BLASTX nr result

ID: Cnidium21_contig00013912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013912
         (1217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis ...   316   9e-84
ref|XP_002527773.1| conserved hypothetical protein [Ricinus comm...   295   2e-77
gb|AFK41645.1| unknown [Lotus japonicus]                              281   2e-73
gb|AFK36453.1| unknown [Lotus japonicus]                              281   2e-73
ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|2...   279   9e-73

>ref|XP_002284829.1| PREDICTED: F-box protein SKIP28-like [Vitis vinifera]
          Length = 338

 Score =  316 bits (809), Expect = 9e-84
 Identities = 149/307 (48%), Positives = 204/307 (66%), Gaps = 2/307 (0%)
 Frame = +1

Query: 214  QEVTSQS-RPGPPHEAIFLVLSHLPLFELLSMSLVCKSXXXXXXXXXXXXXXXXXXXPLN 390
            +E+T Q    GPPHEA+ LVL++LPLFELL+MS VC+S                   PLN
Sbjct: 33   KELTIQEVERGPPHEALLLVLAYLPLFELLNMSEVCRSLRDAVDKDVLQWLDIIVEKPLN 92

Query: 391  FRVSDHILMEITSKANGRLKSLALIDCVKITDDGLQAVIANNPLINKLYVPGCTNLTPEG 570
               SD I++++TSKANGRL++LAL+ C KITDDGLQ VI  NPLIN+LY+P CT LTPEG
Sbjct: 93   MLFSDEIMIKLTSKANGRLRTLALMSCTKITDDGLQQVIEKNPLINRLYLPACTGLTPEG 152

Query: 571  IIRVVEMLAEHMRKPMHLKINGIYNINSQHLDTIRDLIHFN-QKQQKQRKQMCYHNRHHY 747
            I+R V+ L EH +    ++ING+YN+  +HL+T+   +  N  K + Q +Q+C+ + H  
Sbjct: 153  IMRAVKTLTEHYQALKCVRINGVYNMKKEHLETLSSYLQMNPAKMEGQMQQLCFFHDHRN 212

Query: 748  LWNFKVGDETNPDIDIDTCPKCSEVRMVFDCPYQMCRRKSEENLQIACRGCQYCILRCEE 927
            +   +V +   P ID++ CP+C+EVRMVFDCP + C++K  E     CRGC +CI RCEE
Sbjct: 213  ISVLRVEESYRP-IDLEICPRCNEVRMVFDCPRETCKKK-RERAMAECRGCYFCIPRCEE 270

Query: 928  CGRCVTNPEEQDDAEAACNDILCIECWLQLPKCNFCNKPYCKLHVEQKRFLPESSGFLCE 1107
            CG+C+   E ++  E  C D+LC +CWLQLPKCNFCN+PYC  H   +     S+GF+C 
Sbjct: 271  CGKCI---EVEEPGEVVCADVLCSDCWLQLPKCNFCNRPYCSRHANLQHSTSGSTGFICC 327

Query: 1108 VCYSNFI 1128
            +C+ NFI
Sbjct: 328  ICHVNFI 334


>ref|XP_002527773.1| conserved hypothetical protein [Ricinus communis]
            gi|223532808|gb|EEF34583.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 332

 Score =  295 bits (755), Expect = 2e-77
 Identities = 146/301 (48%), Positives = 195/301 (64%)
 Frame = +1

Query: 214  QEVTSQSRPGPPHEAIFLVLSHLPLFELLSMSLVCKSXXXXXXXXXXXXXXXXXXXPLNF 393
            +    Q+ PGPPHEA+FLVL++LP+FELL+MS VC S                   PL+ 
Sbjct: 34   ESANQQAEPGPPHEALFLVLAYLPVFELLNMSEVCMSLRDAVNRDLLPWLTIIVDRPLSS 93

Query: 394  RVSDHILMEITSKANGRLKSLALIDCVKITDDGLQAVIANNPLINKLYVPGCTNLTPEGI 573
            R+SD ILM+I SKAN RL++L L +C KITDDGL+ VI  NP INKL++P CT LTPEGI
Sbjct: 94   RLSDEILMKIASKANCRLRTLILRNCTKITDDGLEKVIEKNPYINKLHLPACTGLTPEGI 153

Query: 574  IRVVEMLAEHMRKPMHLKINGIYNINSQHLDTIRDLIHFNQKQQKQRKQMCYHNRHHYLW 753
            I+ V++L++H      L+INGIYN+  QHL+T+   +  N  Q K  + + YH   + + 
Sbjct: 154  IKAVKILSQHPNSLKSLQINGIYNLKKQHLETLYSYLQMNPSQHKP-QHILYH--IYRIS 210

Query: 754  NFKVGDETNPDIDIDTCPKCSEVRMVFDCPYQMCRRKSEENLQIACRGCQYCILRCEECG 933
                  E+   +D+D CP+C+EV++VFDC  + C +K  + L   CRGC +CI RCEECG
Sbjct: 211  PSSRSTESGRIVDVDICPQCNEVQIVFDCSRETCMQK-RDRLVADCRGCNFCISRCEECG 269

Query: 934  RCVTNPEEQDDAEAACNDILCIECWLQLPKCNFCNKPYCKLHVEQKRFLPESSGFLCEVC 1113
             C+ + EEQ+D  AAC DILC +CWL L KCN+CNKPYCK H  Q+   P   GF+CE C
Sbjct: 270  GCI-DAEEQED--AACADILCSDCWLCLSKCNYCNKPYCKRHTNQQFSSPGFCGFICEAC 326

Query: 1114 Y 1116
            +
Sbjct: 327  H 327


>gb|AFK41645.1| unknown [Lotus japonicus]
          Length = 322

 Score =  281 bits (720), Expect = 2e-73
 Identities = 145/298 (48%), Positives = 191/298 (64%), Gaps = 2/298 (0%)
 Frame = +1

Query: 226  SQSRPGPPHEAIFLVLSHLPLFELLSMSLVCKSXXXXXXXXXXXXXXXXXXXPLNFRVSD 405
            +Q+   PPHEA+FLVL++LP++++L+MS VCK+                   PL+ R+SD
Sbjct: 20   AQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSD 79

Query: 406  HILMEITSKANGRLKSLALIDCVKITDDGLQAVIANNPLINKLYVPGCTNLTPEGIIRVV 585
             IL++ITSKANGRLK+LAL++C  ITD GLQ V+  NPL NKL++P CT +T EG+ R V
Sbjct: 80   EILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLTNKLHIPACTGITAEGVTRAV 139

Query: 586  EMLAEHMRKPMHLKINGIYNINSQHLDTIRDLIHFNQKQQKQRKQMCYHNRHHYLWNFKV 765
            + L +       L+INGIYN+  +HLD +   +  N   ++Q  QM   N +H   +F V
Sbjct: 140  QTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQ--QMQKPNYYHKRGSFTV 197

Query: 766  --GDETNPDIDIDTCPKCSEVRMVFDCPYQMCRRKSEENLQIACRGCQYCILRCEECGRC 939
               +E    ID++TCPKC EV MV+DCP   C ++  E  Q+ CRGC++CI RCE CG C
Sbjct: 198  FSREENQRIIDLETCPKCFEVTMVYDCPKVECMKR--EKPQVQCRGCKFCIPRCENCGGC 255

Query: 940  VTNPEEQDDAEAACNDILCIECWLQLPKCNFCNKPYCKLHVEQKRFLPESSGFLCEVC 1113
            V + EE+   EAAC DILC+ECWLQLPKCNFCNKPYCK H E          FLC VC
Sbjct: 256  VGSEEEE---EAACADILCLECWLQLPKCNFCNKPYCKQH-ENWWCSSLDPIFLCRVC 309


>gb|AFK36453.1| unknown [Lotus japonicus]
          Length = 299

 Score =  281 bits (719), Expect = 2e-73
 Identities = 140/280 (50%), Positives = 186/280 (66%), Gaps = 2/280 (0%)
 Frame = +1

Query: 226  SQSRPGPPHEAIFLVLSHLPLFELLSMSLVCKSXXXXXXXXXXXXXXXXXXXPLNFRVSD 405
            +Q+   PPHEA+FLVL++LP++++L+MS VCK+                   PL+ R+SD
Sbjct: 20   AQTEQEPPHEALFLVLTYLPVYQVLAMSQVCKALRDAVNNDVLPWLNVIVERPLSSRLSD 79

Query: 406  HILMEITSKANGRLKSLALIDCVKITDDGLQAVIANNPLINKLYVPGCTNLTPEGIIRVV 585
             IL++ITSKANGRLK+LAL++C  ITD GLQ V+  NPLINKL++P CT +T EG+ R V
Sbjct: 80   EILVKITSKANGRLKTLALMNCTHITDKGLQRVVEQNPLINKLHIPACTGITAEGVTRAV 139

Query: 586  EMLAEHMRKPMHLKINGIYNINSQHLDTIRDLIHFNQKQQKQRKQMCYHNRHHYLWNFKV 765
            + L +       L+INGIYN+  +HLD +   +  N   ++Q  QM   N +H   +F V
Sbjct: 140  QTLCQRSNCLSTLRINGIYNLQKEHLDMLAMNLRKNVPLEEQ--QMQKPNYYHKRGSFTV 197

Query: 766  --GDETNPDIDIDTCPKCSEVRMVFDCPYQMCRRKSEENLQIACRGCQYCILRCEECGRC 939
               +E    ID++TCPKC EV MV+DCP   C ++  E  Q+ CRGC++CI RCE CG C
Sbjct: 198  FSREENQRIIDLETCPKCFEVTMVYDCPKVECMKR--EKPQVQCRGCKFCIPRCENCGGC 255

Query: 940  VTNPEEQDDAEAACNDILCIECWLQLPKCNFCNKPYCKLH 1059
            V + EE+   EAAC DILC+ECWLQLPKCNFCNKPYCK H
Sbjct: 256  VGSEEEE---EAACADILCLECWLQLPKCNFCNKPYCKQH 292


>ref|XP_002315864.1| predicted protein [Populus trichocarpa] gi|222864904|gb|EEF02035.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  279 bits (714), Expect = 9e-73
 Identities = 143/309 (46%), Positives = 193/309 (62%)
 Frame = +1

Query: 187  LDTEDKKVLQEVTSQSRPGPPHEAIFLVLSHLPLFELLSMSLVCKSXXXXXXXXXXXXXX 366
            L ++++  ++EV     PGPPHEA+F VL++L +F+LL MS VC                
Sbjct: 14   LGSKNRYTIREV----EPGPPHEALFFVLAYLDVFDLLVMSEVCMPLRDAVSKDVLPWRD 69

Query: 367  XXXXXPLNFRVSDHILMEITSKANGRLKSLALIDCVKITDDGLQAVIANNPLINKLYVPG 546
                 PLN R+SD IL++ITSKA+GRL++LALI+C KITDDGLQ VI  N LI+KL+VPG
Sbjct: 70   IIIERPLNSRLSDEILVQITSKAHGRLRTLALINCFKITDDGLQTVIEKNHLISKLHVPG 129

Query: 547  CTNLTPEGIIRVVEMLAEHMRKPMHLKINGIYNINSQHLDTIRDLIHFNQKQQKQRKQMC 726
            C+ LTPEGIIR V+ L++H      L+INGI+N+  +HL+TI   +  N   QK +  + 
Sbjct: 130  CSGLTPEGIIRTVKTLSQHHNSLESLQINGIHNLKKEHLETISSHLQMNPPHQKPQPILR 189

Query: 727  YHNRHHYLWNFKVGDETNPDIDIDTCPKCSEVRMVFDCPYQMCRRKSEENLQIACRGCQY 906
                                ID+D CPKC+EVR VFDCP +   +   E+    CRGC +
Sbjct: 190  M-------------------IDVDICPKCNEVRTVFDCP-RATSKSGREHSFTHCRGCYF 229

Query: 907  CILRCEECGRCVTNPEEQDDAEAACNDILCIECWLQLPKCNFCNKPYCKLHVEQKRFLPE 1086
            CI RCEECG+CV   ++++  E  C  ILC +CWL LPKC FCN+ YCK H  Q+  LP+
Sbjct: 230  CISRCEECGQCV---DDEELEETLCFGILCTDCWLLLPKCCFCNQAYCKQHENQRCSLPD 286

Query: 1087 SSGFLCEVC 1113
            S+GFLC++C
Sbjct: 287  STGFLCDLC 295


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