BLASTX nr result

ID: Cnidium21_contig00014054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014054
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22452.3| unnamed protein product [Vitis vinifera]              588   e-166
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   588   e-166
ref|XP_002891547.1| predicted protein [Arabidopsis lyrata subsp....   568   e-159
ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   567   e-159
gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein fr...   566   e-159

>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  588 bits (1516), Expect = e-166
 Identities = 294/355 (82%), Positives = 320/355 (90%)
 Frame = +3

Query: 27   KMAAKNSDETSSSRPWQTYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEARKEA 206
            K  A+ S    S+RPWQ+Y TV+TNAKAGM+GVDKEKVQR VYEMSKGSKYFENE RKEA
Sbjct: 3    KAEAEPSASADSARPWQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEA 62

Query: 207  DMKVKIENMRLQYAKLTVSDISHYQKVVDKRILELEVTRDLSRIWLHIDMDAFYAAVETL 386
             ++ KI+NMR + AKL+ SDISHYQ V DKRILELE TRDLSRIWLH+DMDAFYAAVETL
Sbjct: 63   FIRQKIDNMRARCAKLSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETL 122

Query: 387  SNPSLKGKPMAVGGVSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPVDFKKYTHYS 566
             NPSL+G+PMAVGG+SMISTANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+YS
Sbjct: 123  DNPSLRGRPMAVGGMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYS 182

Query: 567  DLTRKVFQRYDQNFMAASLDEAYLDITEVCSKRGITGGEVAEELREIVYVETGLTCSAGV 746
            DLTRKVFQ+YD NFMAASLDEAYLDITEVC++R +T GE+AEELR  V+  TGLTCSAGV
Sbjct: 183  DLTRKVFQKYDPNFMAASLDEAYLDITEVCNERDLTSGEIAEELRTSVHEVTGLTCSAGV 242

Query: 747  APNRLLAKVCSDINKPNGQFILPNERIAVMTFISSLPIRKIGGIGKVTENILKEVFGITT 926
            APNRLLAKVCSDINKPNGQF+LP+ R+AVMTFISSLPIRKIGGIGKVTE+IL  VFGI T
Sbjct: 243  APNRLLAKVCSDINKPNGQFVLPSNRMAVMTFISSLPIRKIGGIGKVTEHILSGVFGINT 302

Query: 927  CEEMLQKSGSLCALFSRSSADFFLSVGLGLGGTDTPQVKFRKSISNERTFSATKD 1091
            CEEMLQK G LCALFSRSSADFFLSVGLGLG TDTPQV+FRKSISNERTFSAT D
Sbjct: 303  CEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTDTPQVRFRKSISNERTFSATDD 357


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  588 bits (1516), Expect = e-166
 Identities = 294/355 (82%), Positives = 320/355 (90%)
 Frame = +3

Query: 27   KMAAKNSDETSSSRPWQTYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEARKEA 206
            K  A+ S    S+RPWQ+Y TV+TNAKAGM+GVDKEKVQR VYEMSKGSKYFENE RKEA
Sbjct: 3    KAEAEPSASADSARPWQSYTTVYTNAKAGMDGVDKEKVQRTVYEMSKGSKYFENEERKEA 62

Query: 207  DMKVKIENMRLQYAKLTVSDISHYQKVVDKRILELEVTRDLSRIWLHIDMDAFYAAVETL 386
             ++ KI+NMR + AKL+ SDISHYQ V DKRILELE TRDLSRIWLH+DMDAFYAAVETL
Sbjct: 63   FIRQKIDNMRARCAKLSASDISHYQMVADKRILELEATRDLSRIWLHVDMDAFYAAVETL 122

Query: 387  SNPSLKGKPMAVGGVSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPVDFKKYTHYS 566
             NPSL+G+PMAVGG+SMISTANYEARKFGVRAAMPGFIARKLCPELIFVP DFKKYT+YS
Sbjct: 123  DNPSLRGRPMAVGGMSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPTDFKKYTYYS 182

Query: 567  DLTRKVFQRYDQNFMAASLDEAYLDITEVCSKRGITGGEVAEELREIVYVETGLTCSAGV 746
            DLTRKVFQ+YD NFMAASLDEAYLDITEVC++R +T GE+AEELR  V+  TGLTCSAGV
Sbjct: 183  DLTRKVFQKYDPNFMAASLDEAYLDITEVCNERDLTSGEIAEELRTSVHEVTGLTCSAGV 242

Query: 747  APNRLLAKVCSDINKPNGQFILPNERIAVMTFISSLPIRKIGGIGKVTENILKEVFGITT 926
            APNRLLAKVCSDINKPNGQF+LP+ R+AVMTFISSLPIRKIGGIGKVTE+IL  VFGI T
Sbjct: 243  APNRLLAKVCSDINKPNGQFVLPSNRMAVMTFISSLPIRKIGGIGKVTEHILSGVFGINT 302

Query: 927  CEEMLQKSGSLCALFSRSSADFFLSVGLGLGGTDTPQVKFRKSISNERTFSATKD 1091
            CEEMLQK G LCALFSRSSADFFLSVGLGLG TDTPQV+FRKSISNERTFSAT D
Sbjct: 303  CEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTDTPQVRFRKSISNERTFSATDD 357


>ref|XP_002891547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297337389|gb|EFH67806.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 636

 Score =  568 bits (1463), Expect = e-159
 Identities = 283/351 (80%), Positives = 318/351 (90%)
 Frame = +3

Query: 39   KNSDETSSSRPWQTYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEARKEADMKV 218
            ++S   +SSRPW++Y+T FTNAKAGMEGVDKEKVQRIVYEMSKGSK+F+NE RKEA MK 
Sbjct: 5    ESSSTNNSSRPWESYNTFFTNAKAGMEGVDKEKVQRIVYEMSKGSKFFQNEERKEALMKQ 64

Query: 219  KIENMRLQYAKLTVSDISHYQKVVDKRILELEVTRDLSRIWLHIDMDAFYAAVETLSNPS 398
            KIE+MR + AKL+ SD+S+Y KVVDKRILELE TRDLSRIWLH+DMDAFYAAVETLS+PS
Sbjct: 65   KIEHMRDRCAKLSSSDLSNYHKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDPS 124

Query: 399  LKGKPMAVGGVSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPVDFKKYTHYSDLTR 578
            LKGKPMAVGG+SMISTANYEARKFGVRAAMPGFIARKLCP+LIFVPVDF KYTHYSDLTR
Sbjct: 125  LKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTR 184

Query: 579  KVFQRYDQNFMAASLDEAYLDITEVCSKRGITGGEVAEELREIVYVETGLTCSAGVAPNR 758
            KVF+ YD +F+A SLDEAYLDITEVC +RG++GGE+AEELR  VY ETGLTCSAGVA NR
Sbjct: 185  KVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANR 244

Query: 759  LLAKVCSDINKPNGQFILPNERIAVMTFISSLPIRKIGGIGKVTENILKEVFGITTCEEM 938
            LLAKVCSDINKPNGQF+L N+R  VMTF+SSLP+RKIGGIGKVTE+ILK+  GI TCEEM
Sbjct: 245  LLAKVCSDINKPNGQFVLQNDRSTVMTFVSSLPVRKIGGIGKVTEHILKDALGIKTCEEM 304

Query: 939  LQKSGSLCALFSRSSADFFLSVGLGLGGTDTPQVKFRKSISNERTFSATKD 1091
            +QK   L ALFS+SSADFFLSVGLGLGGTDTPQV+ RKSIS+ERTF+AT D
Sbjct: 305  VQKGPLLYALFSQSSADFFLSVGLGLGGTDTPQVRSRKSISSERTFAATGD 355


>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
            gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
            polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  567 bits (1462), Expect = e-159
 Identities = 278/344 (80%), Positives = 311/344 (90%)
 Frame = +3

Query: 60   SSRPWQTYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEARKEADMKVKIENMRL 239
            + RPWQ+YHTV+TNAKAGMEGVDKE+VQRIVYEMSKGSKYFENE RKEA ++ KIENMR 
Sbjct: 10   ADRPWQSYHTVYTNAKAGMEGVDKERVQRIVYEMSKGSKYFENEERKEATIREKIENMRA 69

Query: 240  QYAKLTVSDISHYQKVVDKRILELEVTRDLSRIWLHIDMDAFYAAVETLSNPSLKGKPMA 419
            + A+LT +D+S YQKV DKRILELE TRDLSRIWLH+DMDAFYAAVETLSNP LKGKPMA
Sbjct: 70   RCAQLTATDLSQYQKVADKRILELESTRDLSRIWLHVDMDAFYAAVETLSNPLLKGKPMA 129

Query: 420  VGGVSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPVDFKKYTHYSDLTRKVFQRYD 599
            VG +SM+STANYEARK+GVRAAMPGFIAR+LCPELI VP +F KY +YSDLTRKVF RYD
Sbjct: 130  VGSMSMLSTANYEARKYGVRAAMPGFIARRLCPELILVPTNFDKYNYYSDLTRKVFHRYD 189

Query: 600  QNFMAASLDEAYLDITEVCSKRGITGGEVAEELREIVYVETGLTCSAGVAPNRLLAKVCS 779
             NF+AASLDEAYLDITEVC +RG+T  E+A++LR  ++ ETGLTCSAGVA NRLLAKVCS
Sbjct: 190  PNFLAASLDEAYLDITEVCKERGLTSEEIAKDLRTSIFEETGLTCSAGVAANRLLAKVCS 249

Query: 780  DINKPNGQFILPNERIAVMTFISSLPIRKIGGIGKVTENILKEVFGITTCEEMLQKSGSL 959
            DINKPNGQFILPN+R A++TFISSLPIRKIGGIGKVTE+ILK+  GI TCEEMLQK G L
Sbjct: 250  DINKPNGQFILPNDRRAIVTFISSLPIRKIGGIGKVTEHILKDALGINTCEEMLQKGGHL 309

Query: 960  CALFSRSSADFFLSVGLGLGGTDTPQVKFRKSISNERTFSATKD 1091
            CALFS+SSADFFLSVGLGLG TDTPQV+FRKSISNERTF+AT D
Sbjct: 310  CALFSQSSADFFLSVGLGLGSTDTPQVRFRKSISNERTFAATTD 353


>gb|AAF76444.1|AC015445_11 Contains similarity to DINP protein from Homo sapiens gb|AF194973 and
            contains an IMS PF|00817 domain [Arabidopsis thaliana]
          Length = 435

 Score =  566 bits (1459), Expect = e-159
 Identities = 281/351 (80%), Positives = 318/351 (90%)
 Frame = +3

Query: 39   KNSDETSSSRPWQTYHTVFTNAKAGMEGVDKEKVQRIVYEMSKGSKYFENEARKEADMKV 218
            ++S   +SSRPW++Y+TVFTNAKAGMEGVDKEKVQR+VYEMSKGSKYF+NE RKEA MK 
Sbjct: 5    ESSSTNNSSRPWESYNTVFTNAKAGMEGVDKEKVQRVVYEMSKGSKYFQNEERKEALMKQ 64

Query: 219  KIENMRLQYAKLTVSDISHYQKVVDKRILELEVTRDLSRIWLHIDMDAFYAAVETLSNPS 398
            KIE+MR + AKL+  D+S+YQKVVDKRILELE TRDLSRIWLH+DMDAFYAAVETLS+PS
Sbjct: 65   KIEHMRDRCAKLSSLDLSNYQKVVDKRILELEATRDLSRIWLHVDMDAFYAAVETLSDPS 124

Query: 399  LKGKPMAVGGVSMISTANYEARKFGVRAAMPGFIARKLCPELIFVPVDFKKYTHYSDLTR 578
            +KGKPMAVGG+SMISTANYEARKFGVRAAMPGFIARKLCP+LIFVPVDF KYTHYSDLTR
Sbjct: 125  IKGKPMAVGGLSMISTANYEARKFGVRAAMPGFIARKLCPDLIFVPVDFTKYTHYSDLTR 184

Query: 579  KVFQRYDQNFMAASLDEAYLDITEVCSKRGITGGEVAEELREIVYVETGLTCSAGVAPNR 758
            KVF+ YD +F+A SLDEAYLDITEVC +RG++GGE+AEELR  VY ETGLTCSAGVA NR
Sbjct: 185  KVFRNYDPHFIAGSLDEAYLDITEVCRERGLSGGEIAEELRSSVYSETGLTCSAGVAANR 244

Query: 759  LLAKVCSDINKPNGQFILPNERIAVMTFISSLPIRKIGGIGKVTENILKEVFGITTCEEM 938
            LLAKVCSDINKPNGQF+L N+R  VMTF+S LP+RKIGGIGKVTE+ILK+  GI TCEEM
Sbjct: 245  LLAKVCSDINKPNGQFVLQNDRSTVMTFVSFLPVRKIGGIGKVTEHILKDALGIKTCEEM 304

Query: 939  LQKSGSLCALFSRSSADFFLSVGLGLGGTDTPQVKFRKSISNERTFSATKD 1091
            +QK   L ALFS+SSADFFLSVGLGLGGT+TPQV+ RKSIS+ERTF+AT D
Sbjct: 305  VQKGSLLYALFSQSSADFFLSVGLGLGGTNTPQVRSRKSISSERTFAATGD 355


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