BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013900
         (1343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516394.1| spliceosome associated protein, putative [Ri...   489   e-136
ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vit...   488   e-135
gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]       487   e-135
ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like...   485   e-134
ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncat...   484   e-134

>ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
            gi|223544492|gb|EEF46011.1| spliceosome associated
            protein, putative [Ricinus communis]
          Length = 376

 Score =  489 bits (1259), Expect = e-136
 Identities = 252/353 (71%), Positives = 268/353 (75%), Gaps = 3/353 (0%)
 Frame = -2

Query: 1267 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQASEELLWELFVQAGPVVNVYVPKDR 1088
            MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 1087 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLFGKPIRVNKASQDKKSLDVGANLFVGNLD 908
            VTNLHQGYGFVEFRSEEDADYAIK++NMIKLFGKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61   VTNLHQGYGFVEFRSEEDADYAIKIMNMIKLFGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 907  PDVDEKLLYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYESFEASDAAIEAMNGQYLC 728
            PDVDEKLL+DTFSAFG I +NPKIMRDP+TGNSRGFGFISY+SF+ASDAAIEAMNGQYLC
Sbjct: 121  PDVDEKLLHDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFDASDAAIEAMNGQYLC 180

Query: 727  NRQITVSYAYKKDTKGERHGTPAERVLAASNPGIQKSRPHTLFAIGPPSLNNVAQANGAI 548
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP  QKSRPHTLFA GPP+L ++ QANG +
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSSQKSRPHTLFASGPPTLPSIPQANGTV 240

Query: 547  GAPVPPRPFANGVVPSGXXXXXXXXXXXXXXXXQMS-GPPPSWQGH--QQGQTLAXXXXX 377
            GAPVPPRPFANG VP G                 M     P+WQG   Q GQ +      
Sbjct: 241  GAPVPPRPFANGAVPPGPVPPLRPSAPPTAAFPPMQVAGQPAWQGQPPQPGQVM-PPQVM 299

Query: 376  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYWRQPPPPQHMVGG 218
                                                  Q WRQPPPPQ + GG
Sbjct: 300  PPPPMQFRPPPPNMPPPPPQVAQVLPRPPQPMGMGMQQQVWRQPPPPQQLAGG 352


>ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
          Length = 373

 Score =  488 bits (1257), Expect = e-135
 Identities = 244/288 (84%), Positives = 253/288 (87%), Gaps = 1/288 (0%)
 Frame = -2

Query: 1267 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQASEELLWELFVQAGPVVNVYVPKDR 1088
            MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ +EELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDR 60

Query: 1087 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLFGKPIRVNKASQDKKSLDVGANLFVGNLD 908
            VTNLHQGYGFVEFRSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLFVGNLD
Sbjct: 61   VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD 120

Query: 907  PDVDEKLLYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYESFEASDAAIEAMNGQYLC 728
            PDVDEKLLYDTFSAFG I +NPKIMRDPDTGNSRGFGF+SY+SFEASDAAIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFVSYDSFEASDAAIEAMNGQYLC 180

Query: 727  NRQITVSYAYKKDTKGERHGTPAERVLAASNPGIQKSRPHTLFAIGPPSLNNVAQANGAI 548
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP   KSRPHTLFA GPP+L NV QANG +
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPSAPKSRPHTLFASGPPTLPNVPQANGNM 240

Query: 547  GAPVPPRPFANGVVPSGXXXXXXXXXXXXXXXXQMS-GPPPSWQGHQQ 407
            GAP+PPRPFANGVVP                   M    PPSWQG  Q
Sbjct: 241  GAPMPPRPFANGVVPPVPIPAMRPPPPQSGAFPPMQLAGPPSWQGQPQ 288


>gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
          Length = 368

 Score =  487 bits (1254), Expect = e-135
 Identities = 254/352 (72%), Positives = 266/352 (75%), Gaps = 2/352 (0%)
 Frame = -2

Query: 1267 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQASEELLWELFVQAGPVVNVYVPKDR 1088
            MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 1087 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLFGKPIRVNKASQDKKSLDVGANLFVGNLD 908
            VTN HQGYGFVEFRSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKS+DVGANLF+GNLD
Sbjct: 61   VTNSHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSVDVGANLFIGNLD 120

Query: 907  PDVDEKLLYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYESFEASDAAIEAMNGQYLC 728
            PDVDEKLLYDTFSAFG I +NPKIMRDP+TGNSRGFGFISY+SFEASDAAIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPETGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 727  NRQITVSYAYKKDTKGERHGTPAERVLAASNPGIQKSRPHTLFAIGPPSLNNVAQANGAI 548
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP +QKSRPHT+FA GPP+L NVAQA+  I
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPNVQKSRPHTMFASGPPTLQNVAQASANI 240

Query: 547  GAPVPPRPFANGVVPSGXXXXXXXXXXXXXXXXQMSGPPP-SWQGHQ-QGQTLAXXXXXX 374
             APVPPRPFANG VP                   M  PPP SWQG Q  GQT        
Sbjct: 241  AAPVPPRPFANGNVPPTSIPPFRPPPPQASMFPPMPLPPPQSWQGQQPPGQT-------A 293

Query: 373  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQYWRQPPPPQHMVGG 218
                                                   WR PPPPQ + GG
Sbjct: 294  LPPPPMQQFRSMPPPPPQIAPALPRPPPPPVGMVTAPNVWRPPPPPQQLGGG 345


>ref|XP_004147654.1| PREDICTED: splicing factor 3B subunit 4-like [Cucumis sativus]
            gi|449498825|ref|XP_004160645.1| PREDICTED: splicing
            factor 3B subunit 4-like [Cucumis sativus]
          Length = 379

 Score =  485 bits (1248), Expect = e-134
 Identities = 243/289 (84%), Positives = 253/289 (87%), Gaps = 2/289 (0%)
 Frame = -2

Query: 1267 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQASEELLWELFVQAGPVVNVYVPKDR 1088
            MTT+IAPGVGANLLGQHA ERNQDATAYVGNLDPQ SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTKIAPGVGANLLGQHAPERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR 60

Query: 1087 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLFGKPIRVNKASQDKKSLDVGANLFVGNLD 908
            VTNLHQGYGF+EFRSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61   VTNLHQGYGFIEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 907  PDVDEKLLYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYESFEASDAAIEAMNGQYLC 728
            PDVDEKLLYDTFSAFG I +NPKIMRDPDTGNSRGFGFISY+SFEASDAAIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC 180

Query: 727  NRQITVSYAYKKDTKGERHGTPAERVLAASNPGIQKSRPHTLFAIGPPSLNNVAQANGAI 548
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP  QKSRPHTLFA GPP+L  VAQ NGAI
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNP--QKSRPHTLFASGPPTLPKVAQPNGAI 238

Query: 547  GAPVPPRPFANGVVPSG--XXXXXXXXXXXXXXXXQMSGPPPSWQGHQQ 407
            GAPVPPRPFANG +                      M+G PP+WQG  Q
Sbjct: 239  GAPVPPRPFANGAITPNPIPAIRPSPPQGVAFPPMPMAGQPPAWQGQPQ 287


>ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
            gi|355489744|gb|AES70947.1| Splicing factor 3B subunit
            [Medicago truncatula]
          Length = 379

 Score =  484 bits (1245), Expect = e-134
 Identities = 245/294 (83%), Positives = 252/294 (85%), Gaps = 3/294 (1%)
 Frame = -2

Query: 1267 MTTRIAPGVGANLLGQHAAERNQDATAYVGNLDPQASEELLWELFVQAGPVVNVYVPKDR 1088
            MTTRIAPGVGANLLGQH+AERNQDATAYVGNLDPQ SEELLWELFVQAGPVVNVYVPKDR
Sbjct: 1    MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDR 60

Query: 1087 VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLFGKPIRVNKASQDKKSLDVGANLFVGNLD 908
            VTN HQGYGFVEFRSEEDADYAIKVLNMIKL+GKPIRVNKASQDKKSLDVGANLF+GNLD
Sbjct: 61   VTNQHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFIGNLD 120

Query: 907  PDVDEKLLYDTFSAFGGIASNPKIMRDPDTGNSRGFGFISYESFEASDAAIEAMNGQYLC 728
            PDVDEKLLYDTFSAFG I +NPKIMRDPDTGNSRGFGFISY+SFEASD+AIEAMNGQYLC
Sbjct: 121  PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLC 180

Query: 727  NRQITVSYAYKKDTKGERHGTPAERVLAASNPGIQKSRPHTLFAIGPPSLNNVAQANGAI 548
            NRQITVSYAYKKDTKGERHGTPAERVLAASNP  QKSRPHTLFA GPPSL N  QANG I
Sbjct: 181  NRQITVSYAYKKDTKGERHGTPAERVLAASNPTAQKSRPHTLFASGPPSLPNAPQANGTI 240

Query: 547  GAPVPPRPFANGVVPSGXXXXXXXXXXXXXXXXQMSGPPPS---WQGHQQGQTL 395
             APVPPRPFANGV P                   M  PPP    W   QQGQ +
Sbjct: 241  PAPVPPRPFANGVAPP-PIHVIQPPPPQAPAFQPMQMPPPGQQVWHQQQQGQPM 293