BLASTX nr result

ID: Cnidium21_contig00014062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014062
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Rici...   301   2e-79
ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vit...   295   1e-77
ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|2...   283   3e-74
ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|2...   275   2e-71
dbj|BAB01805.1| unnamed protein product [Arabidopsis thaliana]        259   9e-67

>ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
           gi|223538562|gb|EEF40166.1| RING-H2 finger protein
           ATL1L, putative [Ricinus communis]
          Length = 223

 Score =  301 bits (771), Expect = 2e-79
 Identities = 146/223 (65%), Positives = 170/223 (76%)
 Frame = -3

Query: 870 ISTLTTATVVFQEVQSNFYSRKLLLHTPLYQQQVAASPPVSGNAHVASETYPGDNSFDSN 691
           ++T T+   +FQ+ Q +FYSR+LLLHTPLY    AA+PP  G +  ASE Y G+NSFD+N
Sbjct: 1   MTTSTSTAQLFQDFQGDFYSRRLLLHTPLYHSPTAAAPPAPGYSQEASEPYTGNNSFDAN 60

Query: 690 VVMVLSVLLCALICSLGLNSIVRCALRCSRLVAXXXXXXXSARLANTGIKKKALKTFPVV 511
           VVMVLSVLLCALICSLGLNSI+RCALRCS LVA       SA LANTG+K+KALKTFP V
Sbjct: 61  VVMVLSVLLCALICSLGLNSIIRCALRCSSLVASRSADNSSAGLANTGVKRKALKTFPTV 120

Query: 510 NYTADLKLPGLDAECVICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCL 331
           NY+ DL LPGLD EC ICLSEF PGERV++LPKCNHGFH+RCID+WL+SHSSCPTCR CL
Sbjct: 121 NYSTDLNLPGLDTECAICLSEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCL 180

Query: 330 IQTCQKIVGCXXXXXXXXXXXXXXXXXIRIAPLEPEGVARSYQ 202
           I+TCQKIVGC                 + IAPLEPE + RSY+
Sbjct: 181 IETCQKIVGC---SQTSSSDPPVQESIVNIAPLEPEALIRSYR 220


>ref|XP_002282494.1| PREDICTED: RING-H2 finger protein ATL78 [Vitis vinifera]
           gi|147833208|emb|CAN75293.1| hypothetical protein
           VITISV_042413 [Vitis vinifera]
          Length = 224

 Score =  295 bits (755), Expect = 1e-77
 Identities = 139/214 (64%), Positives = 166/214 (77%)
 Frame = -3

Query: 843 VFQEVQSNFYSRKLLLHTPLYQQQVAASPPVSGNAHVASETYPGDNSFDSNVVMVLSVLL 664
           +FQ++  +FYSR+LLLH+PL++    ASPP +GN+H +SE Y G NSFD+NVVMVLSVLL
Sbjct: 11  LFQDLVGDFYSRRLLLHSPLHESPATASPPATGNSHDSSEPYTGSNSFDTNVVMVLSVLL 70

Query: 663 CALICSLGLNSIVRCALRCSRLVAXXXXXXXSARLANTGIKKKALKTFPVVNYTADLKLP 484
           CALICSLGLNSI+RCALRCS LVA         RLANTG+KKKALKTFP +NY+A L LP
Sbjct: 71  CALICSLGLNSIIRCALRCSSLVASPGNSPS-TRLANTGVKKKALKTFPTLNYSAGLNLP 129

Query: 483 GLDAECVICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTCQKIVG 304
           GLD ECVICLS+F PGER+++LPKCNHGFH+RCID+WLNSHSSCPTCR CLI+TCQKI+G
Sbjct: 130 GLDTECVICLSDFTPGERIRILPKCNHGFHVRCIDKWLNSHSSCPTCRHCLIETCQKIIG 189

Query: 303 CXXXXXXXXXXXXXXXXXIRIAPLEPEGVARSYQ 202
           C                   I PLEPEG +R+Y+
Sbjct: 190 CSQASSSETPPPLQESMI--IVPLEPEGFSRNYR 221


>ref|XP_002298709.1| predicted protein [Populus trichocarpa] gi|222845967|gb|EEE83514.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  283 bits (725), Expect = 3e-74
 Identities = 140/226 (61%), Positives = 166/226 (73%), Gaps = 1/226 (0%)
 Frame = -3

Query: 876 MSISTLTTATVVFQEVQSNFYSRKLLLHTPLYQQQVAASPPVSGNAHVASETYPG-DNSF 700
           MS ST TT  + FQ    +FYSR+LLLHTPLYQ    A+PP  GN   +SETY   DNSF
Sbjct: 1   MSTSTSTTHQL-FQGFLGDFYSRRLLLHTPLYQSSNTATPPAPGNT-ASSETYTSTDNSF 58

Query: 699 DSNVVMVLSVLLCALICSLGLNSIVRCALRCSRLVAXXXXXXXSARLANTGIKKKALKTF 520
           D+NVVMVLS+LLCALICSLGLNSI+RCALRCS LVA       S + ANTG+K+KALKTF
Sbjct: 59  DANVVMVLSILLCALICSLGLNSIIRCALRCSNLVASESAANPSTQAANTGVKRKALKTF 118

Query: 519 PVVNYTADLKLPGLDAECVICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCR 340
           P+V Y+ DL LPGLD +CVICLSEF PGE V++LPKCNHGFH++CID+WL+SHSSCPTCR
Sbjct: 119 PIVKYSTDLNLPGLDTQCVICLSEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCR 178

Query: 339 QCLIQTCQKIVGCXXXXXXXXXXXXXXXXXIRIAPLEPEGVARSYQ 202
            CLI+TC+KI GC                 + I PLEPEG+  +Y+
Sbjct: 179 HCLIETCKKIAGCSQASTSGPTSLPVQEAIVSILPLEPEGLISNYR 224


>ref|XP_002331879.1| predicted protein [Populus trichocarpa] gi|222874628|gb|EEF11759.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  275 bits (702), Expect = 2e-71
 Identities = 131/223 (58%), Positives = 164/223 (73%)
 Frame = -3

Query: 870 ISTLTTATVVFQEVQSNFYSRKLLLHTPLYQQQVAASPPVSGNAHVASETYPGDNSFDSN 691
           +S  T+ T +FQ+   +FYSR+LLLH PLYQ    A+PP  GN+  +  +    +SFD+N
Sbjct: 1   MSASTSTTQLFQDFLGDFYSRRLLLHNPLYQSTNTATPPAPGNSAPSEPSTGTGSSFDAN 60

Query: 690 VVMVLSVLLCALICSLGLNSIVRCALRCSRLVAXXXXXXXSARLANTGIKKKALKTFPVV 511
           VVMVLSVLLCALICSLGLNSI+RCALRCS + A       S + ANTG+ ++ALK+FPVV
Sbjct: 61  VVMVLSVLLCALICSLGLNSIIRCALRCSNIAASESAANPSTQSANTGVNRRALKSFPVV 120

Query: 510 NYTADLKLPGLDAECVICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCL 331
           NY++DL LPGLD ECVICLSEF PGERV++LPKC+HGFH++CID+WL+SHSSCPTCR CL
Sbjct: 121 NYSSDLNLPGLDTECVICLSEFTPGERVRLLPKCHHGFHVKCIDKWLSSHSSCPTCRHCL 180

Query: 330 IQTCQKIVGCXXXXXXXXXXXXXXXXXIRIAPLEPEGVARSYQ 202
           I+TCQKI+GC                 + I PLEPEG+ R Y+
Sbjct: 181 IETCQKIIGC-SQASTSGTSLPVQETIVSILPLEPEGLIRDYR 222


>dbj|BAB01805.1| unnamed protein product [Arabidopsis thaliana]
          Length = 222

 Score =  259 bits (661), Expect = 9e-67
 Identities = 131/218 (60%), Positives = 161/218 (73%)
 Frame = -3

Query: 858 TTATVVFQEVQSNFYSRKLLLHTPLYQQQVAASPPVSGNAHVASETYPGDNSFDSNVVMV 679
           T  T +FQ+++ +FYSR+LLLHT  YQ   AASPP + +AH AS +Y    SFD+NVVMV
Sbjct: 10  TKPTELFQDIRGDFYSRRLLLHTA-YQPPTAASPPFA-DAHEASHSYQSHMSFDANVVMV 67

Query: 678 LSVLLCALICSLGLNSIVRCALRCSRLVAXXXXXXXSARLANTGIKKKALKTFPVVNYTA 499
           LSVLLCAL+CSLGL+SI+RCALR S L++       S RLANTG+K+KALK+F  V+YTA
Sbjct: 68  LSVLLCALVCSLGLHSIIRCALRYSNLLSSEASDEFSVRLANTGVKQKALKSFQTVSYTA 127

Query: 498 DLKLPGLDAECVICLSEFAPGERVKVLPKCNHGFHIRCIDRWLNSHSSCPTCRQCLIQTC 319
           +LKLPGLD EC ICLSEFA GERVK+LPKC+HGFH+RCID+WL+SHSSCPTCR CLIQTC
Sbjct: 128 ELKLPGLDTECAICLSEFASGERVKLLPKCHHGFHVRCIDKWLSSHSSCPTCRHCLIQTC 187

Query: 318 QKIVGCXXXXXXXXXXXXXXXXXIRIAPLEPEGVARSY 205
           +KI G                  + I+PL PE + R +
Sbjct: 188 KKIAG----YSETESSPNQPQQNVHISPLGPESLIRGF 221


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