BLASTX nr result
ID: Cnidium21_contig00013863
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00013863
(1689 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding prote... 595 e-168
emb|CBI16387.3| unnamed protein product [Vitis vinifera] 590 e-166
ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding prote... 573 e-161
ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP... 551 e-154
ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|2... 543 e-152
>ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
1 [Vitis vinifera]
Length = 447
Score = 595 bits (1535), Expect = e-168
Identities = 303/441 (68%), Positives = 336/441 (76%), Gaps = 4/441 (0%)
Frame = +2
Query: 113 WMMSAQATITATPSPSVTTYSSLPYHQPTTHEEVRTLWIGDLPYWADESYLNTWFSPAAQ 292
WM + A+ S + S+ PY QPT+ EEVRTLWIGDL YW DE+YL++ F+ +
Sbjct: 11 WMHPSHASAATVSSMA----SAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGE 66
Query: 293 VLSIKVIRNKLTGQPEGYGFVEFPSHAVAERILQTYNAAQIPGTELTFRLNWASFGIGEK 472
V+SIK+IRNK+TGQPEGYGFVEF SHA AERILQ YN Q+PGTE TFRLNWASFGIGE+
Sbjct: 67 VISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGER 126
Query: 473 RPETGPEHSIFVGDLAPEVTDVLLQDTFAAQYPSVRGAKVVTDPATGRSKGYGFVKFADE 652
RP+ GPEHSIFVGDLAP+VTD LLQ+TF AQYPSVRGAKVVTDP TGR+KGYGFVKF+DE
Sbjct: 127 RPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186
Query: 653 NERNHSMTEMNGVYCSTRPMRISAATPKKTPGFQQPYAGVKXXXXXXXXXXXXXXXXXXX 832
ERN +MTEMNGVYCSTRPMRISAATPKKT GFQQ YA
Sbjct: 187 MERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA 246
Query: 833 DNDINNTTIFIGNLDPNVTEEELKQIFRHLGEISYVRIPATKGCGFVQFVSRASAEEAIQ 1012
DNDINNTTIF+GNLDPNVTEEELKQIF GE+ YV+IPA +GCGFVQF +R SAEEAIQ
Sbjct: 247 DNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQ 306
Query: 1013 RMQGTVIGQQVVRISWGRSPSSKQDQPGAWGVQADPSQW-XXXXXXXXXXXXXXXXVTQD 1189
RMQGTVIGQ VVRISWGRSP++KQD PG+WG QADPSQW TQD
Sbjct: 307 RMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQD 366
Query: 1190 QSTYAYGAYPGYSQYPQQAEVNQD---VAGAVPPGEQREELDDPLAPPDVDKLNAAYLAV 1360
S YAYGAY GY QYPQQAE QD +AGAVP EQR+EL DPLA PDVDKLNAAYLAV
Sbjct: 367 PSLYAYGAYAGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAV 426
Query: 1361 HGRAILGHPLWQRTSTFSKQA 1423
HG AILG LW +TS FS+ A
Sbjct: 427 HGSAILGRSLWLKTSPFSQMA 447
>emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 590 bits (1521), Expect = e-166
Identities = 300/439 (68%), Positives = 333/439 (75%), Gaps = 2/439 (0%)
Frame = +2
Query: 113 WMMSAQATITATPSPSVTTYSSLPYHQPTTHEEVRTLWIGDLPYWADESYLNTWFSPAAQ 292
WM + A+ S + S+ PY QPT+ EEVRTLWIGDL YW DE+YL++ F+ +
Sbjct: 11 WMHPSHASAATVSSMA----SAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGE 66
Query: 293 VLSIKVIRNKLTGQPEGYGFVEFPSHAVAERILQTYNAAQIPGTELTFRLNWASFGIGEK 472
V+SIK+IRNK+TGQPEGYGFVEF SHA AERILQ YN Q+PGTE TFRLNWASFGIGE+
Sbjct: 67 VISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGER 126
Query: 473 RPETGPEHSIFVGDLAPEVTDVLLQDTFAAQYPSVRGAKVVTDPATGRSKGYGFVKFADE 652
RP+ GPEHSIFVGDLAP+VTD LLQ+TF AQYPSVRGAKVVTDP TGR+KGYGFVKF+DE
Sbjct: 127 RPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186
Query: 653 NERNHSMTEMNGVYCSTRPMRISAATPKKTPGFQQPYAGVKXXXXXXXXXXXXXXXXXXX 832
ERN +MTEMNGVYCSTRPMRISAATPKKT GFQQ YA
Sbjct: 187 MERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA 246
Query: 833 DNDINNTTIFIGNLDPNVTEEELKQIFRHLGEISYVRIPATKGCGFVQFVSRASAEEAIQ 1012
DNDINNTTIF+GNLDPNVTEEELKQIF GE+ YV+IPA +GCGFVQF +R SAEEAIQ
Sbjct: 247 DNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQ 306
Query: 1013 RMQGTVIGQQVVRISWGRSPSSKQDQPGAWGVQADPSQW-XXXXXXXXXXXXXXXXVTQD 1189
RMQGTVIGQ VVRISWGRSP++KQD PG+WG QADPSQW TQD
Sbjct: 307 RMQGTVIGQLVVRISWGRSPTAKQDLPGSWGQQADPSQWSSAYYGYGQGYDAYPYGATQD 366
Query: 1190 QSTYAYGAYPGYSQYPQQAEVN-QDVAGAVPPGEQREELDDPLAPPDVDKLNAAYLAVHG 1366
S YAYGAY GY QYPQQA +AGAVP EQR+EL DPLA PDVDKLNAAYLAVHG
Sbjct: 367 PSLYAYGAYAGYLQYPQQARYYLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAVHG 426
Query: 1367 RAILGHPLWQRTSTFSKQA 1423
AILG LW +TS FS+ A
Sbjct: 427 SAILGRSLWLKTSPFSQMA 445
>ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
2 [Vitis vinifera]
Length = 438
Score = 573 bits (1477), Expect = e-161
Identities = 297/441 (67%), Positives = 329/441 (74%), Gaps = 4/441 (0%)
Frame = +2
Query: 113 WMMSAQATITATPSPSVTTYSSLPYHQPTTHEEVRTLWIGDLPYWADESYLNTWFSPAAQ 292
WM + A+ S + S+ PY QPT+ EEVRTLWIGDL YW DE+YL++ F+ +
Sbjct: 11 WMHPSHASAATVSSMA----SAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGE 66
Query: 293 VLSIKVIRNKLTGQPEGYGFVEFPSHAVAERILQTYNAAQIPGTELTFRLNWASFGIGEK 472
V+SIK+IRNK+TGQPEGYGFVEF SHA AERILQ YN Q+PGTE TFRLNWASFGIGE+
Sbjct: 67 VISIKIIRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWASFGIGER 126
Query: 473 RPETGPEHSIFVGDLAPEVTDVLLQDTFAAQYPSVRGAKVVTDPATGRSKGYGFVKFADE 652
RP+ GPEHSIFVGDLAP+VTD LLQ+TF AQYPSVRGAKVVTDP TGR+KGYGFVKF+DE
Sbjct: 127 RPDAGPEHSIFVGDLAPDVTDYLLQETFRAQYPSVRGAKVVTDPNTGRTKGYGFVKFSDE 186
Query: 653 NERNHSMTEMNGVYCSTRPMRISAATPKKTPGFQQPYAGVKXXXXXXXXXXXXXXXXXXX 832
ERN +MTEMNGVYCSTRPMRISAATPKKT GFQQ YA
Sbjct: 187 MERNRAMTEMNGVYCSTRPMRISAATPKKTTGFQQQYAAAAKALYPAPAYTTPPLQALPA 246
Query: 833 DNDINNTTIFIGNLDPNVTEEELKQIFRHLGEISYVRIPATKGCGFVQFVSRASAEEAIQ 1012
DNDINNTTIF+GNLDPNVTEEELKQIF GE+ YV+IPA +GCGFVQF +R SAEEAIQ
Sbjct: 247 DNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTSAEEAIQ 306
Query: 1013 RMQGTVIGQQVVRISWGRSPSSKQDQPGAWGVQADPSQW-XXXXXXXXXXXXXXXXVTQD 1189
RMQGTVIGQ VVRISWGRSP++K QADPSQW TQD
Sbjct: 307 RMQGTVIGQLVVRISWGRSPTAK---------QADPSQWSSAYYGYGQGYDAYPYGATQD 357
Query: 1190 QSTYAYGAYPGYSQYPQQAEVNQD---VAGAVPPGEQREELDDPLAPPDVDKLNAAYLAV 1360
S YAYGAY GY QYPQQAE QD +AGAVP EQR+EL DPLA PDVDKLNAAYLAV
Sbjct: 358 PSLYAYGAYAGYLQYPQQAEGVQDLAAMAGAVPAVEQRDELYDPLATPDVDKLNAAYLAV 417
Query: 1361 HGRAILGHPLWQRTSTFSKQA 1423
HG AILG LW +TS FS+ A
Sbjct: 418 HGSAILGRSLWLKTSPFSQMA 438
>ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 551 bits (1420), Expect = e-154
Identities = 281/415 (67%), Positives = 313/415 (75%), Gaps = 3/415 (0%)
Frame = +2
Query: 185 YHQPTTHEEVRTLWIGDLPYWADESYLNTWFSPAAQVLSIKVIRNKLTGQPEGYGFVEFP 364
+HQPTT EEVRTLWIGDL YW DESYLN+ F+ +V+SIK+IRNK+TGQPEGYGFVEF
Sbjct: 10 HHQPTTVEEVRTLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFV 69
Query: 365 SHAVAERILQTYNAAQIPGTELTFRLNWASFGIGEKRPETGPEHSIFVGDLAPEVTDVLL 544
SHA AERILQTYN Q+PGTE TFRLNWASFGIGE+RP+ GPEHSIFVGDLAP+VTD LL
Sbjct: 70 SHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLL 129
Query: 545 QDTFAAQYPSVRGAKVVTDPATGRSKGYGFVKFADENERNHSMTEMNGVYCSTRPMRISA 724
Q+TF AQYPSVRGAKVVTDP TGRSKGYGFVKFADENERN +M+EMNGVYCSTRPMRISA
Sbjct: 130 QETFRAQYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMSEMNGVYCSTRPMRISA 189
Query: 725 ATPKKTPGFQQPYAGVKXXXXXXXXXXXXXXXXXXXDNDINNTTIFIGNLDPNVTEEELK 904
ATPKKT G QQ Y+ K D D NNTTIF+GNLDPN+TEEELK
Sbjct: 190 ATPKKTIGVQQQYSLGK--AMYPVPAYTTSVPVLPADYDANNTTIFVGNLDPNITEEELK 247
Query: 905 QIFRHLGEISYVRIPATKGCGFVQFVSRASAEEAIQRMQGTVIGQQVVRISWGRSPSSKQ 1084
Q F GEI+YV+IPA KGCGFVQF +RASAEEAIQ+MQG +IGQQVVR SWGR+P++KQ
Sbjct: 248 QTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGKIIGQQVVRTSWGRNPAAKQ 307
Query: 1085 DQPGAWGVQADPSQWXXXXXXXXXXXXXXXXVTQDQSTYAYGAYPGYSQYPQQAEVNQD- 1261
D WG Q DP+QW V QD S Y YGAY GY+ YPQQ + QD
Sbjct: 308 DLT-TWGQQVDPNQWSAYYGYGGTYDAYGYGVVQDPSLYGYGAYSGYASYPQQVDGVQDL 366
Query: 1262 --VAGAVPPGEQREELDDPLAPPDVDKLNAAYLAVHGRAILGHPLWQRTSTFSKQ 1420
VAGAVP EQ EE +D L PDVD LN AYL+ H AILG PLW TS+ +Q
Sbjct: 367 ATVAGAVPSVEQGEEWNDTLDTPDVDCLNDAYLSKHESAILGWPLWLTTSSLVRQ 421
>ref|XP_002313332.1| predicted protein [Populus trichocarpa] gi|222849740|gb|EEE87287.1|
predicted protein [Populus trichocarpa]
Length = 415
Score = 543 bits (1398), Expect = e-152
Identities = 276/413 (66%), Positives = 303/413 (73%)
Frame = +2
Query: 185 YHQPTTHEEVRTLWIGDLPYWADESYLNTWFSPAAQVLSIKVIRNKLTGQPEGYGFVEFP 364
YHQP T EEVRTLWIGDL YWADESYL + F+ +V+SIK+IRNKLTGQPEGYGFVEF
Sbjct: 10 YHQPATLEEVRTLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFV 69
Query: 365 SHAVAERILQTYNAAQIPGTELTFRLNWASFGIGEKRPETGPEHSIFVGDLAPEVTDVLL 544
SHA AERILQTYN Q+PGTE TFRLNWASFGIGE+RP+ GPEHSIFVGDLAP+VTD LL
Sbjct: 70 SHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPEHSIFVGDLAPDVTDYLL 129
Query: 545 QDTFAAQYPSVRGAKVVTDPATGRSKGYGFVKFADENERNHSMTEMNGVYCSTRPMRISA 724
Q+TF YPSVRGAKVVTDP TGRSKGYGFVKFADENERN +MTEMNGV+CSTRPMRIS
Sbjct: 130 QETFRVHYPSVRGAKVVTDPNTGRSKGYGFVKFADENERNRAMTEMNGVFCSTRPMRISM 189
Query: 725 ATPKKTPGFQQPYAGVKXXXXXXXXXXXXXXXXXXXDNDINNTTIFIGNLDPNVTEEELK 904
ATPKKT FQQ YA K D D+ NTTIF+GNLDPN TEE+L+
Sbjct: 190 ATPKKTTSFQQQYAVPK--AFYPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEEDLR 247
Query: 905 QIFRHLGEISYVRIPATKGCGFVQFVSRASAEEAIQRMQGTVIGQQVVRISWGRSPSSKQ 1084
Q F LGEI+ V+IPA +GCGFVQF +R SAEEAIQRMQG VIGQQ VRISWG+ KQ
Sbjct: 248 QTFLQLGEIASVKIPAGRGCGFVQFATRTSAEEAIQRMQGHVIGQQPVRISWGK----KQ 303
Query: 1085 DQPGAWGVQADPSQWXXXXXXXXXXXXXXXXVTQDQSTYAYGAYPGYSQYPQQAEVNQDV 1264
D WG Q D QW T D S YAY AY GY QYPQQ E D+
Sbjct: 304 DLTATWGQQVD--QWNAYYGYGQGYDAYAYGGTHDPSLYAYNAYAGYPQYPQQVEGAPDM 361
Query: 1265 AGAVPPGEQREELDDPLAPPDVDKLNAAYLAVHGRAILGHPLWQRTSTFSKQA 1423
AG VP E REE DPLA PDVDKLNAAYL+ HG AI G LW +TS+ ++QA
Sbjct: 362 AGVVPVAEHREESYDPLAAPDVDKLNAAYLSTHGSAIFGRTLWMKTSSLTQQA 414