BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013938
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   235   2e-59
emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]   235   2e-59
gb|ACT21194.1| zinc finger protein [Carica papaya]                    221   2e-55
sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligas...   216   8e-54
ref|XP_003620252.1| RING finger protein [Medicago truncatula] gi...   214   4e-53

>ref|XP_002267134.1| PREDICTED: E3 ubiquitin-protein ligase RING1 isoform 1 [Vitis
            vinifera] gi|359491811|ref|XP_003634328.1| PREDICTED: E3
            ubiquitin-protein ligase RING1 isoform 2 [Vitis vinifera]
          Length = 369

 Score =  235 bits (599), Expect = 2e-59
 Identities = 115/190 (60%), Positives = 134/190 (70%), Gaps = 28/190 (14%)
 Frame = -1

Query: 1090 FVVDGNN-NSTNLSGANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVEALPVVKI 914
            FV+DGN+   T     NLGDYFIGPGLEQLIQQLAENDPNRYGTPPA+KSA+E LP ++I
Sbjct: 146  FVIDGNSPEGTFRLSPNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRI 205

Query: 913  SQEMLGCDFSECAVCKESFGLDEEARQMPCKHIYHSDCIMPWLEMHNSCPVCRFELPTDD 734
            + E+LG D S+CAVCK+SF LDEEA+QMPCKHIYH+DCI+PWLE+HNSCPVCR+ELPTDD
Sbjct: 206  TVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDD 265

Query: 733  PEYENRARDG----------------------SGGAGGLQESSD-----TPRTMERRFRI 635
            P+YE+R R G                      SG AGG   S +     TPRT +R FRI
Sbjct: 266  PDYEHRTRGGQVNQTGGNAAAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRI 325

Query: 634  QLPWQVMTSG 605
              PW   T G
Sbjct: 326  SFPWPFRTFG 335


>emb|CAN79596.1| hypothetical protein VITISV_042386 [Vitis vinifera]
          Length = 371

 Score =  235 bits (599), Expect = 2e-59
 Identities = 115/190 (60%), Positives = 134/190 (70%), Gaps = 28/190 (14%)
 Frame = -1

Query: 1090 FVVDGNN-NSTNLSGANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVEALPVVKI 914
            FV+DGN+   T     NLGDYFIGPGLEQLIQQLAENDPNRYGTPPA+KSA+E LP ++I
Sbjct: 148  FVIDGNSPEGTFRLSPNLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEGLPTIRI 207

Query: 913  SQEMLGCDFSECAVCKESFGLDEEARQMPCKHIYHSDCIMPWLEMHNSCPVCRFELPTDD 734
            + E+LG D S+CAVCK+SF LDEEA+QMPCKHIYH+DCI+PWLE+HNSCPVCR+ELPTDD
Sbjct: 208  TVELLGTDSSQCAVCKDSFELDEEAKQMPCKHIYHNDCILPWLELHNSCPVCRYELPTDD 267

Query: 733  PEYENRARDG----------------------SGGAGGLQESSD-----TPRTMERRFRI 635
            P+YE+R R G                      SG AGG   S +     TPRT +R FRI
Sbjct: 268  PDYEHRTRGGQVNQTGGNAAAVAAAGAASNSASGAAGGAAVSGENPNPQTPRTADRMFRI 327

Query: 634  QLPWQVMTSG 605
              PW   T G
Sbjct: 328  SFPWPFRTFG 337


>gb|ACT21194.1| zinc finger protein [Carica papaya]
          Length = 340

 Score =  221 bits (564), Expect = 2e-55
 Identities = 109/186 (58%), Positives = 134/186 (72%), Gaps = 25/186 (13%)
 Frame = -1

Query: 1090 FVVDGNN-NSTNLSGA-------NLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVE 935
            FV++ N+   +  SGA       NLGDYF+GPGLEQLIQQLAENDPNR+GTPPA+KSA+E
Sbjct: 121  FVIENNSPGGSGPSGAFRLPGSLNLGDYFLGPGLEQLIQQLAENDPNRHGTPPASKSAIE 180

Query: 934  ALPVVKISQEMLGCDFSECAVCKESFGLDEEARQMPCKHIYHSDCIMPWLEMHNSCPVCR 755
            ALP +KI QEM   D S+CAVCK+SF L EEA+QMPCKHIYHS CI+PWLE+HNSCPVCR
Sbjct: 181  ALPTIKIFQEMPDSDSSQCAVCKDSFALAEEAKQMPCKHIYHSQCILPWLELHNSCPVCR 240

Query: 754  FELPTDDPEYENRARDG-----------------SGGAGGLQESSDTPRTMERRFRIQLP 626
            +ELPTDD +YE+R R                   + G  G +++ +TPR++ERRFRI LP
Sbjct: 241  YELPTDDADYEHRTRANRTPAQNVSGSTDAVNAVADGNAGNRDNPETPRSVERRFRIFLP 300

Query: 625  WQVMTS 608
            W   +S
Sbjct: 301  WPFRSS 306


>sp|P0CH30.1|RING1_GOSHI RecName: Full=E3 ubiquitin-protein ligase RING1; AltName: Full=RING
            finger protein 1 gi|298155591|gb|ADI58769.1| RING-type
            ubiquitin E3 ligase [Gossypium hirsutum]
          Length = 338

 Score =  216 bits (550), Expect = 8e-54
 Identities = 101/169 (59%), Positives = 121/169 (71%), Gaps = 7/169 (4%)
 Frame = -1

Query: 1090 FVVDGNNNSTNLS-GANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVEALPVVKI 914
            FV+  N +       AN+GDYFIGPGLEQLIQQLAENDPNRYGTPPA+KSA+EALP+V I
Sbjct: 153  FVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAIEALPLVNI 212

Query: 913  SQEMLGCDFSECAVCKESFGLDEEARQMPCKHIYHSDCIMPWLEMHNSCPVCRFELPTDD 734
            ++  L  +F++CAVC + F    EA+QMPCKH+YH DC++PWLE+HNSCPVCR ELPTDD
Sbjct: 213  TKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELHNSCPVCRHELPTDD 272

Query: 733  PEYENRARDGSGGAGGL------QESSDTPRTMERRFRIQLPWQVMTSG 605
            P+YE R R   G +GG       Q S    RT+ER FRI LPW     G
Sbjct: 273  PDYERRVRGAQGTSGGNDGDNSGQRSDGDNRTVERSFRISLPWPFQARG 321


>ref|XP_003620252.1| RING finger protein [Medicago truncatula] gi|355495267|gb|AES76470.1|
            RING finger protein [Medicago truncatula]
          Length = 340

 Score =  214 bits (544), Expect = 4e-53
 Identities = 97/145 (66%), Positives = 115/145 (79%), Gaps = 4/145 (2%)
 Frame = -1

Query: 1048 ANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVEALPVVKISQEMLGCDFSECAVC 869
            ANLGDYF GPGLE LIQQLAENDPNR GTPPA+KSAVE LPV++++ E+L  D S+CAVC
Sbjct: 145  ANLGDYFFGPGLEDLIQQLAENDPNRRGTPPASKSAVEKLPVIEVTGELLESDSSQCAVC 204

Query: 868  KESFGLDEEARQMPCKHIYHSDCIMPWLEMHNSCPVCRFELPTDDPEYENRARDGSGGAG 689
            K++F L E+A+QMPCKHIYH DCI+PWLE+HNSCPVCRFELPTDDP+YE RAR G GG G
Sbjct: 205  KDTFALGEKAKQMPCKHIYHDDCILPWLELHNSCPVCRFELPTDDPDYEQRARGGGGGGG 264

Query: 688  GLQESSDT----PRTMERRFRIQLP 626
            G      +      ++  RFR+ LP
Sbjct: 265  GAGNGGGSGGGGDDSVRTRFRVSLP 289