BLASTX nr result

ID: Cnidium21_contig00014102 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014102
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332638.1| predicted protein [Populus trichocarpa] gi|2...    70   2e-10
ref|XP_002321495.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Gl...    67   1e-09
emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]    66   3e-09
ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vi...    66   3e-09

>ref|XP_002332638.1| predicted protein [Populus trichocarpa] gi|222832865|gb|EEE71342.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
 Frame = +3

Query: 6   FRPHNLVSIDMPSSKFKILWKGPMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKID 185
           F P  LV ++MP  + + LW    P+++L  L  L L GC  L  LP  +G +K+L ++D
Sbjct: 38  FFPEKLVQLEMPCCQLEQLWNEGQPLEKLKSLKSLNLHGCSGLASLPHSIGMLKSLDQLD 97

Query: 186 AS-WTPIEKLPDSITRLKELAELNLYFCEKLRKIPEQIG 299
            S  + +  LP++I  LK L  LNL  C +L  +P  IG
Sbjct: 98  LSGCSSLTSLPNNIDALKSLKSLNLSGCSRLASLPNSIG 136



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
 Frame = +3

Query: 72  PMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDAS-WTPIEKLPDSITRLKELAE 248
           P  I +L  L  L L GC  L  LP+ +G++K+LK +D S  + +  LPDSI  LK L  
Sbjct: 190 PDSIGELKCLKLLNLHGCSGLASLPDNIGELKSLKSLDLSGCSRLASLPDSIGELKCLIT 249

Query: 249 LNLYFCEKLRKIPEQIG 299
           LNL  C  L  +P++IG
Sbjct: 250 LNLTDCSGLTSLPDRIG 266


>ref|XP_002321495.1| predicted protein [Populus trichocarpa] gi|222868491|gb|EEF05622.1|
           predicted protein [Populus trichocarpa]
          Length = 767

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/77 (41%), Positives = 52/77 (67%)
 Frame = +3

Query: 72  PMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWTPIEKLPDSITRLKELAEL 251
           P  I +L+ L  L L+GC  +KRLP+ LG++ +LK++  + + +E+LPDS+  L  L +L
Sbjct: 181 PESIFRLTKLEKLSLNGCQFIKRLPKHLGNLSSLKELSLNQSAVEELPDSVGSLSNLEKL 240

Query: 252 NLYFCEKLRKIPEQIGN 302
           +L +C+ L  IPE +GN
Sbjct: 241 SLMWCQSLTAIPESVGN 257



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/77 (38%), Positives = 49/77 (63%)
 Frame = +3

Query: 72  PMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWTPIEKLPDSITRLKELAEL 251
           P  +  L  L  L LS C +LK LP+++G M +LK++    T I  LP+SI RL +L +L
Sbjct: 134 PSDVSGLKVLQNLNLSNCPNLKDLPQEIGSMYSLKQLLVDKTAISVLPESIFRLTKLEKL 193

Query: 252 NLYFCEKLRKIPEQIGN 302
           +L  C+ ++++P+ +GN
Sbjct: 194 SLNGCQFIKRLPKHLGN 210



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/94 (32%), Positives = 48/94 (51%)
 Frame = +3

Query: 21  LVSIDMPSSKFKILWKGPMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWTP 200
           L  + + SS  K L   P  I  L YL  L   GC  L +LP+ +G + ++ +++   T 
Sbjct: 261 LTEVSINSSAIKEL---PPAIGSLPYLKILSAGGCRSLSKLPDSIGGLASISELELDETS 317

Query: 201 IEKLPDSITRLKELAELNLYFCEKLRKIPEQIGN 302
           I  LP+ I  LK + +L +  C  L  +PE IG+
Sbjct: 318 ISHLPEQIGGLKMIEKLYMRKCTSLSSLPESIGS 351


>ref|XP_003530669.1| PREDICTED: TMV resistance protein N-like [Glycine max]
          Length = 1447

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 35/77 (45%), Positives = 48/77 (62%)
 Frame = +3

Query: 72  PMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWTPIEKLPDSITRLKELAEL 251
           P+ +  L  L  L+LSGC  LK LPE +G +K+LK + A  T I +LP SI RL +L  L
Sbjct: 733 PIDVSGLKQLESLFLSGCTKLKSLPENIGILKSLKALHADGTAITELPRSIFRLTKLERL 792

Query: 252 NLYFCEKLRKIPEQIGN 302
            L  C+ LR++P  IG+
Sbjct: 793 VLEGCKHLRRLPSSIGH 809



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 33/77 (42%), Positives = 47/77 (61%)
 Frame = +3

Query: 72   PMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWTPIEKLPDSITRLKELAEL 251
            P  I +L+ L  L L GC  L+RLP  +G + +LK++    + +E+LPDSI  L  L  L
Sbjct: 780  PRSIFRLTKLERLVLEGCKHLRRLPSSIGHLCSLKELSLYQSGLEELPDSIGSLNNLERL 839

Query: 252  NLYFCEKLRKIPEQIGN 302
            NL +CE L  IP+ IG+
Sbjct: 840  NLMWCESLTVIPDSIGS 856


>emb|CAN69078.1| hypothetical protein VITISV_004764 [Vitis vinifera]
          Length = 1478

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = +3

Query: 18   NLVSIDMPSSKFKILWKGPMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWT 197
            +L+ +D+  S+ K L + P  +  L  L  L LSGC  LK LPE +  MK+L+++    T
Sbjct: 765  SLLHLDL--SECKNLVEFPSDVSGLKNLXTLILSGCSKLKELPENISYMKSLRELLLDGT 822

Query: 198  PIEKLPDSITRLKELAELNLYFCEKLRKIPEQIG 299
             IEKLP+S+ RL  L  L+L  C+ L+++P  IG
Sbjct: 823  VIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIG 856


>ref|XP_002268358.2| PREDICTED: TMV resistance protein N-like [Vitis vinifera]
          Length = 1438

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 38/94 (40%), Positives = 57/94 (60%)
 Frame = +3

Query: 18  NLVSIDMPSSKFKILWKGPMPIKQLSYLGCLYLSGCLDLKRLPEQLGDMKALKKIDASWT 197
           +L+ +D+  S+ K L + P  +  L  L  L LSGC  LK LPE +  MK+L+++    T
Sbjct: 718 SLLHLDL--SECKNLVEFPSDVSGLKNLQTLILSGCSKLKELPENISYMKSLRELLLDGT 775

Query: 198 PIEKLPDSITRLKELAELNLYFCEKLRKIPEQIG 299
            IEKLP+S+ RL  L  L+L  C+ L+++P  IG
Sbjct: 776 VIEKLPESVLRLTRLERLSLNNCQSLKQLPTCIG 809


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