BLASTX nr result

ID: Cnidium21_contig00013843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00013843
         (588 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626606.1| Conserved oligomeric Golgi complex subunit [...   204   1e-50
ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved ol...   202   4e-50
ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi comple...   202   4e-50
ref|XP_002302674.1| predicted protein [Populus trichocarpa] gi|2...   201   6e-50
ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi comple...   197   8e-49

>ref|XP_003626606.1| Conserved oligomeric Golgi complex subunit [Medicago truncatula]
            gi|87240849|gb|ABD32707.1| Conserved oligomeric Golgi
            complex component 4, related [Medicago truncatula]
            gi|355501621|gb|AES82824.1| Conserved oligomeric Golgi
            complex subunit [Medicago truncatula]
          Length = 747

 Score =  204 bits (518), Expect = 1e-50
 Identities = 111/164 (67%), Positives = 115/164 (70%)
 Frame = -1

Query: 588  HDVETNIAWLQPLMTANNYDLFVHLVIDFVVKRLEVIMMQKRFSQLGGLQLDRDARALXX 409
            H VETN+AWLQPLMTANNYD FVHLVIDF+VKRLEVIMMQKRFSQLGGLQLDRDARAL  
Sbjct: 616  HAVETNVAWLQPLMTANNYDTFVHLVIDFIVKRLEVIMMQKRFSQLGGLQLDRDARALVS 675

Query: 408  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFARLTQMATILNLEK 229
                                                        KFARLTQMATILNLEK
Sbjct: 676  HFSIMTQRTVRD--------------------------------KFARLTQMATILNLEK 703

Query: 228  VSEILDFWGENSGPMTWRLTPAEVRRVLSLRIDFRPEAIAALKL 97
            VSEILDFWGENSGPMTWRLTPAEVRRVL LR+DF+PEAIAALKL
Sbjct: 704  VSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 747


>ref|XP_004166514.1| PREDICTED: LOW QUALITY PROTEIN: conserved oligomeric Golgi complex
            subunit 4-like [Cucumis sativus]
          Length = 751

 Score =  202 bits (513), Expect = 4e-50
 Identities = 110/164 (67%), Positives = 115/164 (70%)
 Frame = -1

Query: 588  HDVETNIAWLQPLMTANNYDLFVHLVIDFVVKRLEVIMMQKRFSQLGGLQLDRDARALXX 409
            H VETN+AWLQPLMTANNYD FVHLVIDF+VKRLEVIM+QKRFSQLGGLQLDRDARAL  
Sbjct: 620  HAVETNVAWLQPLMTANNYDSFVHLVIDFIVKRLEVIMVQKRFSQLGGLQLDRDARALVS 679

Query: 408  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFARLTQMATILNLEK 229
                                                        KFARLTQMATILNLEK
Sbjct: 680  HFSSMTQRTVRD--------------------------------KFARLTQMATILNLEK 707

Query: 228  VSEILDFWGENSGPMTWRLTPAEVRRVLSLRIDFRPEAIAALKL 97
            VSEILDFWGENSGPMTWRLTPAEVRRVL LR+DF+PEAIAALKL
Sbjct: 708  VSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 751


>ref|XP_004140637.1| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Cucumis
            sativus]
          Length = 751

 Score =  202 bits (513), Expect = 4e-50
 Identities = 110/164 (67%), Positives = 115/164 (70%)
 Frame = -1

Query: 588  HDVETNIAWLQPLMTANNYDLFVHLVIDFVVKRLEVIMMQKRFSQLGGLQLDRDARALXX 409
            H VETN+AWLQPLMTANNYD FVHLVIDF+VKRLEVIM+QKRFSQLGGLQLDRDARAL  
Sbjct: 620  HAVETNVAWLQPLMTANNYDSFVHLVIDFIVKRLEVIMVQKRFSQLGGLQLDRDARALVS 679

Query: 408  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFARLTQMATILNLEK 229
                                                        KFARLTQMATILNLEK
Sbjct: 680  HFSSMTQRTVRD--------------------------------KFARLTQMATILNLEK 707

Query: 228  VSEILDFWGENSGPMTWRLTPAEVRRVLSLRIDFRPEAIAALKL 97
            VSEILDFWGENSGPMTWRLTPAEVRRVL LR+DF+PEAIAALKL
Sbjct: 708  VSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 751


>ref|XP_002302674.1| predicted protein [Populus trichocarpa] gi|222844400|gb|EEE81947.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  201 bits (512), Expect = 6e-50
 Identities = 109/164 (66%), Positives = 114/164 (69%)
 Frame = -1

Query: 588 HDVETNIAWLQPLMTANNYDLFVHLVIDFVVKRLEVIMMQKRFSQLGGLQLDRDARALXX 409
           H VETN++WLQPLMTANNYD FVHLVIDF+VKRLEVIMMQKRFSQLGGLQLDRD RAL  
Sbjct: 46  HSVETNVSWLQPLMTANNYDSFVHLVIDFIVKRLEVIMMQKRFSQLGGLQLDRDVRALVS 105

Query: 408 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFARLTQMATILNLEK 229
                                                       KFARLTQMATILNLEK
Sbjct: 106 HFSSMTQRTVRD--------------------------------KFARLTQMATILNLEK 133

Query: 228 VSEILDFWGENSGPMTWRLTPAEVRRVLSLRIDFRPEAIAALKL 97
           VSEILDFWGENSGPMTWRLTPAEVRRVL LR+DF+PEAIAALKL
Sbjct: 134 VSEILDFWGENSGPMTWRLTPAEVRRVLGLRVDFKPEAIAALKL 177


>ref|XP_002267721.2| PREDICTED: conserved oligomeric Golgi complex subunit 4-like [Vitis
            vinifera]
          Length = 1105

 Score =  197 bits (502), Expect = 8e-49
 Identities = 108/164 (65%), Positives = 112/164 (68%)
 Frame = -1

Query: 588  HDVETNIAWLQPLMTANNYDLFVHLVIDFVVKRLEVIMMQKRFSQLGGLQLDRDARALXX 409
            H VETN  WLQP+MTANNYD FVHL+IDF+ KRLEVIMMQKRFSQLGGLQLDRDARAL  
Sbjct: 974  HAVETNATWLQPVMTANNYDSFVHLIIDFIAKRLEVIMMQKRFSQLGGLQLDRDARALVH 1033

Query: 408  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKFARLTQMATILNLEK 229
                                                        KFARLTQMATILNLEK
Sbjct: 1034 HFSSMTQRTVRD--------------------------------KFARLTQMATILNLEK 1061

Query: 228  VSEILDFWGENSGPMTWRLTPAEVRRVLSLRIDFRPEAIAALKL 97
            VSEILDFWGENSGPMTWRLTPAEVRRVL LRIDF+PEAIAALKL
Sbjct: 1062 VSEILDFWGENSGPMTWRLTPAEVRRVLGLRIDFKPEAIAALKL 1105


Top