BLASTX nr result

ID: Cnidium21_contig00013910 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013910
         (294 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...   159   2e-37
ref|XP_002526974.1| copine, putative [Ricinus communis] gi|22353...   159   3e-37
ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   158   4e-37
ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   154   6e-36

>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score =  159 bits (403), Expect = 2e-37
 Identities = 72/98 (73%), Positives = 85/98 (86%)
 Frame = -1

Query: 294 LIVGIDFSKNNEWTAAKSYNKRSLHHIEDELNPVEQAISIIGKTLLAFDQDNWIPCFGFG 115
           LIVGIDF+K+NEWT AKS+N++SLHHI D LNP +QAI+IIGKTL AFD DN IPC+GFG
Sbjct: 112 LIVGIDFTKSNEWTGAKSFNRKSLHHIGDGLNPYQQAIAIIGKTLAAFDDDNLIPCYGFG 171

Query: 114 DESTRDQDVFNFYPENDGYCNGFEEVLSLYREVVPHVR 1
           D ST DQDVF+FYP+   YCNGFEEVLS YRE+VP++R
Sbjct: 172 DASTHDQDVFSFYPDEGRYCNGFEEVLSRYREIVPNLR 209


>ref|XP_002526974.1| copine, putative [Ricinus communis] gi|223533726|gb|EEF35461.1|
           copine, putative [Ricinus communis]
          Length = 461

 Score =  159 bits (401), Expect = 3e-37
 Identities = 75/98 (76%), Positives = 86/98 (87%)
 Frame = -1

Query: 294 LIVGIDFSKNNEWTAAKSYNKRSLHHIEDELNPVEQAISIIGKTLLAFDQDNWIPCFGFG 115
           LIVGIDF+K+NEWT A+SYN+RSLHHI D LNP EQAISIIGKTL AFD+DN IPCFGFG
Sbjct: 119 LIVGIDFTKSNEWTGARSYNRRSLHHIGDGLNPYEQAISIIGKTLAAFDEDNLIPCFGFG 178

Query: 114 DESTRDQDVFNFYPENDGYCNGFEEVLSLYREVVPHVR 1
           D ST DQDVF FYP+ + +CNGFEEVLS YRE+VP++R
Sbjct: 179 DASTHDQDVFCFYPD-ERFCNGFEEVLSRYREIVPNLR 215


>ref|XP_004142779.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 447

 Score =  158 bits (400), Expect = 4e-37
 Identities = 70/98 (71%), Positives = 85/98 (86%)
 Frame = -1

Query: 294 LIVGIDFSKNNEWTAAKSYNKRSLHHIEDELNPVEQAISIIGKTLLAFDQDNWIPCFGFG 115
           LIVGIDF+K+NEWT A+S+N+RSLHHI D+ NP +QAISIIGKTL AFD DN IPCFGFG
Sbjct: 96  LIVGIDFTKSNEWTGARSFNRRSLHHIGDQPNPYQQAISIIGKTLAAFDDDNLIPCFGFG 155

Query: 114 DESTRDQDVFNFYPENDGYCNGFEEVLSLYREVVPHVR 1
           D ST DQDVF+F+PE + +CNGFEEVL+ Y+E+ PH+R
Sbjct: 156 DASTHDQDVFSFFPEEERFCNGFEEVLNRYQEIAPHLR 193


>ref|XP_002298557.1| predicted protein [Populus trichocarpa] gi|222845815|gb|EEE83362.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  157 bits (396), Expect = 1e-36
 Identities = 73/98 (74%), Positives = 85/98 (86%)
 Frame = -1

Query: 294 LIVGIDFSKNNEWTAAKSYNKRSLHHIEDELNPVEQAISIIGKTLLAFDQDNWIPCFGFG 115
           LIVGIDF+K+NEWT A+SYN+R LHHI D  NP EQAISIIGKTL AFD+DN IPCFGFG
Sbjct: 34  LIVGIDFTKSNEWTGARSYNRRCLHHIGDGFNPYEQAISIIGKTLAAFDEDNLIPCFGFG 93

Query: 114 DESTRDQDVFNFYPENDGYCNGFEEVLSLYREVVPHVR 1
           D ST DQDVF+FYP+ + +CNGFEEVLS YRE+VP++R
Sbjct: 94  DASTHDQDVFSFYPD-ERFCNGFEEVLSRYREIVPNLR 130


>ref|XP_002271885.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2 [Vitis vinifera]
           gi|296087586|emb|CBI34842.3| unnamed protein product
           [Vitis vinifera]
          Length = 461

 Score =  154 bits (390), Expect = 6e-36
 Identities = 71/98 (72%), Positives = 86/98 (87%)
 Frame = -1

Query: 294 LIVGIDFSKNNEWTAAKSYNKRSLHHIEDELNPVEQAISIIGKTLLAFDQDNWIPCFGFG 115
           LIVGIDF+K+NEWT A+S+N++SLHH+ D LNP +QAISIIGKTL AFD+DN IPCFGFG
Sbjct: 117 LIVGIDFTKSNEWTGARSFNRQSLHHVGDGLNPYQQAISIIGKTLAAFDEDNMIPCFGFG 176

Query: 114 DESTRDQDVFNFYPENDGYCNGFEEVLSLYREVVPHVR 1
           D ST DQDVF+FY E++ +CNGFEEVLS YRE+VP +R
Sbjct: 177 DASTHDQDVFSFY-EDERFCNGFEEVLSRYREIVPRLR 213


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