLCINSPTGSGKTLAYALPIVQ+LSTR+VK LRALVVLPTRDLALQ
Sbjct: 61 AVWQETIGPGAFERDLCINSPTGSGKTLAYALPIVQLLSTRAVKCLRALVVLPTRDLALQ 120
Query: 395 VKEVFNTIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDFSEELQSSVDIL 574
VK+VF IAPA+GLSVGLAVGQSSIADEISELIK+P+ EAGICYDP+D +ELQSSVDIL
Sbjct: 121 VKQVFAAIAPAMGLSVGLAVGQSSIADEISELIKKPEHEAGICYDPQDVLQELQSSVDIL 180
Query: 575 VATPGRLMDHINNTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLQLTRSIDGSLFPHA 754
VATPGRLMDHI TKGFTLEHLCYLVVDETDRLLRE+YQSWLPTVL+LTR D SL P
Sbjct: 181 VATPGRLMDHITTTKGFTLEHLCYLVVDETDRLLRESYQSWLPTVLKLTRPYDESLVPGV 240
Query: 755 KIFLPTAFGSIKTTRRTGVERGFKGKPYPRLTKMILSATLTQDPSKLSQLELHHPLFLTS 934
FLP A GS+KT RR GVERGFKGK YPRL KM+LSATLTQDPSKL+QL LHHPLFLT+
Sbjct: 241 NNFLPCASGSLKTIRRCGVERGFKGKSYPRLAKMVLSATLTQDPSKLAQLNLHHPLFLTT 300
Query: 935 GQMRYQFPEQMQLLKVICEPNCKPLYLVALLQSLHGEKSIVFTSSVDSTHRLCALLKFFG 1114
GQ RYQ PE+++ K+IC KPLYLVA+LQ L GEK IVFTSSV+STHRLC LL FFG
Sbjct: 301 GQRRYQLPEKLESYKLICVSKLKPLYLVAVLQHLGGEKCIVFTSSVESTHRLCTLLNFFG 360
Query: 1115 DLNIKINEYSGVQRQAVRSKTLKAFRTGEVQVLVSSDAMTRGMDVEGVRNVINYDTPPYI 1294
DL +KI EYSG+QRQ+VRSKTLKAFR GE+QVLVSSDAMTRGMD+EGVRN+INYD P Y+
Sbjct: 361 DLKVKIKEYSGLQRQSVRSKTLKAFREGEIQVLVSSDAMTRGMDIEGVRNIINYDMPAYV 420
Query: 1295 KTFIHXXXXXXXXXXXXXCFTLLHNDEDRRFKKILRKADNNSCSRHSVTPDSLEPLRSVY 1474
KT++H C TLL E +RFKK+L+KADN+SC +S+ S++ L Y
Sbjct: 421 KTYVHRAGRTARAGQTGRCITLLRTHEVKRFKKLLQKADNDSCPIYSIPSSSVKSLHPFY 480
Query: 1475 ASALTKLKESVESETYKKRKAGMRSSHMGK 1564
SAL KLKE+V+SET +K K G++ S + K
Sbjct: 481 LSALEKLKETVQSETSRKGKVGIKFSRVSK 510
>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
sativus]
Length = 517
Score = 715 bits (1845), Expect = 0.0
Identities = 367/506 (72%), Positives = 419/506 (82%)
Frame = +2
Query: 50 EEEKKNNIPVLPWMRSPVDVDSIPKCPLDEVPLLDSKLTAALQTSGIASLFPVQLAVWQE 229
+++K+ IPVLPWMRSPVDV I +CPL+ +P+LD +L AALQ GI+SLFPVQLAVWQE
Sbjct: 3 DKQKRKRIPVLPWMRSPVDVSLIEECPLEILPMLDHRLKAALQNMGISSLFPVQLAVWQE 62
Query: 230 TIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSTRSVKYLRALVVLPTRDLALQVKEVF 409
IGPGSF+RDLCINSPTGSGKTLAYALPIVQMLS+R+VK LRALVVLPTRDLALQVKEVF
Sbjct: 63 AIGPGSFDRDLCINSPTGSGKTLAYALPIVQMLSSRTVKCLRALVVLPTRDLALQVKEVF 122
Query: 410 NTIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDFSEELQSSVDILVATPG 589
+ IAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDP+DF ELQSSVDILVATPG
Sbjct: 123 SAIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPDDFLVELQSSVDILVATPG 182
Query: 590 RLMDHINNTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLQLTRSIDGSLFPHAKIFLP 769
RLMDHIN TKGFTL+HL YLV+DETDRLLREAYQSWLPTVLQLT + D S+ + I P
Sbjct: 183 RLMDHINFTKGFTLQHLRYLVIDETDRLLREAYQSWLPTVLQLTHADDSSIIFPSYISNP 242
Query: 770 TAFGSIKTTRRTGVERGFKGKPYPRLTKMILSATLTQDPSKLSQLELHHPLFLTSGQMRY 949
+ GS+KT RR GVERGFKGKPYPRL KM+LSATLTQDP KL+QL+LHHPLFLT+G+ RY
Sbjct: 243 CSDGSLKTIRRFGVERGFKGKPYPRLAKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRY 302
Query: 950 QFPEQMQLLKVICEPNCKPLYLVALLQSLHGEKSIVFTSSVDSTHRLCALLKFFGDLNIK 1129
+ PE+++ +ICE KPLYLVALLQSL EK IVFTSSV+STHRLC+LL FF DL +K
Sbjct: 303 KLPEKLESYMMICESKLKPLYLVALLQSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELK 362
Query: 1130 INEYSGVQRQAVRSKTLKAFRTGEVQVLVSSDAMTRGMDVEGVRNVINYDTPPYIKTFIH 1309
I EYSG+QRQ++RSKTL AFR GE+QVLVSSDAMTRGMDVEGV+NVINYD P +IKT+IH
Sbjct: 363 IKEYSGLQRQSLRSKTLNAFRGGEIQVLVSSDAMTRGMDVEGVKNVINYDMPAFIKTYIH 422
Query: 1310 XXXXXXXXXXXXXCFTLLHNDEDRRFKKILRKADNNSCSRHSVTPDSLEPLRSVYASALT 1489
CFTLL DE +RFKK+L+KADN+SC H++ S+E L+ Y SAL
Sbjct: 423 RAGRTARAGQSGRCFTLLRKDEVKRFKKLLQKADNDSCPVHNLPSSSIEFLQPTYVSALE 482
Query: 1490 KLKESVESETYKKRKAGMRSSHMGKR 1567
KLKE VESET +K SS GK+
Sbjct: 483 KLKEKVESETSRKSTI-TSSSRAGKQ 507
>ref|NP_193320.6| RNA helicase 1 [Arabidopsis thaliana]
gi|334302879|sp|Q7FGZ2.3|RH1_ARATH RecName: Full=DEAD-box
ATP-dependent RNA helicase 1 gi|332658259|gb|AEE83659.1|
RNA helicase 1 [Arabidopsis thaliana]
Length = 522
Score = 672 bits (1733), Expect = 0.0
Identities = 335/499 (67%), Positives = 399/499 (79%)
Frame = +2
Query: 50 EEEKKNNIPVLPWMRSPVDVDSIPKCPLDEVPLLDSKLTAALQTSGIASLFPVQLAVWQE 229
+E+K V+PWMR+PVDV ++ C LD +P L+ KL AL+ GI+SLFPVQ+AVW E
Sbjct: 5 KEDKTEMDSVVPWMRAPVDVSNVENCALDTLPCLNPKLKKALENMGISSLFPVQVAVWHE 64
Query: 230 TIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSTRSVKYLRALVVLPTRDLALQVKEVF 409
TIGPG FERD+C+NSPTGSGKTL+YALPIVQ+L++R V+ LRALVVLPTRDLALQVK+VF
Sbjct: 65 TIGPGGFERDICVNSPTGSGKTLSYALPIVQLLASRPVRCLRALVVLPTRDLALQVKDVF 124
Query: 410 NTIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDFSEELQSSVDILVATPG 589
+ IAPAVGLSVG AVGQSSIA EIS+LIK PKL+AGICYDP+D S+ L+S+VDILVATPG
Sbjct: 125 DAIAPAVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPDDLSQNLESAVDILVATPG 184
Query: 590 RLMDHINNTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLQLTRSIDGSLFPHAKIFLP 769
RLMDHINNTKGFTLEHL YLVVDETDRLLREAYQSWLPTVLQLT++ D SLFP F+P
Sbjct: 185 RLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDSLFPSFTPFVP 244
Query: 770 TAFGSIKTTRRTGVERGFKGKPYPRLTKMILSATLTQDPSKLSQLELHHPLFLTSGQMRY 949
+AFGS++T RR VERGFKGKPYPRL KM+LSATLTQDPSKL QL+LHHPLF+T+G RY
Sbjct: 245 SAFGSLQTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGGSRY 304
Query: 950 QFPEQMQLLKVICEPNCKPLYLVALLQSLHGEKSIVFTSSVDSTHRLCALLKFFGDLNIK 1129
+ PE+++ L++ICE KP+YLVALL+S GEK I+FTSSV++T RLC LL FFGD IK
Sbjct: 305 RLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDPKIK 364
Query: 1130 INEYSGVQRQAVRSKTLKAFRTGEVQVLVSSDAMTRGMDVEGVRNVINYDTPPYIKTFIH 1309
EYSG Q++RSK LKAFR G++QVLV+SDA+TRGMDV+GV NVINYD PP+ KTFIH
Sbjct: 365 AKEYSGGLNQSLRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKTFIH 424
Query: 1310 XXXXXXXXXXXXXCFTLLHNDEDRRFKKILRKADNNSCSRHSVTPDSLEPLRSVYASALT 1489
CFTLL N E RRF K+L K ++SC + + P SL+ +R+ Y AL
Sbjct: 425 RAGRTARAGQAGRCFTLLSNHEVRRFSKLLEKVGSDSCPIYPIPPTSLDSIRATYTPALE 484
Query: 1490 KLKESVESETYKKRKAGMR 1546
KLKE VESE KK + R
Sbjct: 485 KLKELVESEAPKKGRQAFR 503
>ref|XP_002870205.1| hypothetical protein ARALYDRAFT_493299 [Arabidopsis lyrata subsp.
lyrata] gi|297316041|gb|EFH46464.1| hypothetical protein
ARALYDRAFT_493299 [Arabidopsis lyrata subsp. lyrata]
Length = 522
Score = 671 bits (1730), Expect = 0.0
Identities = 335/502 (66%), Positives = 399/502 (79%), Gaps = 1/502 (0%)
Frame = +2
Query: 44 GHEEEKKNNIP-VLPWMRSPVDVDSIPKCPLDEVPLLDSKLTAALQTSGIASLFPVQLAV 220
G ++E K I V+PWMR+PVDV ++ C L+ +P L+ KL AL+ GI+SLFPVQ+AV
Sbjct: 2 GRDKEDKTEIDSVVPWMRAPVDVSNVENCALETLPCLNPKLKKALENMGISSLFPVQVAV 61
Query: 221 WQETIGPGSFERDLCINSPTGSGKTLAYALPIVQMLSTRSVKYLRALVVLPTRDLALQVK 400
W ETIGPG FERD+C+NSPTGSGKTL+YALPIVQ+L++R V+ LRALVVLPTRDLALQVK
Sbjct: 62 WHETIGPGGFERDICVNSPTGSGKTLSYALPIVQILASRPVRCLRALVVLPTRDLALQVK 121
Query: 401 EVFNTIAPAVGLSVGLAVGQSSIADEISELIKRPKLEAGICYDPEDFSEELQSSVDILVA 580
+VF+ IAP VGLSVG AVGQSSIA EIS+LIK PKL+AGICYDPED S+ +S+VDILVA
Sbjct: 122 DVFDAIAPTVGLSVGSAVGQSSIAGEISQLIKTPKLDAGICYDPEDLSQNFESAVDILVA 181
Query: 581 TPGRLMDHINNTKGFTLEHLCYLVVDETDRLLREAYQSWLPTVLQLTRSIDGSLFPHAKI 760
TPGRLMDHINNTKGFTLEHL YLVVDETDRLLREAYQSWLPTVLQLT++ D LFP
Sbjct: 182 TPGRLMDHINNTKGFTLEHLRYLVVDETDRLLREAYQSWLPTVLQLTQTSDDGLFPSCTP 241
Query: 761 FLPTAFGSIKTTRRTGVERGFKGKPYPRLTKMILSATLTQDPSKLSQLELHHPLFLTSGQ 940
F+P+AFGS++T RR VERGFKGKPYPRL KM+LSATLTQDPSKL QL+LHHPLF+T+G
Sbjct: 242 FVPSAFGSLRTVRRQSVERGFKGKPYPRLVKMVLSATLTQDPSKLIQLDLHHPLFMTTGG 301
Query: 941 MRYQFPEQMQLLKVICEPNCKPLYLVALLQSLHGEKSIVFTSSVDSTHRLCALLKFFGDL 1120
RY+ PE+++ L++ICE KP+YLVALL+S GEK I+FTSSV++T RLC LL FFGD
Sbjct: 302 SRYRLPEKLECLRLICETGMKPVYLVALLKSWEGEKCIIFTSSVETTRRLCKLLNFFGDP 361
Query: 1121 NIKINEYSGVQRQAVRSKTLKAFRTGEVQVLVSSDAMTRGMDVEGVRNVINYDTPPYIKT 1300
IK EYSG Q+VRSK LKAFR G++QVLV+SDA+TRGMDV+GV NVINYD PP+ KT
Sbjct: 362 KIKAKEYSGGLNQSVRSKELKAFRKGDIQVLVASDALTRGMDVKGVTNVINYDMPPFAKT 421
Query: 1301 FIHXXXXXXXXXXXXXCFTLLHNDEDRRFKKILRKADNNSCSRHSVTPDSLEPLRSVYAS 1480
FIH CFTLL N E RRF K+L+K ++SC + + P SL+ +R+ Y
Sbjct: 422 FIHRAGRTARAGQAGRCFTLLSNHEVRRFSKLLKKVGSDSCPIYPIPPTSLDSIRATYTP 481
Query: 1481 ALTKLKESVESETYKKRKAGMR 1546
AL KLKE VESE KK + R
Sbjct: 482 ALEKLKELVESEAPKKGRQAFR 503