BLASTX nr result
ID: Cnidium21_contig00014063
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00014063
(729 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 72 3e-30
emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera] 68 3e-29
ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 61 4e-23
ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 59 4e-22
gb|ACU17851.1| unknown [Glycine max] 59 2e-21
>ref|XP_002277896.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Vitis
vinifera]
Length = 375
Score = 71.6 bits (174), Expect(3) = 3e-30
Identities = 37/74 (50%), Positives = 50/74 (67%)
Frame = +1
Query: 199 LEVNVGEEELTQDDEIPNTPIRADRDLGNPAGRDTIIEIVEVECHQIRRSVSMSNLCQAR 378
LE EEE+ +++ IP TP R DLGN RDTIIEI + QIRRS+S+ CQ R
Sbjct: 227 LERVAEEEEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSCQTR 286
Query: 379 VSIADIICMDQDEE 420
+S+ADI+ M++DE+
Sbjct: 287 LSVADILLMNEDED 300
Score = 61.6 bits (148), Expect(3) = 3e-30
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 3 LLSKCSHAFRVKCIDTWLTSHSNCPLCCANI 95
LL KCSHAF V+CIDTWL SHSNCPLC ANI
Sbjct: 157 LLPKCSHAFHVQCIDTWLKSHSNCPLCRANI 187
Score = 45.4 bits (106), Expect(3) = 3e-30
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 468 AIAEMTKIAHRNQVLHSVTSPIAVKRPFSGERFSFPKRGTEKNIAIP 608
A+ E++K +HRN+VLH V SP+++KR FS R F + ++ IP
Sbjct: 320 AVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHARGRDGIIP 366
>emb|CAN78205.1| hypothetical protein VITISV_014334 [Vitis vinifera]
Length = 1377
Score = 67.8 bits (164), Expect(3) = 3e-29
Identities = 36/74 (48%), Positives = 49/74 (66%)
Frame = +1
Query: 199 LEVNVGEEELTQDDEIPNTPIRADRDLGNPAGRDTIIEIVEVECHQIRRSVSMSNLCQAR 378
LE EEE+ +++ IP TP R DLGN RDTIIEI + QIRRS+S+ Q R
Sbjct: 1229 LERVAEEEEIMRNEVIPKTPSRVFSDLGNSEERDTIIEIRDEGEQQIRRSISLDYSXQTR 1288
Query: 379 VSIADIICMDQDEE 420
+S+ADI+ M++DE+
Sbjct: 1289 LSVADILLMNEDED 1302
Score = 61.6 bits (148), Expect(3) = 3e-29
Identities = 26/31 (83%), Positives = 27/31 (87%)
Frame = +3
Query: 3 LLSKCSHAFRVKCIDTWLTSHSNCPLCCANI 95
LL KCSHAF V+CIDTWL SHSNCPLC ANI
Sbjct: 1159 LLPKCSHAFHVQCIDTWLKSHSNCPLCRANI 1189
Score = 45.4 bits (106), Expect(3) = 3e-29
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +3
Query: 468 AIAEMTKIAHRNQVLHSVTSPIAVKRPFSGERFSFPKRGTEKNIAIP 608
A+ E++K +HRN+VLH V SP+++KR FS R F + ++ IP
Sbjct: 1322 AVGEISKYSHRNRVLHCVMSPVSMKRSFSSGRLLFTRHARGRDGIIP 1368
>ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus] gi|449532198|ref|XP_004173069.1| PREDICTED: E3
ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
Length = 373
Score = 61.2 bits (147), Expect(3) = 4e-23
Identities = 27/38 (71%), Positives = 30/38 (78%)
Frame = +3
Query: 3 LLSKCSHAFRVKCIDTWLTSHSNCPLCCANIFHPSAFS 116
LL KCSHAF ++CIDTWL SHSNCPLC ANI +A S
Sbjct: 159 LLPKCSHAFHLQCIDTWLKSHSNCPLCRANIISINAGS 196
Score = 51.6 bits (122), Expect(3) = 4e-23
Identities = 28/78 (35%), Positives = 46/78 (58%)
Frame = +1
Query: 184 N*YSRLEVNVGEEELTQDDEIPNTPIRADRDLGNPAGRDTIIEIVEVECHQIRRSVSMSN 363
N Y + ++ G+ +D + +RA DLGN RDTIIE+ + QIRRS+SM +
Sbjct: 220 NDYEAVSLDSGQSFSNEDGK---NSVRAFSDLGNLEKRDTIIELRDGRLQQIRRSISMDH 276
Query: 364 LCQARVSIADIICMDQDE 417
Q + IAD++ +++D+
Sbjct: 277 CSQNHIIIADVLRLNEDD 294
Score = 41.6 bits (96), Expect(3) = 4e-23
Identities = 18/48 (37%), Positives = 29/48 (60%)
Frame = +3
Query: 468 AIAEMTKIAHRNQVLHSVTSPIAVKRPFSGERFSFPKRGTEKNIAIPL 611
++ E ++ +HR ++LH V SP+++KR FS R S K G E P+
Sbjct: 313 SVGEDSRSSHRKRILHCVMSPVSMKRSFSSGRLSLTKHGREHRGIAPV 360
>ref|XP_003517045.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 364
Score = 58.9 bits (141), Expect(3) = 4e-22
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +3
Query: 3 LLSKCSHAFRVKCIDTWLTSHSNCPLCCANIFHPSAFSL 119
LL KCSHAF + CIDTWL SHS+CPLC A+IF +A +L
Sbjct: 157 LLPKCSHAFHLPCIDTWLKSHSSCPLCRASIFTFNAAAL 195
Score = 48.9 bits (115), Expect(3) = 4e-22
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 193 SRLEVNVGEEELTQDDEIPNTPIRADRDLGNPAGRDTIIEIVEVECHQIRRSVSMSNLCQ 372
S L+ GE LT + + +RA DLGN GR ++IEI + IRR+VSM + Q
Sbjct: 228 SELDAVEGEVTLTHGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQ 287
Query: 373 --ARVSIADIICMDQDEE 420
+ +SIAD++ ++Q+ E
Sbjct: 288 RGSGLSIADVLHVNQEHE 305
Score = 43.1 bits (100), Expect(3) = 4e-22
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = +3
Query: 477 EMTKIAHRNQVLHSVTSPIAVKRPFSGERFSFPKRGTEKNIAIPL 611
E +K ++R +VLH V SPIA+KR FS RFS + G + +P+
Sbjct: 320 ESSKSSYRRKVLHCVLSPIAMKRSFSSGRFSLSRNGRGRQWVLPV 364
>gb|ACU17851.1| unknown [Glycine max]
Length = 364
Score = 58.9 bits (141), Expect(3) = 2e-21
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +3
Query: 3 LLSKCSHAFRVKCIDTWLTSHSNCPLCCANIFHPSAFSL 119
LL KCSHAF + CIDTWL SHS+CPLC A+IF +A +L
Sbjct: 157 LLPKCSHAFHLPCIDTWLKSHSSCPLCRASIFTFNAAAL 195
Score = 48.9 bits (115), Expect(3) = 2e-21
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Frame = +1
Query: 193 SRLEVNVGEEELTQDDEIPNTPIRADRDLGNPAGRDTIIEIVEVECHQIRRSVSMSNLCQ 372
S L+ GE LT + + +RA DLGN GR ++IEI + IRR+VSM + Q
Sbjct: 228 SELDAVEGEVTLTHGGAVSKSALRALSDLGNLRGRHSVIEIRDEGYDSIRRTVSMDHSFQ 287
Query: 373 --ARVSIADIICMDQDEE 420
+ +SIAD++ ++Q+ E
Sbjct: 288 RGSGLSIADVLHVNQEHE 305
Score = 40.8 bits (94), Expect(3) = 2e-21
Identities = 19/45 (42%), Positives = 28/45 (62%)
Frame = +3
Query: 477 EMTKIAHRNQVLHSVTSPIAVKRPFSGERFSFPKRGTEKNIAIPL 611
E +K ++R +VLH V SPIA+KR F RFS + G + +P+
Sbjct: 320 ESSKSSYRRKVLHCVLSPIAMKRSFFSGRFSLSRNGRGRQWVLPV 364