BLASTX nr result

ID: Cnidium21_contig00014136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014136
         (904 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vin...   426   e-117
emb|CBI18184.3| unnamed protein product [Vitis vinifera]              426   e-117
gb|ABK93472.1| unknown [Populus trichocarpa]                          408   e-111
ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max]   401   e-109
ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109

>ref|XP_002267236.1| PREDICTED: 5'-3' exonuclease-like [Vitis vinifera]
          Length = 366

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/277 (75%), Positives = 239/277 (86%), Gaps = 1/277 (0%)
 Frame = +2

Query: 2   NPLCYKGSTPSLQAFAHWVSLFFSQVSINDPVIAVIDGERGNEYRRQILPSYKAHRRQFV 181
           NPLCY GSTPSL +F HWVSLFF QVS++DPVIAVIDGER NEYR+++LPSYKAHRR+F 
Sbjct: 77  NPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLPSYKAHRRKFS 136

Query: 182 QPLSPLQNCGKSSIGK-HQLILDVLTKCNVPVVRIESNEADDVVATLVGQVLERGYRVVI 358
           + L P Q     S G+  Q++ DVL KCNVPV++IE  EADDVVATLVGQVL+RGYRVVI
Sbjct: 137 KQL-PSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQVLQRGYRVVI 195

Query: 359 ASPDKDFKQLISEDVQIVMPMPELNRWSFYTLKHYVAQYKCDPRSDLSLRCIMGDEVDGV 538
           ASPDKDFKQLISE+VQIVMPMPE  RWSFYTLKHY+AQY CDP SDLSLRCIMGDEVDGV
Sbjct: 196 ASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRCIMGDEVDGV 255

Query: 539 PGIQQMVPGFGRKTAIKLLKKHGSLENLLSVAAVRTIGRPYAQEALLNYADYLRKNYEVL 718
           PGIQ + PGFGRKTA+KLLKKHGSLENLL+ AAVRT+GR YAQ AL  YAD+LR+NYE+L
Sbjct: 256 PGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYADFLRRNYEIL 315

Query: 719 ALRRDVNVHLQEEWLSERDVKNDAESLSNFIKLVGET 829
           +LRRDV+V L+EEWL +RD +ND+  LSNF KL+GET
Sbjct: 316 SLRRDVDVQLEEEWLFDRDSRNDSVVLSNFFKLLGET 352


>emb|CBI18184.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/277 (75%), Positives = 239/277 (86%), Gaps = 1/277 (0%)
 Frame = +2

Query: 2   NPLCYKGSTPSLQAFAHWVSLFFSQVSINDPVIAVIDGERGNEYRRQILPSYKAHRRQFV 181
           NPLCY GSTPSL +F HWVSLFF QVS++DPVIAVIDGER NEYR+++LPSYKAHRR+F 
Sbjct: 91  NPLCYTGSTPSLHSFGHWVSLFFQQVSLSDPVIAVIDGERCNEYRQKLLPSYKAHRRKFS 150

Query: 182 QPLSPLQNCGKSSIGK-HQLILDVLTKCNVPVVRIESNEADDVVATLVGQVLERGYRVVI 358
           + L P Q     S G+  Q++ DVL KCNVPV++IE  EADDVVATLVGQVL+RGYRVVI
Sbjct: 151 KQL-PSQRFSSVSAGRSRQVVRDVLRKCNVPVLKIEGCEADDVVATLVGQVLQRGYRVVI 209

Query: 359 ASPDKDFKQLISEDVQIVMPMPELNRWSFYTLKHYVAQYKCDPRSDLSLRCIMGDEVDGV 538
           ASPDKDFKQLISE+VQIVMPMPE  RWSFYTLKHY+AQY CDP SDLSLRCIMGDEVDGV
Sbjct: 210 ASPDKDFKQLISEEVQIVMPMPEFGRWSFYTLKHYIAQYNCDPCSDLSLRCIMGDEVDGV 269

Query: 539 PGIQQMVPGFGRKTAIKLLKKHGSLENLLSVAAVRTIGRPYAQEALLNYADYLRKNYEVL 718
           PGIQ + PGFGRKTA+KLLKKHGSLENLL+ AAVRT+GR YAQ AL  YAD+LR+NYE+L
Sbjct: 270 PGIQHVAPGFGRKTALKLLKKHGSLENLLNAAAVRTVGRQYAQNALTKYADFLRRNYEIL 329

Query: 719 ALRRDVNVHLQEEWLSERDVKNDAESLSNFIKLVGET 829
           +LRRDV+V L+EEWL +RD +ND+  LSNF KL+GET
Sbjct: 330 SLRRDVDVQLEEEWLFDRDSRNDSVVLSNFFKLLGET 366


>gb|ABK93472.1| unknown [Populus trichocarpa]
          Length = 375

 Score =  408 bits (1048), Expect = e-111
 Identities = 197/276 (71%), Positives = 236/276 (85%)
 Frame = +2

Query: 2   NPLCYKGSTPSLQAFAHWVSLFFSQVSINDPVIAVIDGERGNEYRRQILPSYKAHRRQFV 181
           NPLCY GSTPSL +FAHW+SLFFSQVS+ DPVIAV+DG+ G+E+RRQ+LPSYKAHRR+F 
Sbjct: 89  NPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAVLDGDGGSEHRRQLLPSYKAHRRKFS 148

Query: 182 QPLSPLQNCGKSSIGKHQLILDVLTKCNVPVVRIESNEADDVVATLVGQVLERGYRVVIA 361
           +  S  Q   K    +  +++DVLTKCNVPVV+IE +EADDVVATL GQVL+ G++VVIA
Sbjct: 149 RKSSAPQ---KYPAERSHVVMDVLTKCNVPVVKIEGHEADDVVATLAGQVLQNGHKVVIA 205

Query: 362 SPDKDFKQLISEDVQIVMPMPELNRWSFYTLKHYVAQYKCDPRSDLSLRCIMGDEVDGVP 541
           SPDKDFKQLISEDVQIV+P+ ELNRWSFYTLKHY++QY CDP SDLS RCIMGDEVDGVP
Sbjct: 206 SPDKDFKQLISEDVQIVLPIAELNRWSFYTLKHYISQYNCDPCSDLSFRCIMGDEVDGVP 265

Query: 542 GIQQMVPGFGRKTAIKLLKKHGSLENLLSVAAVRTIGRPYAQEALLNYADYLRKNYEVLA 721
           GIQ + PGFGRKTA+KLLKKHGSL+NLL  AAVRT+G+ YAQ+AL  ++DYLR+NYE+LA
Sbjct: 266 GIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAVRTVGKKYAQDALTKHSDYLRRNYEILA 325

Query: 722 LRRDVNVHLQEEWLSERDVKNDAESLSNFIKLVGET 829
           LRRDV+V L+EEWL ERD  ND+  LSNF KL+ ++
Sbjct: 326 LRRDVDVQLKEEWLVERDRCNDSIILSNFFKLLEQS 361


>ref|XP_003548949.1| PREDICTED: 5'-3' exonuclease-like [Glycine max]
          Length = 368

 Score =  401 bits (1030), Expect = e-109
 Identities = 193/279 (69%), Positives = 233/279 (83%), Gaps = 1/279 (0%)
 Frame = +2

Query: 2   NPLCYKGSTPSLQAFAHWVSLFFSQVSINDPVIAVIDGERGNEYRRQILPSYKAHRRQFV 181
           NPLCY+GS PSL +   W+SLF  QVS  DPVIAVIDGERG+E+RR++LPSYKAHRR+F 
Sbjct: 78  NPLCYEGSKPSLHSLGRWLSLFLEQVSHTDPVIAVIDGERGSEHRRKLLPSYKAHRRKFT 137

Query: 182 QPLSPLQNCGKSSIGKH-QLILDVLTKCNVPVVRIESNEADDVVATLVGQVLERGYRVVI 358
           + +S LQ      +G+  Q+I DVL KCNVPV++++ +EADDVVATL GQVL +G+RVVI
Sbjct: 138 RHISSLQRFSSGHVGRSLQVINDVLGKCNVPVIKVDGHEADDVVATLAGQVLNKGFRVVI 197

Query: 359 ASPDKDFKQLISEDVQIVMPMPELNRWSFYTLKHYVAQYKCDPRSDLSLRCIMGDEVDGV 538
           ASPDKDFKQLIS+DVQIVMP+PEL RWSFYTL+HY  QY CDP SDLSLRCI+GDEVDGV
Sbjct: 198 ASPDKDFKQLISDDVQIVMPLPELQRWSFYTLRHYRDQYNCDPESDLSLRCIVGDEVDGV 257

Query: 539 PGIQQMVPGFGRKTAIKLLKKHGSLENLLSVAAVRTIGRPYAQEALLNYADYLRKNYEVL 718
           PGIQ +VP FGRKTA+KL+KKHGSLE LL+ AA+RT+GRPYAQ+AL N+ADYLR+NYEVL
Sbjct: 258 PGIQHLVPSFGRKTALKLIKKHGSLETLLNAAAIRTVGRPYAQDALKNHADYLRRNYEVL 317

Query: 719 ALRRDVNVHLQEEWLSERDVKNDAESLSNFIKLVGETAQ 835
           AL+RDVNV L EEWL +RD +ND  +LS F K + E+ +
Sbjct: 318 ALKRDVNVQLIEEWLIKRDNRNDKIALSAFFKYLEESKE 356


>ref|XP_002327332.1| predicted protein [Populus trichocarpa] gi|222835702|gb|EEE74137.1|
           predicted protein [Populus trichocarpa]
          Length = 368

 Score =  400 bits (1028), Expect = e-109
 Identities = 196/277 (70%), Positives = 235/277 (84%), Gaps = 1/277 (0%)
 Frame = +2

Query: 2   NPLCYKGSTPSLQAFAHWVSLFFSQVSINDPVIAVIDGERGNEYRRQILPSYKAHRRQFV 181
           NPLCY GSTPSL +FAHW+SLFFSQVS+ DPVIAV+DG+ G+E+RRQ+LPSYKAHRR+F 
Sbjct: 81  NPLCYAGSTPSLHSFAHWISLFFSQVSLTDPVIAVLDGDGGSEHRRQLLPSYKAHRRKFS 140

Query: 182 QPLSPLQNCGKSSIGKHQLILDVLTKCNVPVVRIESNEADDVVATLVGQVLERGYRVVIA 361
           +  S  Q   K    +  +++DVLTKCNVPVV+IE +EADDVVATL GQVL+  ++VVIA
Sbjct: 141 RKSSAPQ---KYPAERSHVVMDVLTKCNVPVVKIEGHEADDVVATLAGQVLQNRHKVVIA 197

Query: 362 SPDKDFKQLISEDVQIVMPMPELNRWSFYTLKHYVAQYKCDPRSDLSLRCIMGDEVDGVP 541
           SPDKDFKQLISEDVQIV+P+ ELNRWSFYTLKHY++QY CDP SDLS RCIMGDEVDGVP
Sbjct: 198 SPDKDFKQLISEDVQIVLPIAELNRWSFYTLKHYISQYNCDPCSDLSFRCIMGDEVDGVP 257

Query: 542 GIQQMVPGFGRKTAIKLLKKHGSLENLLSVAAVRTIGRPYAQEALLNYADYLRKNYEVLA 721
           GIQ + PGFGRKTA+KLLKKHGSL+NLL  AAVRT+G+ YAQ+AL  ++DYLR+NYE+LA
Sbjct: 258 GIQNVAPGFGRKTALKLLKKHGSLQNLLDAAAVRTVGKKYAQDALTKHSDYLRRNYEILA 317

Query: 722 LRR-DVNVHLQEEWLSERDVKNDAESLSNFIKLVGET 829
           LRR DV+V L+EEWL ERD  ND+  LSNF KL+ ++
Sbjct: 318 LRRWDVDVQLKEEWLVERDRCNDSIILSNFFKLLEQS 354


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