BLASTX nr result

ID: Cnidium21_contig00013924 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013924
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]         186   1e-45
ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Viti...   183   1e-44
emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]   183   1e-44
ref|XP_002305093.1| glutamate-gated kainate-type ion channel rec...   182   2e-44
ref|XP_002305094.1| glutamate-gated kainate-type ion channel rec...   181   7e-44

>dbj|BAL15047.1| glutamate receptor 1.2 [Solanum lycopersicum]
          Length = 925

 Score =  186 bits (473), Expect = 1e-45
 Identities = 89/157 (56%), Positives = 120/157 (76%), Gaps = 1/157 (0%)
 Frame = +1

Query: 7   IGVPGKTVYPKFVEVVPTGDDSDSVNIYGFCIDLFREVVNILEKNYSLPYEFIPFNGSYD 186
           IGVPG+T + KFV+V  T  +++ +   GFCIDLF+EV+ ILEKNY+LPY+F  ++GSY 
Sbjct: 448 IGVPGRTSFEKFVKV-ETVAETNEMKYTGFCIDLFKEVLKILEKNYTLPYDFEAYDGSYP 506

Query: 187 DLVFSVSNETFDALVGDVTILERRAKLVEFTQPFAESGLSMIVQYK-HKPTRAWLFLKPF 363
           DLV  V N  +DA+VGD+TIL  R K +EFTQPFAESGL+M+V  K  K  +AW+FLKPF
Sbjct: 507 DLVQQVINGRYDAIVGDITILAERTKYIEFTQPFAESGLTMVVPVKFDKSKKAWMFLKPF 566

Query: 364 SRSMWLATLGILLYTMFIVWFFERKSNPDFKGPFHDQ 474
           + +MW+AT  +L+YTM +VWF E +SNP+F+G + DQ
Sbjct: 567 TGNMWVATGSVLVYTMLVVWFMEHQSNPEFRGRWKDQ 603


>ref|XP_002272216.1| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 916

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/159 (54%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
 Frame = +1

Query: 1   MRIGVPGKTVYPKFVEVVPTGDDSDSVNIYGFCIDLFREVVNILEKNYSLPYEFIPFNGS 180
           ++IG+P  T + KFV+V     D +     GFCID+FREV+ ILE+NYSLPY+F P++G+
Sbjct: 459 LKIGIPANTSFDKFVKVDEAQIDPEK-KYTGFCIDIFREVIKILEQNYSLPYDFHPYDGT 517

Query: 181 YDDLVFSVSNETFDALVGDVTILERRAKLVEFTQPFAESGLSMIVQYKHKPT-RAWLFLK 357
           YD+LV  V  +T+DA+VGD+TIL  R+++VEFTQPFAESGLSMI   K +   +AWLF+K
Sbjct: 518 YDELVDRVYTKTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKSREAYKAWLFMK 577

Query: 358 PFSRSMWLATLGILLYTMFIVWFFERKSNPDFKGPFHDQ 474
           PF+  MW+ T  IL+YTMFIVW  E ++NP+F+G + DQ
Sbjct: 578 PFTMEMWVVTGVILIYTMFIVWILEHQNNPEFQGSWKDQ 616


>emb|CAN63664.1| hypothetical protein VITISV_034689 [Vitis vinifera]
          Length = 916

 Score =  183 bits (464), Expect = 1e-44
 Identities = 87/159 (54%), Positives = 119/159 (74%), Gaps = 1/159 (0%)
 Frame = +1

Query: 1   MRIGVPGKTVYPKFVEVVPTGDDSDSVNIYGFCIDLFREVVNILEKNYSLPYEFIPFNGS 180
           ++IG+P  T + KFV+V     D +     GFCID+FREV+ ILE+NYSLPY+F P++G+
Sbjct: 459 LKIGIPANTSFDKFVKVDEAQIDPEK-KYTGFCIDIFREVIKILEQNYSLPYDFHPYDGT 517

Query: 181 YDDLVFSVSNETFDALVGDVTILERRAKLVEFTQPFAESGLSMIVQYKHKPT-RAWLFLK 357
           YD+LV  V  +T+DA+VGD+TIL  R+++VEFTQPFAESGLSMI   K +   +AWLF+K
Sbjct: 518 YDELVDRVYTKTYDAVVGDMTILANRSRIVEFTQPFAESGLSMITPVKSREAYKAWLFMK 577

Query: 358 PFSRSMWLATLGILLYTMFIVWFFERKSNPDFKGPFHDQ 474
           PF+  MW+ T  IL+YTMFIVW  E ++NP+F+G + DQ
Sbjct: 578 PFTMEMWVVTGVILIYTMFIVWILEHQNNPEFQGSWKDQ 616


>ref|XP_002305093.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848057|gb|EEE85604.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 931

 Score =  182 bits (462), Expect = 2e-44
 Identities = 90/158 (56%), Positives = 118/158 (74%)
 Frame = +1

Query: 1   MRIGVPGKTVYPKFVEVVPTGDDSDSVNIYGFCIDLFREVVNILEKNYSLPYEFIPFNGS 180
           M IGVPG+T + KFV+V          +  GFCI+LF +V+ +L   Y LPY+FIP+NG+
Sbjct: 453 MIIGVPGRTSFEKFVKVSTNAAGKKEYD--GFCIELFYKVLGVLA--YDLPYQFIPYNGT 508

Query: 181 YDDLVFSVSNETFDALVGDVTILERRAKLVEFTQPFAESGLSMIVQYKHKPTRAWLFLKP 360
           YDDLV  V N+T+DA+VGDVTIL  RA+ VEFTQP+AESGLSMIV  K+K + AW+F+KP
Sbjct: 509 YDDLVDHVYNKTYDAIVGDVTILASRAEKVEFTQPYAESGLSMIVPAKYKES-AWMFMKP 567

Query: 361 FSRSMWLATLGILLYTMFIVWFFERKSNPDFKGPFHDQ 474
           F++ MWL T  +L+YTMFIVWF E  +NP+F GP+ +Q
Sbjct: 568 FTKEMWLVTGAVLIYTMFIVWFLEHHTNPEFNGPWKNQ 605


>ref|XP_002305094.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222848058|gb|EEE85605.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 784

 Score =  181 bits (458), Expect = 7e-44
 Identities = 91/158 (57%), Positives = 118/158 (74%)
 Frame = +1

Query: 1   MRIGVPGKTVYPKFVEVVPTGDDSDSVNIYGFCIDLFREVVNILEKNYSLPYEFIPFNGS 180
           M IGVPG+T + KFV+V  + + +      GFCI+LF +V  +L+  Y LPY+F PFNG+
Sbjct: 308 MIIGVPGRTSFEKFVKV--STNSAGKKEYDGFCIELFHKVREVLK--YDLPYQFEPFNGT 363

Query: 181 YDDLVFSVSNETFDALVGDVTILERRAKLVEFTQPFAESGLSMIVQYKHKPTRAWLFLKP 360
           YDDLV  V N+TFDA+VGDVTIL  R+  VEFTQP+AESGLSMIV  K + + AW+F+KP
Sbjct: 364 YDDLVDHVYNKTFDAIVGDVTILANRSDKVEFTQPYAESGLSMIVSAKSEES-AWMFMKP 422

Query: 361 FSRSMWLATLGILLYTMFIVWFFERKSNPDFKGPFHDQ 474
           F++ MWL T  IL+YTMFIVWF E  +NP+FKGP+ +Q
Sbjct: 423 FTKEMWLVTGAILIYTMFIVWFLEHHTNPEFKGPWKNQ 460


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