BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013981
         (992 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]         247   3e-63
ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloro...   244   3e-62
gb|ABB97026.1| unknown [Brassica rapa]                                243   4e-62
sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, ...   243   7e-62
emb|CBI39707.3| unnamed protein product [Vitis vinifera]              243   7e-62

>gb|ABL97980.1| 30S ribosomal protein S10-like [Brassica rapa]
          Length = 193

 Score =  247 bits (631), Expect = 3e-63
 Identities = 128/178 (71%), Positives = 146/178 (82%), Gaps = 9/178 (5%)
 Frame = -2

Query: 808 SPTISSKPNISLFSFPPSNALK--FQSLTSSRPS--FTRVFSAPEVL-----DSSIEVEG 656
           +PT S++  +SL S  PS++      S   ++PS  FT+VF+APE L     D     E 
Sbjct: 16  NPTSSTRQKVSLLSLLPSSSTHGGIGSCVFNKPSVSFTKVFAAPETLTPETLDEPTSEEF 75

Query: 655 SESPETNSLSIDSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPT 476
           +E P ++S+S+D+DKMAPKQKIRIKLRSYWVPLIEDSCKQI+DAAR TNAKTMGPVPLPT
Sbjct: 76  AEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPT 135

Query: 475 KKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 302
           KKRIYCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 136 KKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 193


>ref|XP_004150471.1| PREDICTED: 30S ribosomal protein S10, chloroplastic-like [Cucumis
           sativus] gi|449519589|ref|XP_004166817.1| PREDICTED: 30S
           ribosomal protein S10, chloroplastic-like [Cucumis
           sativus]
          Length = 206

 Score =  244 bits (622), Expect = 3e-62
 Identities = 134/184 (72%), Positives = 143/184 (77%), Gaps = 19/184 (10%)
 Frame = -2

Query: 796 SSKPNISLFSFPPSNALKFQSLTSSRPSFTRVFSAPEVLDS-----------------SI 668
           SSKP    F    S ALK + L  S PS TR+++APEVLDS                 ++
Sbjct: 24  SSKPKFPPFPASSSTALKLKPLQFSFPS-TRLYAAPEVLDSPDTIEPPPEILEGSGVSTL 82

Query: 667 EVEGSESPETNSLSI--DSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMG 494
           E E  E P T++LSI  D DK+APKQKIRIKLRSYWVPLIEDSCKQIMDAAR TNAKTMG
Sbjct: 83  EGEDFEVPGTSALSIGEDVDKLAPKQKIRIKLRSYWVPLIEDSCKQIMDAARNTNAKTMG 142

Query: 493 PVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDV 314
           PVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDV
Sbjct: 143 PVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDV 202

Query: 313 EVKL 302
           EVKL
Sbjct: 203 EVKL 206


>gb|ABB97026.1| unknown [Brassica rapa]
          Length = 190

 Score =  243 bits (621), Expect = 4e-62
 Identities = 128/178 (71%), Positives = 148/178 (83%), Gaps = 5/178 (2%)
 Frame = -2

Query: 820 PLCNSPTISS--KPNISLFSFPPSNALKFQSLTSSRP-SFT-RVFSAPEVLD-SSIEVEG 656
           P  ++PT SS  +  +SL S  P++ +   SL +    SFT R+F+APE L   +++   
Sbjct: 13  PSFSNPTSSSSTRQKLSLLSLLPTHGVTGSSLINKPSVSFTKRIFAAPETLSPETLDEPV 72

Query: 655 SESPETNSLSIDSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPT 476
           SE P ++S+S+D+DKMAPKQKIRIKLRSYWVPLIEDSCKQI+DAAR TNAKTMGPVPLPT
Sbjct: 73  SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPT 132

Query: 475 KKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 302
           KKRIYCVLKSPHVHKDARFHFEIRTHQR+IDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 133 KKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 190


>sp|Q9M4Y3.1|RR10_MESCR RecName: Full=30S ribosomal protein S10, chloroplastic; Flags:
           Precursor gi|188036211|pdb|3BBN|J Chain J, Homology
           Model For The Spinach Chloroplast 30s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome.
           gi|7578929|gb|AAF64190.1|AF245665_1 plastid ribosomal
           protein S10 precursor [Mesembryanthemum crystallinum]
          Length = 197

 Score =  243 bits (619), Expect = 7e-62
 Identities = 133/182 (73%), Positives = 143/182 (78%), Gaps = 10/182 (5%)
 Frame = -2

Query: 817 LCNSPTISSKPNISLFSFPPS-----NALKFQSLTSSRPSFTRVFSAPEVLDSSI---EV 662
           L NS +  +KP +S  S   S       L   S +SS  S  RVF+APEVL+S     E 
Sbjct: 16  LSNSSSFPNKPQVSNLSLHSSLSNLRRTLSHSSPSSSSSSNVRVFAAPEVLESQETGPES 75

Query: 661 EGSESPETNSLSI--DSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPV 488
              E  ET++L I  DSD+MAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPV
Sbjct: 76  YVEEGSETSALGIGADSDQMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPV 135

Query: 487 PLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEV 308
           PLPTKKRI+CVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEV
Sbjct: 136 PLPTKKRIFCVLKSPHVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEV 195

Query: 307 KL 302
           KL
Sbjct: 196 KL 197


>emb|CBI39707.3| unnamed protein product [Vitis vinifera]
          Length = 200

 Score =  243 bits (619), Expect = 7e-62
 Identities = 129/167 (77%), Positives = 143/167 (85%), Gaps = 15/167 (8%)
 Frame = -2

Query: 757 SNALKFQSLTSSRPSFT--RVFSAPEVLDS-----------SIEVEGSESPETNSLS--I 623
           SNA  F SL + +PS +  RVF+APE+L S           +IEVEGSE+P  ++LS  +
Sbjct: 35  SNA-SFSSLKTLKPSLSSSRVFAAPELLSSQETPDGLEDSATIEVEGSETPGASALSMGV 93

Query: 622 DSDKMAPKQKIRIKLRSYWVPLIEDSCKQIMDAARTTNAKTMGPVPLPTKKRIYCVLKSP 443
           D+DKMAPKQKIRIKLRSYWVPLIEDSCKQIM+AARTTNAKTMGPVPLPTKK+I+CVLKSP
Sbjct: 94  DADKMAPKQKIRIKLRSYWVPLIEDSCKQIMEAARTTNAKTMGPVPLPTKKKIFCVLKSP 153

Query: 442 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 302
           HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL
Sbjct: 154 HVHKDARFHFEIRTHQRLIDILYPTAQTIDSLMQLDLPAGVDVEVKL 200