BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00014008
         (2287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus...   363   1e-97
ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containi...   359   2e-96
ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containi...   356   2e-95
ref|XP_002881217.1| pentatricopeptide repeat-containing protein ...   337   6e-90
ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana] ...   333   1e-88

>ref|XP_002526061.1| multidrug resistance pump, putative [Ricinus communis]
            gi|223534642|gb|EEF36338.1| multidrug resistance pump,
            putative [Ricinus communis]
          Length = 589

 Score =  363 bits (932), Expect = 1e-97
 Identities = 207/403 (51%), Positives = 260/403 (64%), Gaps = 22/403 (5%)
 Frame = -1

Query: 2242 LVRLASFSPPLTKPSPLFAFLTKTPSF--FIHYIPILPPKPLHFHHSL--NPTLCFASRK 2075
            ++R +SF+P L + SPLF+F TK P F  F +    +    LH+H+ +   P     + +
Sbjct: 1    MLRGSSFAPSLNRASPLFSFFTKIPFFSSFQNNFHTIRRPFLHYHYYVFPKPVCNIQASR 60

Query: 2074 LPYNRFSQFCTSSALSNKP--FSSNA----PLSNKKMKKARRESPQGVLLHKLGACSKSK 1913
                R  QFC SSALS KP    S+A     +SNK  KKAR+ESP+GVL  K+  CSK  
Sbjct: 61   FCMERRVQFC-SSALSAKPQIHESSALAAKKVSNKAKKKARQESPEGVLRSKIDNCSKHG 119

Query: 1912 NLVEALQLYDEAKGNDVKLGVDHYNVLLYLCSLGLEGFVKLG------------VERGFE 1769
            NLVEAL+LYDEA+ N V+L   HYNVLLYLCS G    V+LG             +RGFE
Sbjct: 120  NLVEALRLYDEARINGVQLNQHHYNVLLYLCSSGSS--VELGGNGANEKASNMQFKRGFE 177

Query: 1768 IYKGMRVENVGPNEATFTSVARLAVMKEDPEMAFGLVKEMKSCGILPKLRSYGPALFGFC 1589
            I++ M ++ V PNEATFT+ ARLA+  EDPEMAF L+K+MK   ILPKLRSYGPALFGFC
Sbjct: 178  IFQQMVIDKVPPNEATFTNAARLAIAMEDPEMAFDLIKQMKCFDILPKLRSYGPALFGFC 237

Query: 1588 GKKMADKAYEVFAHMVELGVVAEEDEIRALLKVSVEVRNVEKVYEMLHRLRVTVRQXXXX 1409
             K MAD+AY V AHM E GV+ EE E+ ALLK+SV+++  +KVYEMLHRLR TVRQ    
Sbjct: 238  KKGMADRAYAVDAHMAESGVMPEEPELSALLKLSVDIKRADKVYEMLHRLRATVRQVTET 297

Query: 1408 XXXXXXEWFGSTSAAEVGEENWDVAKIKEXXXXXXXXXXXXXXXXXGEWKVVRTEMDETG 1229
                   WF S  A+++GEE WDV+K++E                 G+W+VVRT++D   
Sbjct: 298  TIDIIEAWFKSEDASKIGEEKWDVSKVREGVVRGGGGWHGQGWLGSGQWRVVRTQIDAKA 357

Query: 1228 VCQCCREKLVSIDIDPRETAKFSTSLTKLACEREVKAGFLQFQ 1100
            VC  C EKLV IDIDP ET  F+TSLT LAC+REVKA F++FQ
Sbjct: 358  VCNSCSEKLVCIDIDPSETENFATSLTNLACQREVKADFVRFQ 400


>ref|XP_002267905.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 526

 Score =  359 bits (922), Expect = 2e-96
 Identities = 196/326 (60%), Positives = 224/326 (68%), Gaps = 6/326 (1%)
 Frame = -1

Query: 2059 FSQFCTSSALSNKPFSSNAP--LSNKKMKKARRESPQGVLLHKLGACSKSKNLVEALQLY 1886
            FS    S+     P SS     +SNK  KKARRESP+GVL  KL  CSK  ++VEAL+LY
Sbjct: 7    FSNLALSATNKYIPESSAVAETMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLY 66

Query: 1885 DEAKGNDVKLGVDHYNVLLYLCSL----GLEGFVKLGVERGFEIYKGMRVENVGPNEATF 1718
            DEA+   V L   HYNVLLYLCS     G E  V L ++RGFEI+K M V+ + PNEATF
Sbjct: 67   DEARSRGVPLSQHHYNVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATF 126

Query: 1717 TSVARLAVMKEDPEMAFGLVKEMKSCGILPKLRSYGPALFGFCGKKMADKAYEVFAHMVE 1538
            TS ARLA   EDPEMAF LVK+MKSCGI PKLRSYGP LFGFC K  AD+AYEV AHM+E
Sbjct: 127  TSAARLACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDADRAYEVDAHMME 186

Query: 1537 LGVVAEEDEIRALLKVSVEVRNVEKVYEMLHRLRVTVRQXXXXXXXXXXEWFGSTSAAEV 1358
             GVVAEE E+ ALL +SVE R V++VYEM+HRLR +VRQ           WF S  AA V
Sbjct: 187  SGVVAEEPELCALLGLSVESRRVDRVYEMVHRLRASVRQVSESTAEVVERWFNSEDAAGV 246

Query: 1357 GEENWDVAKIKEXXXXXXXXXXXXXXXXXGEWKVVRTEMDETGVCQCCREKLVSIDIDPR 1178
            GEENWDV K++E                 G+WKVVRTEMDE GVCQ C EKLV IDIDPR
Sbjct: 247  GEENWDVGKVREGVVKGGGGWHGQGWLGKGKWKVVRTEMDEAGVCQSCGEKLVCIDIDPR 306

Query: 1177 ETAKFSTSLTKLACEREVKAGFLQFQ 1100
            ET  F++SLTKLAC+REVKA F+QFQ
Sbjct: 307  ETENFASSLTKLACQREVKADFVQFQ 332


>ref|XP_002269315.1| PREDICTED: pentatricopeptide repeat-containing protein At2g32230,
            mitochondrial-like [Vitis vinifera]
          Length = 895

 Score =  356 bits (913), Expect = 2e-95
 Identities = 208/383 (54%), Positives = 245/383 (63%), Gaps = 12/383 (3%)
 Frame = -1

Query: 2212 LTKPSPLFAFLTKTPSF-FIHYIPILPPKPLHFHHSLNPTLC--FASRKLPYNR---FSQ 2051
            LT+   L  F  KTP    + +  + P      HH   PT    +   ++  N+   FS 
Sbjct: 319  LTRARCLSFFFAKTPILCHVGHTRLRPLLHGCSHHHFKPTTYSPYIKDRIFMNKSAHFSN 378

Query: 2050 FCTSSALSNKPFSSNAP--LSNKKMKKARRESPQGVLLHKLGACSKSKNLVEALQLYDEA 1877
               S+     P SS A   +SNK  KKARRESP+GVL  KL  CSK  ++VEAL+LYDEA
Sbjct: 379  LALSATNKYIPESSAAAKTMSNKARKKARRESPEGVLRFKLDMCSKRGDVVEALRLYDEA 438

Query: 1876 KGNDVKLGVDHYNVLLYLCSL----GLEGFVKLGVERGFEIYKGMRVENVGPNEATFTSV 1709
            +   V L   +YNVLLYLCS     G E  V L ++RGFEI+K M V+ + PNEATFTS 
Sbjct: 439  RSLGVPLSQHNYNVLLYLCSCSGSNGDENVVNLALKRGFEIFKQMGVDGIEPNEATFTSA 498

Query: 1708 ARLAVMKEDPEMAFGLVKEMKSCGILPKLRSYGPALFGFCGKKMADKAYEVFAHMVELGV 1529
            ARLA   EDPEMAF LVK+MKSCGI PKLRSYGP LFGFC K  A++AYEV AHMVE GV
Sbjct: 499  ARLACAMEDPEMAFNLVKQMKSCGIPPKLRSYGPPLFGFCKKGDANRAYEVDAHMVESGV 558

Query: 1528 VAEEDEIRALLKVSVEVRNVEKVYEMLHRLRVTVRQXXXXXXXXXXEWFGSTSAAEVGEE 1349
            VAEE E+ ALL +SVE R V++VYEM+HRLR +VRQ           WF S  AA VGEE
Sbjct: 559  VAEEPELCALLGLSVESRWVDQVYEMMHRLRASVRQVSESTAEVVERWFNSEDAAGVGEE 618

Query: 1348 NWDVAKIKEXXXXXXXXXXXXXXXXXGEWKVVRTEMDETGVCQCCREKLVSIDIDPRETA 1169
            NWDV K++E                 G+WKV RTEMDE GVCQ C EKLV IDIDPRET 
Sbjct: 619  NWDVGKVREGVVKGGGGWHGQGWLGKGKWKVGRTEMDEAGVCQSCGEKLVGIDIDPRETE 678

Query: 1168 KFSTSLTKLACEREVKAGFLQFQ 1100
             F++SLTKLAC+REVKA F+QFQ
Sbjct: 679  NFASSLTKLACQREVKADFVQFQ 701


>ref|XP_002881217.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297327056|gb|EFH57476.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 572

 Score =  337 bits (865), Expect = 6e-90
 Identities = 195/387 (50%), Positives = 244/387 (63%), Gaps = 6/387 (1%)
 Frame = -1

Query: 2242 LVRLASFSPPLTKPS-PLFAFLTKTPSFFIHYIPILPPKPLHFHHSLNPTLCFASRKLPY 2066
            ++RL  F+P  ++   PLFA + K PS  IH+    P +   +H SL        R +  
Sbjct: 1    MLRLTCFTPCFSRACCPLFAMMLKVPSVHIHHPRFSPFRS--YHTSLLVKGTRDRRLILV 58

Query: 2065 NRFSQFCTS--SALSNKPFSSNAPLSNKKMKKARRESPQGVLLHKLGACSKSKNLVEALQ 1892
             R    CT   +A      S +  LS K  KKA ++SP+ +L  KL  CSK  +++EAL+
Sbjct: 59   ERSRHLCTMPLAAAKQSAASPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALR 118

Query: 1891 LYDEAKGNDVKLGVDHYNVLLYLCSLG---LEGFVKLGVERGFEIYKGMRVENVGPNEAT 1721
            LYDEA+ N V+L   HYNVLLY+CSL     E     G+ RGF+I+K M V+ V PNEAT
Sbjct: 119  LYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT 178

Query: 1720 FTSVARLAVMKEDPEMAFGLVKEMKSCGILPKLRSYGPALFGFCGKKMADKAYEVFAHMV 1541
            FT+ ARLAV K+DPEMAF +VK+MK+ GI P+LRSYGPALFGFC K  A KAYEV AHMV
Sbjct: 179  FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAGKAYEVDAHMV 238

Query: 1540 ELGVVAEEDEIRALLKVSVEVRNVEKVYEMLHRLRVTVRQXXXXXXXXXXEWFGSTSAAE 1361
            E  VV EE E+ ALLKVS++ +N +KVYEML RLR  VRQ          EWF S +AA+
Sbjct: 239  ESEVVPEEPELAALLKVSMDTKNADKVYEMLQRLRDLVRQVSKSTFDTIEEWFKSEAAAK 298

Query: 1360 VGEENWDVAKIKEXXXXXXXXXXXXXXXXXGEWKVVRTEMDETGVCQCCREKLVSIDIDP 1181
             G + WDV KI++                 G+W V RTEMDE GVC+CC+EKLV IDI+P
Sbjct: 299  AGVKKWDVKKIRDAVESGGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINP 358

Query: 1180 RETAKFSTSLTKLACEREVKAGFLQFQ 1100
             ET  F+ SLT+LACEREVKA F QFQ
Sbjct: 359  VETETFAASLTRLACEREVKANFNQFQ 385


>ref|NP_850186.1| proteinaceous RNase P 1 [Arabidopsis thaliana]
            gi|75115346|sp|Q66GI4.1|PRRP1_ARATH RecName:
            Full=Proteinaceous RNase P 1,
            chloroplastic/mitochondrial; AltName:
            Full=Pentatricopeptide repeat-containing protein
            At2g32230; Flags: Precursor gi|51536606|gb|AAU05541.1|
            At2g32230 [Arabidopsis thaliana]
            gi|330253558|gb|AEC08652.1| proteinaceous RNase P 1
            [Arabidopsis thaliana]
          Length = 572

 Score =  333 bits (854), Expect = 1e-88
 Identities = 192/387 (49%), Positives = 242/387 (62%), Gaps = 6/387 (1%)
 Frame = -1

Query: 2242 LVRLASFSPPLTKPS-PLFAFLTKTPSFFIHYIPILPPKPLHFHHSLNPTLCFASRKLPY 2066
            ++RL  F+P  ++   PLFA + K PS  +H+    P +   +H SL        R +  
Sbjct: 1    MLRLTCFTPSFSRACCPLFAMMLKVPSVHLHHPRFSPFR--FYHTSLLVKGTRDRRLILV 58

Query: 2065 NRFSQFCTS--SALSNKPFSSNAPLSNKKMKKARRESPQGVLLHKLGACSKSKNLVEALQ 1892
             R    CT   +A      S +  LS K  KKA ++SP+ +L  KL  CSK  +++EAL+
Sbjct: 59   ERSRHLCTLPLAAAKQSAASPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALR 118

Query: 1891 LYDEAKGNDVKLGVDHYNVLLYLCSLG---LEGFVKLGVERGFEIYKGMRVENVGPNEAT 1721
            LYDEA+ N V+L   HYNVLLY+CSL     E     G+ RGF+I+K M V+ V PNEAT
Sbjct: 119  LYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVVPNEAT 178

Query: 1720 FTSVARLAVMKEDPEMAFGLVKEMKSCGILPKLRSYGPALFGFCGKKMADKAYEVFAHMV 1541
            FT+ ARLAV K+DPEMAF +VK+MK+ GI P+LRSYGPALFGFC K  ADKAYEV AHMV
Sbjct: 179  FTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAHMV 238

Query: 1540 ELGVVAEEDEIRALLKVSVEVRNVEKVYEMLHRLRVTVRQXXXXXXXXXXEWFGSTSAAE 1361
            E  VV EE E+ ALLKVS++ +N +KVY+ L RLR  VRQ          EWF S  A +
Sbjct: 239  ESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATK 298

Query: 1360 VGEENWDVAKIKEXXXXXXXXXXXXXXXXXGEWKVVRTEMDETGVCQCCREKLVSIDIDP 1181
             G + WDV KI++                 G+W V RTEMDE GVC+CC+EKLV IDI+P
Sbjct: 299  TGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINP 358

Query: 1180 RETAKFSTSLTKLACEREVKAGFLQFQ 1100
             ET  F+ SLT+LACEREVKA F QFQ
Sbjct: 359  VETETFAASLTRLACEREVKANFNQFQ 385