BLASTX nr result

ID: Cnidium21_contig00014019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014019
         (1484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like ...   208   3e-51
ref|XP_002524216.1| zinc finger protein, putative [Ricinus commu...   195   3e-47
ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like ...   191   3e-46
ref|XP_002316267.1| predicted protein [Populus trichocarpa] gi|2...   189   1e-45
gb|AAB87123.1| hypothetical protein [Arabidopsis thaliana]            184   4e-44

>ref|XP_002277771.2| PREDICTED: poly(A) RNA polymerase GLD2-like [Vitis vinifera]
           gi|296086183|emb|CBI31624.3| unnamed protein product
           [Vitis vinifera]
          Length = 453

 Score =  208 bits (529), Expect = 3e-51
 Identities = 109/177 (61%), Positives = 129/177 (72%), Gaps = 3/177 (1%)
 Frame = +1

Query: 52  GTWRKLNLISNARVPILKLEHNLQNLSCDISINNLHGQMKSKLLFWISGIDGRFRELV-- 225
           G WRKL  I NARVPI+K E    N+SCD+SINNL GQMKSK LFWISGIDGRFR+LV  
Sbjct: 102 GGWRKLQFIPNARVPIIKFESYHPNISCDVSINNLKGQMKSKFLFWISGIDGRFRDLVLL 161

Query: 226 -KEWARAHDINESKSGFLSSYCLSLLIIFHFQTCIPAILPPLKELYPADMAHDLSGVRTD 402
            KEWARAHDIN SK+G L+SY LSLL++FH QTC PAILPPLKE+YP ++A DL GVR  
Sbjct: 162 VKEWARAHDINNSKTGTLNSYSLSLLVVFHLQTCRPAILPPLKEIYPGNVADDLIGVRAV 221

Query: 403 AEKQLEETCSVNIHMFRLKTSGQRNRSSLSDLICSFHSLIRDTKQANLRSRCSPKGI 573
            E Q+EET + NI+ F+   S   NRSSLS+L  SF +     K  ++ SR S +GI
Sbjct: 222 VEGQIEETSAANINRFKRDRSRAPNRSSLSELFISFLA-----KFVDITSRASEQGI 273


>ref|XP_002524216.1| zinc finger protein, putative [Ricinus communis]
           gi|223536493|gb|EEF38140.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 493

 Score =  195 bits (495), Expect = 3e-47
 Identities = 93/156 (59%), Positives = 120/156 (76%), Gaps = 3/156 (1%)
 Frame = +1

Query: 52  GTWRKLNLISNARVPILKLEHNLQNLSCDISINNLHGQMKSKLLFWISGIDGRFRE---L 222
           G WR+L  + NARVP+LK E   QN+SCD+SI+NL GQ+KS  LFW++ IDGRFR+   L
Sbjct: 102 GGWRRLQFVPNARVPLLKFESGRQNISCDVSIDNLQGQIKSNFLFWLNQIDGRFRDMVLL 161

Query: 223 VKEWARAHDINESKSGFLSSYCLSLLIIFHFQTCIPAILPPLKELYPADMAHDLSGVRTD 402
           VKEWA+AH+IN  K+G L+SY LSLL+IFHFQTC+PAILPPLKE+YP ++  DL+GVRT 
Sbjct: 162 VKEWAKAHNINNPKTGTLNSYSLSLLVIFHFQTCVPAILPPLKEIYPRNVVDDLTGVRTV 221

Query: 403 AEKQLEETCSVNIHMFRLKTSGQRNRSSLSDLICSF 510
           AE++++ETC+ NI  +        NRSSLS+L  SF
Sbjct: 222 AEERIKETCNANIARYMSDKYRAVNRSSLSELFISF 257


>ref|XP_004150639.1| PREDICTED: poly(A) RNA polymerase GLD2-like [Cucumis sativus]
           gi|449516431|ref|XP_004165250.1| PREDICTED: poly(A) RNA
           polymerase GLD2-like [Cucumis sativus]
          Length = 464

 Score =  191 bits (486), Expect = 3e-46
 Identities = 97/178 (54%), Positives = 128/178 (71%), Gaps = 3/178 (1%)
 Frame = +1

Query: 49  NGTWRKLNLISNARVPILKLEHNLQNLSCDISINNLHGQMKSKLLFWISGIDGRFRE--- 219
           NG W KL LI +ARVPILK+EH   N+SCDISI+NL GQ+KSK+L W++ IDGRF +   
Sbjct: 100 NGRWYKLQLIPHARVPILKIEHIQHNISCDISIDNLVGQIKSKILLWVNEIDGRFHDMVL 159

Query: 220 LVKEWARAHDINESKSGFLSSYCLSLLIIFHFQTCIPAILPPLKELYPADMAHDLSGVRT 399
           LVKEWA+AHDIN SK G  +SY LSLL+IFHFQTC PAI PPL+++YP ++  +L GVR 
Sbjct: 160 LVKEWAKAHDINNSKQGTFNSYSLSLLVIFHFQTCSPAIFPPLRDIYPGNVVDNLKGVRA 219

Query: 400 DAEKQLEETCSVNIHMFRLKTSGQRNRSSLSDLICSFHSLIRDTKQANLRSRCSPKGI 573
           + E ++  TC+ NI  F+ +T+   NRSSLS+L  SF +     K +++ S+ S  GI
Sbjct: 220 EVENEIARTCATNIARFKSRTA---NRSSLSELFVSFLA-----KFSDISSKASELGI 269


>ref|XP_002316267.1| predicted protein [Populus trichocarpa] gi|222865307|gb|EEF02438.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score =  189 bits (481), Expect = 1e-45
 Identities = 94/162 (58%), Positives = 122/162 (75%), Gaps = 3/162 (1%)
 Frame = +1

Query: 52  GTWRKLNLISNARVPILKLEHNLQNLSCDISINNLHGQMKSKLLFWISGIDGRFRE---L 222
           G W++L  I NARVPILK E+   ++SCD+SI+N+ G MKSK LFWI+ ID RFR+   L
Sbjct: 96  GGWQRLQFIPNARVPILKFEN--ASISCDVSIDNMQGLMKSKFLFWINEIDRRFRDMVLL 153

Query: 223 VKEWARAHDINESKSGFLSSYCLSLLIIFHFQTCIPAILPPLKELYPADMAHDLSGVRTD 402
           VKEWA+ H+IN  K+G L+SY LSLL+IFHFQTC+PAILPPLKE+YP ++  DL+GVRTD
Sbjct: 154 VKEWAKTHNINNPKTGSLNSYSLSLLVIFHFQTCVPAILPPLKEIYPRNVIDDLTGVRTD 213

Query: 403 AEKQLEETCSVNIHMFRLKTSGQRNRSSLSDLICSFHSLIRD 528
           AE+++ E C+ NI  +R   S   NR+SLS+L  SF + I D
Sbjct: 214 AERRIGEICAANISRYRSNKSRAINRNSLSELFISFLTKIED 255


>gb|AAB87123.1| hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score =  184 bits (468), Expect = 4e-44
 Identities = 92/197 (46%), Positives = 133/197 (67%), Gaps = 5/197 (2%)
 Frame = +1

Query: 49  NGTWRKLNLISNARVPILKLEHNLQNLSCDISINNLHGQMKSKLLFWISGIDGRFRELV- 225
           +G W KL  + +ARVPILK+    Q +SCDISI+NL G +KS+ LFWIS IDGRFR+LV 
Sbjct: 101 SGLWYKLQFVIHARVPILKVVSGHQRISCDISIDNLDGLLKSRFLFWISEIDGRFRDLVL 160

Query: 226 --KEWARAHDINESKSGFLSSYCLSLLIIFHFQTCIPAILPPLKELYPADMAHDLSGVRT 399
             KEWA+AH+IN+SK+G  +SY LSLL+IFHFQTC+PAILPPL+ +YP     DL+GVR 
Sbjct: 161 LVKEWAKAHNINDSKTGTFNSYSLSLLVIFHFQTCVPAILPPLRVIYPKSAVDDLTGVRK 220

Query: 400 DAEKQLEETCSVNIHMFRLKTSGQRNRSSLSDLICSFHSLIRD--TKQANLRSRCSPKGI 573
            AE+ + +  + NI  F+ + +   NRSSLS+L+ SF + + D   +  N     S + +
Sbjct: 221 TAEESIAQVTAANIARFKSERAKSVNRSSLSELLVSFFAKVEDPFEQPVNAARSVSRRNL 280

Query: 574 EKLMALIEKNDKEMESD 624
           +++  + +   + + S+
Sbjct: 281 DRIAQVFQITSRRLVSE 297


Top