BLASTX nr result

ID: Cnidium21_contig00013968 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013968
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524809.1| elongation factor tu, putative [Ricinus comm...    44   1e-07
ref|XP_004136065.1| PREDICTED: elongation factor Tu, mitochondri...    44   7e-07
ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arab...    45   9e-07
ref|NP_192202.1| Elongation factor Tu [Arabidopsis thaliana] gi|...    44   1e-06
ref|NP_001242071.1| uncharacterized protein LOC100791600 [Glycin...    42   3e-06

>ref|XP_002524809.1| elongation factor tu, putative [Ricinus communis]
           gi|223535993|gb|EEF37652.1| elongation factor tu,
           putative [Ricinus communis]
          Length = 449

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = +1

Query: 49  EKPLLLFL*IKEKLNECGSVVTGRIERGTFKVG*EVEILGLRQG 180
           +KP L+ +     +   G+V TGR+E+GT KVG EVEILGL QG
Sbjct: 261 DKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEILGLMQG 304



 Score = 37.7 bits (86), Expect(2) = 1e-07
 Identities = 16/21 (76%), Positives = 19/21 (90%)
 Frame = +2

Query: 179 GAPVKTTLTGVDMFKKIWDSG 241
           GAP+KTT+TGV+MFKKI D G
Sbjct: 304 GAPLKTTVTGVEMFKKILDQG 324


>ref|XP_004136065.1| PREDICTED: elongation factor Tu, mitochondrial-like [Cucumis
           sativus] gi|449515049|ref|XP_004164562.1| PREDICTED:
           elongation factor Tu, mitochondrial-like [Cucumis
           sativus]
          Length = 450

 Score = 43.9 bits (102), Expect(2) = 7e-07
 Identities = 22/44 (50%), Positives = 30/44 (68%)
 Frame = +1

Query: 49  EKPLLLFL*IKEKLNECGSVVTGRIERGTFKVG*EVEILGLRQG 180
           +KP L+ +     +   G+V TGR+E+GT KVG EVE+LGL QG
Sbjct: 262 DKPFLMPIEDVFSIQGRGTVATGRVEQGTIKVGEEVEVLGLSQG 305



 Score = 35.8 bits (81), Expect(2) = 7e-07
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +2

Query: 179 GAPVKTTLTGVDMFKKIWDSG 241
           G P+KTT+TGV+MFKKI D G
Sbjct: 305 GPPLKTTVTGVEMFKKILDQG 325


>ref|XP_002872804.1| hypothetical protein ARALYDRAFT_490266 [Arabidopsis lyrata subsp.
           lyrata] gi|297318641|gb|EFH49063.1| hypothetical protein
           ARALYDRAFT_490266 [Arabidopsis lyrata subsp. lyrata]
          Length = 454

 Score = 44.7 bits (104), Expect(2) = 9e-07
 Identities = 21/27 (77%), Positives = 24/27 (88%)
 Frame = +1

Query: 100 GSVVTGRIERGTFKVG*EVEILGLRQG 180
           G+V TGRIE+GT KVG EVEILGLR+G
Sbjct: 282 GTVATGRIEQGTIKVGEEVEILGLREG 308



 Score = 34.7 bits (78), Expect(2) = 9e-07
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +2

Query: 179 GAPVKTTLTGVDMFKKIWDSG 241
           G P+K+T+TGV+MFKKI D+G
Sbjct: 309 GLPLKSTVTGVEMFKKILDNG 329


>ref|NP_192202.1| Elongation factor Tu [Arabidopsis thaliana]
           gi|25090254|sp|Q9ZT91.1|EFTM_ARATH RecName:
           Full=Elongation factor Tu, mitochondrial; Flags:
           Precursor gi|3924612|gb|AAC79113.1| mitochondrial
           elongation factor Tu [Arabidopsis thaliana]
           gi|4263511|gb|AAD15337.1| mitochondrial elongation
           factor Tu [Arabidopsis thaliana]
           gi|7269778|emb|CAB77778.1| mitochondrial elongation
           factor Tu [Arabidopsis thaliana]
           gi|22531166|gb|AAM97087.1| mitochondrial elongation
           factor Tu [Arabidopsis thaliana]
           gi|31376381|gb|AAP49517.1| At4g02930 [Arabidopsis
           thaliana] gi|110742332|dbj|BAE99090.1| mitochondrial
           elongation factor Tu [Arabidopsis thaliana]
           gi|332656852|gb|AEE82252.1| Elongation factor Tu
           [Arabidopsis thaliana]
          Length = 454

 Score = 43.9 bits (102), Expect(2) = 1e-06
 Identities = 23/44 (52%), Positives = 30/44 (68%)
 Frame = +1

Query: 49  EKPLLLFL*IKEKLNECGSVVTGRIERGTFKVG*EVEILGLRQG 180
           +KP L+ +     +   G+V TGRIE+G  KVG EVEILGLR+G
Sbjct: 265 DKPFLMPIEDVFSIQGRGTVATGRIEQGVIKVGEEVEILGLREG 308



 Score = 35.0 bits (79), Expect(2) = 1e-06
 Identities = 14/21 (66%), Positives = 19/21 (90%)
 Frame = +2

Query: 179 GAPVKTTLTGVDMFKKIWDSG 241
           G P+K+T+TGV+MFKKI D+G
Sbjct: 309 GVPLKSTVTGVEMFKKILDNG 329


>ref|NP_001242071.1| uncharacterized protein LOC100791600 [Glycine max]
           gi|255635840|gb|ACU18267.1| unknown [Glycine max]
          Length = 459

 Score = 41.6 bits (96), Expect(2) = 3e-06
 Identities = 21/44 (47%), Positives = 29/44 (65%)
 Frame = +1

Query: 49  EKPLLLFL*IKEKLNECGSVVTGRIERGTFKVG*EVEILGLRQG 180
           +KP L+ +     +   G+V TGR+E+G  KVG EVE+LGL QG
Sbjct: 266 DKPFLMPIEDVFSIQGRGTVATGRVEQGIIKVGDEVEVLGLMQG 309



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 15/21 (71%), Positives = 18/21 (85%)
 Frame = +2

Query: 179 GAPVKTTLTGVDMFKKIWDSG 241
           G P+KTT+TGV+MFKKI D G
Sbjct: 309 GGPLKTTVTGVEMFKKILDQG 329


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