BLASTX nr result

ID: Cnidium21_contig00013887 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013887
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]   125   5e-27
emb|CAN66054.1| hypothetical protein VITISV_009511 [Vitis vinifera]   123   2e-26
gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold ...   119   2e-25
emb|CAA72989.1| unnamed protein product [Brassica oleracea var. ...   118   4e-25
emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]   118   4e-25

>emb|CAN62906.1| hypothetical protein VITISV_043610 [Vitis vinifera]
          Length = 1498

 Score =  125 bits (313), Expect = 5e-27
 Identities = 58/152 (38%), Positives = 94/152 (61%), Gaps = 2/152 (1%)
 Frame = +2

Query: 26  SRFTYTDMQNPLFLHPSDGPPSISVTKLQGAGDYRAWKRSFEIQLSAKRKQGFVDGSVKR 205
           + F+  D+ NP F H SD P  + ++K     +Y AWKR+  + L++K K GFV+GS+K 
Sbjct: 8   TNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKA 67

Query: 206 STT--DAVQSSQWDTCNNMVISWIHNNISDAIKTSVLFINTAHDIWQQLEKRFLLTNGSR 379
            +   D    + W  CN+MV SWI N ++  I  SV++ +TAH++W+ L +RF  +N  R
Sbjct: 68  PSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIANSVIYYSTAHEVWEDLCERFSQSNAPR 127

Query: 380 KYKLSRDLFNLKQNGMSISDYFTSLSCIWEEL 475
            +++ RD+  L+Q  +S+S Y+T L  +W+EL
Sbjct: 128 IFEIQRDIACLRQEQLSVSAYYTKLKGLWDEL 159


>emb|CAN66054.1| hypothetical protein VITISV_009511 [Vitis vinifera]
          Length = 175

 Score =  123 bits (308), Expect = 2e-26
 Identities = 58/152 (38%), Positives = 93/152 (61%), Gaps = 2/152 (1%)
 Frame = +2

Query: 26  SRFTYTDMQNPLFLHPSDGPPSISVTKLQGAGDYRAWKRSFEIQLSAKRKQGFVDGSVKR 205
           + F+  D+ NP F H SD P  + ++K     +Y AWKR+  + L++K K GFV+GS+K 
Sbjct: 8   TNFSKADLSNPYFTHHSDHPGLVLISKSLNGDNYSAWKRAMILALNSKNKLGFVNGSIKA 67

Query: 206 STT--DAVQSSQWDTCNNMVISWIHNNISDAIKTSVLFINTAHDIWQQLEKRFLLTNGSR 379
            +   D    + W  CN+MV SWI N ++  I  SV++ +TAH++W+ L +RF  +N  R
Sbjct: 68  PSEEIDPEGYATWSRCNDMVHSWIVNTLNPEIADSVIYYSTAHEVWEDLCERFSQSNAPR 127

Query: 380 KYKLSRDLFNLKQNGMSISDYFTSLSCIWEEL 475
            +++ RD+  L+Q  +S+S Y T L  +W+EL
Sbjct: 128 IFEIQRDIACLRQEQLSVSAYXTKLKGLWDEL 159


>gb|ABD32334.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 772

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/138 (40%), Positives = 84/138 (60%)
 Frame = +2

Query: 62  FLHPSDGPPSISVTKLQGAGDYRAWKRSFEIQLSAKRKQGFVDGSVKRSTTDAVQSSQWD 241
           ++HPS+GP S++VT L    +Y AW RS +  L  K K  F+DGSV     D +  + W+
Sbjct: 20  YVHPSEGPNSVTVTPLLTGPNYLAWNRSMKRALGTKNKFVFIDGSVPIPPMDDLNRTAWE 79

Query: 242 TCNNMVISWIHNNISDAIKTSVLFINTAHDIWQQLEKRFLLTNGSRKYKLSRDLFNLKQN 421
            CNN+++SWI N++S  I  +++F   A D+W +L++RF   +  R   L   + NLKQ 
Sbjct: 80  RCNNLILSWIINSVSPQIAQTIVFHEYAIDVWIELQERFSKVDRIRVASLRSSINNLKQG 139

Query: 422 GMSISDYFTSLSCIWEEL 475
             S+ DYFTS+  +WEEL
Sbjct: 140 DKSVLDYFTSIKSLWEEL 157


>emb|CAA72989.1| unnamed protein product [Brassica oleracea var. acephala]
          Length = 1131

 Score =  118 bits (296), Expect = 4e-25
 Identities = 57/142 (40%), Positives = 86/142 (60%)
 Frame = +2

Query: 50  QNPLFLHPSDGPPSISVTKLQGAGDYRAWKRSFEIQLSAKRKQGFVDGSVKRSTTDAVQS 229
           Q+PLF+H +D P    ++      +Y  W  + +I L AK K GFVDG++ R  T     
Sbjct: 12  QSPLFMHNADHPGLQLISLKLDGSNYDDWNAAMKIALDAKNKIGFVDGTLTRPDTSDPTF 71

Query: 230 SQWDTCNNMVISWIHNNISDAIKTSVLFINTAHDIWQQLEKRFLLTNGSRKYKLSRDLFN 409
             W  CN+MV SW+ N++S  I  S+L +N A DIW+ L  RF +TN  R + L++++ +
Sbjct: 72  RLWSRCNSMVKSWLLNSVSPQIYRSILRLNDAADIWRDLHGRFHMTNLPRTFNLTQEIQD 131

Query: 410 LKQNGMSISDYFTSLSCIWEEL 475
           LKQ  MS+SDY+T+L  +W+ L
Sbjct: 132 LKQGSMSLSDYYTTLKTLWDNL 153


>emb|CAN61417.1| hypothetical protein VITISV_009790 [Vitis vinifera]
          Length = 332

 Score =  118 bits (296), Expect = 4e-25
 Identities = 56/146 (38%), Positives = 87/146 (59%), Gaps = 2/146 (1%)
 Frame = +2

Query: 44  DMQNPLFLHPSDGPPSISVTKLQGAGDYRAWKRSFEIQLSAKRKQGFVDGSVKRS--TTD 217
           D  NP FLH SD P  + V+K     +Y  W R+  I L+AK K GF+DG+   S  T  
Sbjct: 13  DAANPYFLHHSDHPGMVLVSKPLNGDNYSTWCRAMTISLNAKSKLGFIDGTTTMSSATDK 72

Query: 218 AVQSSQWDTCNNMVISWIHNNISDAIKTSVLFINTAHDIWQQLEKRFLLTNGSRKYKLSR 397
             + + W  CN+M++SWI N++S  +  SV+F  TA ++W+ L  RF  +N  R +++ R
Sbjct: 73  PDEHASWKKCNDMILSWILNSLSQDLADSVIFSTTAQEVWEDLRDRFSQSNAPRIFQIER 132

Query: 398 DLFNLKQNGMSISDYFTSLSCIWEEL 475
           D+  L Q+ M+++ Y+T L  +W+EL
Sbjct: 133 DIACLTQDQMTVAAYYTRLKKLWDEL 158


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