BLASTX nr result

ID: Cnidium21_contig00013899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013899
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22611.3| unnamed protein product [Vitis vinifera]               84   3e-14
emb|CAN79447.1| hypothetical protein VITISV_037464 [Vitis vinifera]    60   5e-07
ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258...    58   2e-06
ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lyc...    57   3e-06

>emb|CBI22611.3| unnamed protein product [Vitis vinifera]
          Length = 297

 Score = 84.0 bits (206), Expect = 3e-14
 Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 1/144 (0%)
 Frame = +1

Query: 157 MTIFKVRTPKYRFNXXXXXXXXXXXXXXXXXXXMKLNAQVTIKNKNFGPYEYQDCYLTIS 336
           +T+ ++R+PK+RF                    ++ NA+V +KN NFG +++++  +T++
Sbjct: 143 VTLMRIRSPKFRFRAVSIENLNYTSDTTSPSFNIRFNAKVAVKNTNFGHFKFKNSTITLA 202

Query: 337 YRGRSXXXXXXXXXXXXXXXXXXXXXDINVT-HAASGNSNLKNDISSGALIMGSKSEMRG 513
           YRG                        ++VT +  S NSNL +DI+SG L +  + ++ G
Sbjct: 203 YRGDHVGDAKISKARARARSTKKMNVTVDVTSNNVSSNSNLASDINSGFLTLTGQGKLNG 262

Query: 514 QVKLLKIIAKDKQPKMQCTMSINL 585
           +V L+K+  K K P+M CT+ INL
Sbjct: 263 KVHLMKVFKKKKSPQMNCTIKINL 286


>emb|CAN79447.1| hypothetical protein VITISV_037464 [Vitis vinifera]
          Length = 186

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
 Frame = +1

Query: 157 MTIFKVRTPKYRFNXXXXXXXXXXXXXXXXXXXMKLNAQVTIKNKNFGPYEYQDCYLTIS 336
           + + K+R PK R                     M L A+VT+KN NFG +++ +   TIS
Sbjct: 36  LLVLKIRDPKVRI----ASISVENQHFSTNSFSMDLKARVTVKNTNFGHFKFDNSTATIS 91

Query: 337 YRGRSXXXXXXXXXXXXXXXXXXXXXDINVTHAASGN-SNLKNDISSGALIMGSKSEMRG 513
           Y G +                      + ++ +   N   L+ D++SG L + S +++ G
Sbjct: 92  YFGTAVGEATILKARARSRSTKRFNITVPISSSKVNNHRQLRRDLNSGVLNLSSTAKLSG 151

Query: 514 QVKLLKIIAKDKQPKMQCTMSIN 582
           ++ L KI  K K  +M CTM ++
Sbjct: 152 KIHLFKIFKKKKSAEMSCTMELH 174


>ref|XP_002277286.1| PREDICTED: uncharacterized protein LOC100258567 [Vitis vinifera]
           gi|147832282|emb|CAN73280.1| hypothetical protein
           VITISV_040609 [Vitis vinifera]
           gi|297745338|emb|CBI40418.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 3/145 (2%)
 Frame = +1

Query: 160 TIFKVRTPKYRFNXXXXXXXXXXXXXXXXXXX--MKLNAQVTIKNKNFGPYEYQDCYLTI 333
           T+F+V+ P  + N                     M L A V++KN NF  + Y++   T+
Sbjct: 60  TVFRVKDPVIKLNGFTVDKLELINGTTTPGPGVNMSLTADVSVKNPNFASFRYKNTTTTL 119

Query: 334 SYRGRSXXXXXXXXXXXXXXXXXXXXXDINVT-HAASGNSNLKNDISSGALIMGSKSEMR 510
            Y G                        I +   +   N +L  DISSG L M + S + 
Sbjct: 120 FYSGTVIGEARGPPGQAKARRTMKMNVTIEIILDSLMSNPSLLTDISSGILPMNTYSRVP 179

Query: 511 GQVKLLKIIAKDKQPKMQCTMSINL 585
           G+VK+LKII K    KM C++++N+
Sbjct: 180 GRVKMLKIIKKHVVVKMNCSVTVNI 204


>ref|NP_001233914.1| plant cell wall protein SlTFR88 [Solanum lycopersicum]
           gi|94549041|gb|ABF39005.1| plant cell wall protein
           SlTFR88 [Solanum lycopersicum]
          Length = 226

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 34/111 (30%), Positives = 55/111 (49%), Gaps = 1/111 (0%)
 Frame = +1

Query: 256 MKLNAQVTIKNKNFGPYEYQDCYLTISYRGRSXXXXXXXXXXXXXXXXXXXXXDINV-TH 432
           M + A V++KN N+  ++Y +   TISYR                         I++ T 
Sbjct: 100 MTIKADVSVKNPNYSSFKYSNTTTTISYRDAVIGEARGPPGKSKARKTMRMNVTIDIMTD 159

Query: 433 AASGNSNLKNDISSGALIMGSKSEMRGQVKLLKIIAKDKQPKMQCTMSINL 585
               +  L++DISSG L M S + + G+VKLL +I K    KM C++++N+
Sbjct: 160 KIMSHPGLQDDISSGLLTMNSYTSVGGRVKLLNMIKKYVVVKMNCSITVNI 210


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